MGE detailed information
MGE type: Prophage MGE length: 56836 bp
Accession: NZ_AP026085 Location: 2046882..2103717 Organism: Escherichia coli strain H52_982342 Replicon: chromosome
Accession: NZ_AP026085 Location: 2046882..2103717 Organism: Escherichia coli strain H52_982342 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO840_RS10040 (2043396) | 2043396..2044142 | + | 747 | WP_000636568.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| OO840_RS10045 (2044231) | 2044231..2044917 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| OO840_RS10050 (2045094) | 2045094..2045297 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| OO840_RS10055 (2045333) | 2045333..2046793 | - | 1461 | WP_000527769.1 | mannitol dehydrogenase family protein | - |
| OO840_RS10060 (2046882) | 2046882..2048165 | - | 1284 | Protein_1977 | MHS family MFS transporter YdfJ | - |
| OO840_RS10065 (2048297) | 2048297..2048539 | + | 243 | WP_001120551.1 | DinI-like family protein | - |
| OO840_RS10070 (2048701) | 2048701..2049342 | - | 642 | WP_001143804.1 | DUF1076 domain-containing protein | - |
| OO840_RS10075 (2049424) | 2049424..2050053 | - | 630 | WP_264861844.1 | DUF1076 domain-containing protein | - |
| OO840_RS10080 (2050126) | 2050126..2050701 | - | 576 | WP_001131658.1 | DUF1076 domain-containing protein | - |
| OO840_RS10085 (2050815) | 2050815..2051084 | - | 270 | WP_001023407.1 | phage tail fiber C-terminal domain-containing protein | - |
| OO840_RS10090 (2051086) | 2051086..2052399 | - | 1314 | WP_264861845.1 | prophage tail fiber N-terminal domain-containing protein | - |
| OO840_RS10095 (2052464) | 2052464..2053063 | - | 600 | WP_001230508.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| OO840_RS10100 (2053131) | 2053131..2055698 | - | 2568 | Protein_1985 | host specificity protein J | - |
| OO840_RS10105 (2055698) | 2055698..2057209 | - | 1512 | Protein_1986 | host specificity protein J | - |
| OO840_RS10110 (2057552) | 2057552..2058133 | - | 582 | WP_001089999.1 | tail assembly protein | - |
| OO840_RS10115 (2058130) | 2058130..2058873 | - | 744 | WP_000194720.1 | C40 family peptidase | - |
| OO840_RS10120 (2058884) | 2058884..2059582 | - | 699 | WP_001179510.1 | phage minor tail protein L | - |
| OO840_RS10125 (2059582) | 2059582..2059923 | - | 342 | WP_000807954.1 | phage tail protein | - |
| OO840_RS10130 (2059916) | 2059916..2063158 | - | 3243 | WP_000212925.1 | phage tail tape measure protein | - |
| OO840_RS10135 (2063210) | 2063210..2063419 | - | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| OO840_RS10140 (2063515) | 2063515..2063889 | - | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| OO840_RS10145 (2063895) | 2063895..2064611 | - | 717 | WP_001275508.1 | major tail subunit | - |
| OO840_RS10150 (2064670) | 2064670..2065014 | - | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| OO840_RS10155 (2065011) | 2065011..2065457 | - | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| OO840_RS10160 (2065454) | 2065454..2065804 | - | 351 | WP_001007901.1 | phage head closure protein | - |
| OO840_RS10165 (2065814) | 2065814..2066140 | - | 327 | WP_000125988.1 | head-tail connector protein | - |
| OO840_RS10170 (2066137) | 2066137..2068235 | - | 2099 | Protein_1999 | phage portal protein | - |
| OO840_RS10175 (2068181) | 2068181..2068402 | - | 222 | WP_001063023.1 | hypothetical protein | - |
| OO840_RS10180 (2068447) | 2068447..2070384 | - | 1938 | WP_000173065.1 | phage major capsid protein | - |
| OO840_RS10185 (2070448) | 2070448..2072109 | - | 1662 | WP_001303179.1 | terminase large subunit | - |
| OO840_RS10190 (2072106) | 2072106..2072669 | - | 564 | WP_000958392.1 | terminase small subunit | - |
| OO840_RS10195 (2072959) | 2072959..2073324 | - | 366 | WP_032173279.1 | HNH endonuclease | - |
| OO840_RS10200 (2073366) | 2073366..2073593 | + | 228 | WP_000095736.1 | YlcI/YnfO family protein | - |
| OO840_RS10205 (2074018) | 2074018..2074203 | - | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| OO840_RS10210 (2074431) | 2074431..2074577 | - | 147 | WP_000539792.1 | hypothetical protein | - |
| OO840_RS10215 (2074577) | 2074577..2075146 | - | 570 | WP_001056806.1 | phage antirepressor N-terminal domain-containing protein | - |
| OO840_RS10220 (2075417) | 2075417..2075950 | - | 534 | WP_000992137.1 | lysozyme | - |
| OO840_RS10225 (2076001) | 2076001..2076345 | - | 345 | WP_000731241.1 | YdfR family protein | - |
