MGE detailed information
MGE type: IS/Tn MGE length: 1173 bp
Accession: NZ_AP025728 Location: 1118919..1120091 Organism: Ligilactobacillus murinus strain YK1 Replicon: chromosome
Accession: NZ_AP025728 Location: 1118919..1120091 Organism: Ligilactobacillus murinus strain YK1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
LmYK1_RS05390 (LmYK1_10800) | 1114837..1115439 | - | 603 | WP_039936077.1 | glycerol-3-phosphate 1-O-acyltransferase PlsY | - |
LmYK1_RS05395 (LmYK1_10810) | 1115534..1115827 | - | 294 | WP_004047845.1 | hypothetical protein | - |
LmYK1_RS05400 (LmYK1_10820) | 1115998..1116825 | + | 828 | WP_172477542.1 | 5'-nucleotidase, lipoprotein e(P4) family | - |
LmYK1_RS05405 (LmYK1_10830) | 1117089..1117364 | - | 276 | WP_172477541.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
LmYK1_RS05410 (LmYK1_10840) | 1117361..1117582 | - | 222 | WP_089135834.1 | DUF6290 family protein | Antitoxin Detail |
LmYK1_RS05415 (LmYK1_10850) | 1117742..1118704 | - | 963 | WP_286294715.1 | IS30 family transposase | - |
LmYK1_RS05420 (LmYK1_10860) | 1118919..1120091 | + | 1173 | WP_004050661.1 | IS256 family transposase IS1542 | Transposase |
LmYK1_RS05425 (LmYK1_10870) | 1120254..1120683 | + | 430 | Protein_1064 | tyrosine-type recombinase/integrase | - |
LmYK1_RS05430 (LmYK1_10880) | 1120955..1121917 | - | 963 | WP_172477239.1 | LD-carboxypeptidase | - |
LmYK1_RS05435 (LmYK1_10890) | 1122021..1122605 | - | 585 | WP_004047695.1 | signal peptidase I | - |
LmYK1_RS05440 (LmYK1_10900) | 1122592..1123425 | - | 834 | WP_004047697.1 | TIM barrel protein | - |
LmYK1_RS05445 (LmYK1_10910) | 1123488..1124351 | - | 864 | WP_004047698.1 | DegV family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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