MGE detailed information
MGE type: Genomic_island MGE length: 9554 bp
Accession: NZ_AP026090 Location: 3938921..3948474 Organism: Escherichia coli strain 26_141088 Replicon: chromosome
Accession: NZ_AP026090 Location: 3938921..3948474 Organism: Escherichia coli strain 26_141088 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO788_RS19850 (3934753) | 3934753..3936084 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| OO788_RS19855 (3936106) | 3936106..3937095 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| OO788_RS19860 (3937194) | 3937194..3938132 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| OO788_RS19865 (3938447) | 3938447..3938665 | + | 219 | WP_000033206.1 | transcriptional activator TdcR | - |
| OO788_RS19870 (3938921) | 3938921..3939460 | + | 540 | WP_000675739.1 | protein YhaB | - |
| OO788_RS19875 (3939482) | 3939482..3940669 | + | 1188 | WP_000484640.1 | YhaC family protein | - |
| OO788_RS19885 (3941298) | 3941298..3942443 | - | 1146 | WP_001301934.1 | glycerate 2-kinase | - |
| OO788_RS19890 (3942540) | 3942540..3943430 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| OO788_RS19895 (3943460) | 3943460..3944230 | - | 771 | WP_001058231.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| OO788_RS19900 (3944246) | 3944246..3945580 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| OO788_RS19905 (3945955) | 3945955..3947526 | + | 1572 | WP_001273776.1 | galactarate dehydratase | - |
| OO788_RS19910 (3947675) | 3947675..3948010 | + | 336 | WP_001302819.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| OO788_RS19915 (3948010) | 3948010..3948474 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| OO788_RS19920 (3948529) | 3948529..3949338 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| OO788_RS19925 (3949587) | 3949587..3950867 | + | 1281 | WP_000681927.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| OO788_RS19930 (3950890) | 3950890..3951363 | + | 474 | WP_001301475.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| OO788_RS19935 (3951374) | 3951374..3952153 | + | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| OO788_RS19940 (3952143) | 3952143..3953021 | + | 879 | WP_001295548.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| OO788_RS19945 (3953039) | 3953039..3953473 | + | 435 | WP_000948831.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Genomic island | TA20368 | NC_002695 | 4007011..4017164 | 0.002 |