MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 36062 bp
Accession: NZ_AP026089 Location: 1..36062 Organism: Escherichia coli strain 8_140198 Replicon: plasmid pNIID8_2
Accession: NZ_AP026089 Location: 1..36062 Organism: Escherichia coli strain 8_140198 Replicon: plasmid pNIID8_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO841_RS27930 (CL8NIID8_53570) | 1..1005 | + | 1005 | WP_001208090.1 | replication initiation protein | - |
| OO841_RS27935 (CL8NIID8_53580) | 1357..1695 | - | 339 | WP_000612441.1 | hypothetical protein | VF |
| OO841_RS27940 (CL8NIID8_53590) | 1894..2181 | + | 288 | WP_000332251.1 | helix-turn-helix transcriptional regulator | - |
| OO841_RS27945 (CL8NIID8_53600) | 2222..2455 | - | 234 | WP_001056371.1 | EexN family lipoprotein | - |
| OO841_RS27950 (CL8NIID8_53610) | 2468..3109 | - | 642 | WP_000844300.1 | type IV secretion system protein | - |
| OO841_RS27955 (CL8NIID8_53620) | 3111..4106 | - | 996 | WP_001103652.1 | type IV secretion system protein | - |
| OO841_RS27960 (CL8NIID8_53640) | 4439..5050 | + | 612 | WP_000603937.1 | Type IV secretion system protein virB1 | VF |
| OO841_RS27965 (CL8NIID8_53650) | 5043..5336 | + | 294 | WP_001031683.1 | TrbC/VirB2 family protein | - |
| OO841_RS27970 | 5394..5714 | + | 321 | WP_001000143.1 | VirB3 family type IV secretion system protein | - |
| OO841_RS27975 (CL8NIID8_53660) | 5717..8089 | + | 2373 | WP_001195524.1 | VirB4 family type IV secretion system protein | - |
| OO841_RS27980 (CL8NIID8_53670) | 8220..8957 | + | 738 | WP_000364523.1 | Type IV secretion system protein PtlE | VF |
| OO841_RS27985 (CL8NIID8_53680) | 8954..9733 | + | 780 | WP_000592647.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| OO841_RS27990 (CL8NIID8_53690) | 9723..10865 | + | 1143 | WP_000787413.1 | Type IV secretion system protein virB10 | VF |
| OO841_RS27995 (CL8NIID8_53700) | 10865..11884 | + | 1020 | WP_001287983.1 | Type IV secretion system protein VirB11 | VF |
| OO841_RS28000 (CL8NIID8_53710) | 11935..13902 | + | 1968 | WP_000726938.1 | type IV secretory system conjugative DNA transfer family protein | - |
| OO841_RS28005 (CL8NIID8_53720) | 13918..14223 | + | 306 | WP_001223992.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| OO841_RS28010 (CL8NIID8_53730) | 14364..14951 | + | 588 | WP_000280692.1 | DUF6012 family protein | - |
| OO841_RS28015 (CL8NIID8_53740) | 14963..17119 | + | 2157 | WP_001235741.1 | type IA DNA topoisomerase | - |
| OO841_RS28020 (CL8NIID8_53750) | 17327..17590 | - | 264 | WP_000169312.1 | hypothetical protein | - |
| OO841_RS28025 (CL8NIID8_53760) | 17869..18108 | + | 240 | WP_000118583.1 | hypothetical protein | - |
| OO841_RS28030 (CL8NIID8_53770) | 18608..19564 | + | 957 | WP_001281421.1 | Abi family protein | - |
| OO841_RS28035 | 19674..20444 | - | 771 | WP_000418054.1 | hypothetical protein | - |
| OO841_RS28040 (CL8NIID8_53790) | 20649..20921 | + | 273 | WP_001031147.1 | hypothetical protein | - |
| OO841_RS28045 (CL8NIID8_53800) | 21028..21507 | - | 480 | WP_000179690.1 | hypothetical protein | - |
| OO841_RS28050 (CL8NIID8_53810) | 22345..23160 | + | 816 | WP_000018886.1 | Tyrosine recombinase XerD | VF |
| OO841_RS28055 (CL8NIID8_53820) | 23275..23931 | + | 657 | WP_264831382.1 | peptidyl-arginine deiminase | - |
| OO841_RS28060 (CL8NIID8_53840) | 24636..24938 | + | 303 | WP_001096504.1 | hypothetical protein | - |
| OO841_RS28065 (CL8NIID8_53850) | 25016..28213 | - | 3198 | WP_000586935.1 | hypothetical protein | - |
| OO841_RS28070 (CL8NIID8_53860) | 28210..28545 | - | 336 | WP_000963832.1 | hypothetical protein | Relaxase |
| OO841_RS28075 (CL8NIID8_53880) | 28892..29299 | + | 408 | WP_001190621.1 | hypothetical protein | - |
| OO841_RS28080 (CL8NIID8_53890) | 29309..30070 | + | 762 | WP_001097938.1 | conjugal transfer protein TraL | - |
| OO841_RS28085 (CL8NIID8_53900) | 30067..30771 | + | 705 | WP_001279862.1 | hypothetical protein | - |
| OO841_RS28090 (CL8NIID8_53910) | 30800..31237 | - | 438 | WP_000466317.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| OO841_RS28095 | 31262..31444 | - | 183 | WP_000833471.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| OO841_RS28100 (CL8NIID8_53920) | 31879..32157 | - | 279 | WP_000545933.1 | hypothetical protein | - |
| OO841_RS28105 (CL8NIID8_53930) | 32215..32544 | - | 330 | WP_000855123.1 | hypothetical protein | - |
| OO841_RS28110 (CL8NIID8_53940) | 32983..33225 | - | 243 | WP_001479502.1 | transcriptional regulator | - |
| OO841_RS28115 (CL8NIID8_53950) | 33215..33481 | - | 267 | WP_000868277.1 | hypothetical protein | - |
| OO841_RS28120 (CL8NIID8_53960) | 33532..33756 | - | 225 | WP_000749828.1 | hypothetical protein | - |
| OO841_RS28125 (CL8NIID8_53970) | 33852..34076 | - | 225 | WP_000866040.1 | hypothetical protein | - |
| OO841_RS28130 (CL8NIID8_53980) | 34116..34439 | - | 324 | WP_000432877.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|