| OO840_RS10230 (2076350) | 2076350..2076565 | - | 216 | WP_024180155.1 | class II holin family protein | - |
| OO840_RS10235 (2077005) | 2077005..2078855 | - | 1851 | WP_000023202.1 | SASA family carbohydrate esterase | - |
| OO840_RS10240 (2078832) | 2078832..2078975 | + | 144 | Protein_2013 | hypothetical protein | - |
| OO840_RS10245 (2079170) | 2079170..2079337 | - | 168 | WP_000216653.1 | DUF3927 family protein | - |
| OO840_RS10250 (2079334) | 2079334..2079762 | - | 429 | WP_001303509.1 | tellurite resistance protein | - |
| OO840_RS10270 (2080399) | 2080399..2081087 | - | 689 | Protein_2016 | bacteriophage antitermination protein Q | - |
| OO840_RS10275 (2081084) | 2081084..2081443 | - | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| OO840_RS10280 (2081456) | 2081456..2082505 | - | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| OO840_RS10285 (2082507) | 2082507..2082785 | - | 279 | WP_012779366.1 | hypothetical protein | - |
| OO840_RS10290 (2082953) | 2082953..2083108 | - | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| OO840_RS10295 (2083354) | 2083354..2083458 | - | 105 | WP_001278450.1 | hypothetical protein | - |
| OO840_RS10300 (2083574) | 2083574..2084158 | - | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| OO840_RS10305 (2084215) | 2084215..2084610 | - | 396 | WP_001118159.1 | DUF977 family protein | - |
| OO840_RS10310 (2084626) | 2084626..2085395 | - | 770 | Protein_2024 | DUF1627 domain-containing protein | - |
| OO840_RS10315 (2085421) | 2085421..2086161 | - | 741 | WP_000788938.1 | ATP-binding protein | - |
| OO840_RS10320 (2086168) | 2086168..2087130 | - | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| OO840_RS10325 (2087153) | 2087153..2087578 | - | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| OO840_RS10330 (2087575) | 2087575..2087877 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| OO840_RS10335 (2087975) | 2087975..2088346 | + | 372 | WP_001169686.1 | hypothetical protein | - |
| OO840_RS10340 (2088367) | 2088367..2088558 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| OO840_RS10345 (2088560) | 2088560..2088838 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OO840_RS10350 (2089190) | 2089190..2089489 | + | 300 | WP_001240334.1 | hypothetical protein | - |
| OO840_RS10355 (2089561) | 2089561..2089779 | + | 219 | WP_001171930.1 | protein YdfC | - |
| OO840_RS10360 (2090348) | 2090348..2090536 | + | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| OO840_RS10365 (2090533) | 2090533..2090724 | + | 192 | WP_001090200.1 | DUF1482 family protein | - |
| OO840_RS10370 (2090817) | 2090817..2093288 | + | 2472 | WP_000048458.1 | exonuclease | - |
| OO840_RS10375 (2093361) | 2093361..2093612 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| OO840_RS10380 (2093647) | 2093647..2094329 | + | 683 | Protein_2038 | DUF3596 domain-containing protein | - |
| OO840_RS10385 (2094309) | 2094309..2094395 | - | 87 | Protein_2039 | hypothetical protein | - |
| OO840_RS10390 (2094601) | 2094601..2094927 | - | 327 | WP_001302046.1 | YnfA family protein | - |
| OO840_RS10395 (2095062) | 2095062..2095403 | + | 342 | WP_000705189.1 | DUF1283 family protein | - |
| OO840_RS10400 (2095438) | 2095438..2095998 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| OO840_RS10405 (2096001) | 2096001..2096711 | - | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| OO840_RS10410 (2096819) | 2096819..2097124 | + | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| OO840_RS10415 (2097323) | 2097323..2099749 | + | 2427 | WP_000041703.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| OO840_RS10420 (2099810) | 2099810..2102233 | + | 2424 | WP_001414236.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| OO840_RS10425 (2102244) | 2102244..2102861 | + | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| OO840_RS10430 (2102863) | 2102863..2103717 | + | 855 | WP_000526515.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| OO840_RS10435 (2103760) | 2103760..2104374 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| OO840_RS10440 (2104532) | 2104532..2105824 | + | 1293 | WP_071525082.1 | voltage-gated ClC-type chloride channel ClcB | - |
| OO840_RS10445 (2105777) | 2105777..2106472 | - | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| OO840_RS10450 (2106597) | 2106597..2107817 | - | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|