MGE detailed information
MGE type: Prophage MGE length: 31082 bp
Accession: NZ_AP025693 Location: 882654..913735 Organism: Staphylococcus aureus strain JICS127 Replicon: chromosome
Accession: NZ_AP025693 Location: 882654..913735 Organism: Staphylococcus aureus strain JICS127 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M2038_RS04220 (877755) | 877755..880556 | + | 2802 | WP_001056223.1 | MSCRAMM family adhesin clumping factor ClfA | - |
| M2038_RS04225 (880777) | 880777..882303 | + | 1527 | WP_000791729.1 | von Willebrand factor binding protein Vwb | - |
| M2038_RS04230 (882654) | 882654..883676 | + | 1023 | WP_000728056.1 | extracellular matrix protein-binding adhesin Emp | - |
| M2038_RS04235 (884011) | 884011..884481 | + | 471 | WP_000824472.1 | hypothetical protein | - |
| M2038_RS04240 (884822) | 884822..885508 | + | 687 | WP_001548082.1 | thermonuclease family protein | - |
| M2038_RS04245 (885865) | 885865..886065 | + | 201 | WP_001059082.1 | cold-shock protein | - |
| M2038_RS04250 (886561) | 886561..886779 | - | 219 | WP_000005886.1 | hypothetical protein | - |
| M2038_RS04255 (886841) | 886841..887125 | - | 285 | WP_001004395.1 | hypothetical protein | - |
| M2038_RS04260 (887213) | 887213..887782 | - | 570 | WP_001106654.1 | lipoprotein N-acylation protein LnsA | - |
| M2038_RS04265 (887970) | 887970..888158 | - | 189 | WP_000052078.1 | hypothetical protein | Toxin Detail |
| M2038_RS04270 (888187) | 888187..888447 | - | 261 | WP_001059690.1 | hypothetical protein | Antitoxin Detail |
| M2038_RS04275 (888788) | 888788..888991 | + | 204 | WP_000145163.1 | sterile alpha motif-like domain-containing protein | - |
| M2038_RS04280 (888988) | 888988..889224 | - | 237 | WP_000368687.1 | hypothetical protein | - |
| M2038_RS04285 (889449) | 889449..890030 | + | 582 | WP_001140686.1 | histidine phosphatase family protein | - |
| M2038_RS04290 (890103) | 890103..890720 | - | 618 | WP_000255561.1 | LysE/ArgO family amino acid transporter | - |
| M2038_RS04295 (890875) | 890875..891369 | - | 495 | WP_000569884.1 | GNAT family N-acetyltransferase | - |
| M2038_RS04300 (891768) | 891768..892190 | - | 423 | WP_000974460.1 | organic hydroperoxide resistance protein | - |
| M2038_RS04305 (892338) | 892338..893054 | + | 717 | WP_000150017.1 | type I 3-dehydroquinate dehydratase | - |
| M2038_RS04310 (893137) | 893137..893676 | + | 540 | WP_000422909.1 | nitroreductase | - |
| M2038_RS04315 (893826) | 893826..894146 | - | 321 | WP_001190695.1 | thioredoxin family protein | - |
| M2038_RS04320 (894290) | 894290..894646 | + | 357 | WP_000589549.1 | arsenate reductase family protein | - |
| M2038_RS04325 (894804) | 894804..895184 | + | 381 | WP_000290485.1 | glycine cleavage system protein GcvH | - |
| M2038_RS04330 (895363) | 895363..896241 | + | 879 | WP_000932219.1 | YwqG family protein | - |
| M2038_RS04335 (896983) | 896983..897369 | + | 387 | WP_001018962.1 | toprim domain-containing protein | - |
| M2038_RS04340 (897362) | 897362..897658 | + | 297 | WP_001065801.1 | thioredoxin family protein | - |
| M2038_RS04345 (897908) | 897908..898933 | + | 1026 | WP_000571218.1 | methionine ABC transporter ATP-binding protein | - |
| M2038_RS04350 (898926) | 898926..899621 | + | 696 | WP_000520233.1 | methionine ABC transporter permease | - |
| M2038_RS04355 (899639) | 899639..900460 | + | 822 | WP_000732326.1 | MetQ/NlpA family ABC transporter substrate-binding protein | - |
| M2038_RS04360 (900603) | 900603..901823 | - | 1221 | WP_000266158.1 | site-specific integrase | - |
| M2038_RS04365 (901911) | 901911..902639 | - | 729 | WP_000734020.1 | staphylococcal enterotoxin type K | - |
| M2038_RS04370 (902663) | 902663..903391 | - | 729 | WP_001033321.1 | staphylococcal enterotoxin type Q | - |
| M2038_RS04375 (903408) | 903408..903866 | - | 459 | WP_000281658.1 | ImmA/IrrE family metallo-endopeptidase | - |
| M2038_RS04380 (903878) | 903878..904210 | - | 333 | WP_001260004.1 | helix-turn-helix transcriptional regulator | - |
| M2038_RS04385 (904403) | 904403..904666 | + | 264 | WP_000243849.1 | helix-turn-helix transcriptional regulator | - |
| M2038_RS04390 (904659) | 904659..904931 | + | 273 | WP_000091732.1 | helix-turn-helix domain-containing protein | - |
| M2038_RS04395 (904943) | 904943..905116 | + | 174 | WP_000784892.1 | hypothetical protein | - |
| M2038_RS04400 (905083) | 905083..905286 | + | 204 | WP_001231376.1 | hypothetical protein | - |
| M2038_RS04405 (905288) | 905288..905671 | + | 384 | WP_000403840.1 | hypothetical protein | - |
| M2038_RS04410 (905672) | 905672..905920 | + | 249 | WP_001103959.1 | DUF1474 family protein | - |
| M2038_RS04415 (906012) | 906012..908384 | + | 2373 | WP_000985235.1 | phage/plasmid primase, P4 family | - |
| M2038_RS04420 (909055) | 909055..909399 | + | 345 | WP_001081424.1 | hypothetical protein | - |
| M2038_RS04425 (909624) | 909624..909830 | + | 207 | WP_000884055.1 | hypothetical protein | - |
| M2038_RS04430 (909817) | 909817..910875 | + | 1059 | WP_000657538.1 | phage capsid protein | - |
| M2038_RS04435 (911058) | 911058..911549 | + | 492 | WP_000253084.1 | hypothetical protein | - |
| M2038_RS04440 (911549) | 911549..911701 | + | 153 | Protein_866 | terminase small subunit | - |
| M2038_RS04445 (911748) | 911748..911831 | + | 84 | Protein_867 | terminase small subunit | - |
| M2038_RS04450 (911978) | 911978..912946 | + | 969 | WP_000801979.1 | Abi family protein | - |
| M2038_RS04455 (913181) | 913181..913735 | - | 555 | WP_001035618.1 | DUF4888 domain-containing protein | - |
| M2038_RS04460 (914769) | 914769..914963 | + | 195 | WP_000752917.1 | CsbD family protein | - |
| M2038_RS04465 (915196) | 915196..916047 | - | 852 | WP_001183858.1 | DUF368 domain-containing protein | - |
| M2038_RS04470 (916375) | 916375..917136 | + | 762 | WP_000168845.1 | Fe-S cluster assembly ATPase SufC | - |
| M2038_RS04475 (917234) | 917234..918541 | + | 1308 | WP_000205572.1 | Fe-S cluster assembly protein SufD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|