MGE detailed information
MGE type: Genomic_island MGE length: 12130 bp
Accession: NZ_AP025682 Location: 4021225..4033354 Organism: Escherichia coli strain Rb-50 Replicon: chromosome
Accession: NZ_AP025682 Location: 4021225..4033354 Organism: Escherichia coli strain Rb-50 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EcoliRb_RS19395 () | 4018093..4019034 | - | 942 | WP_000767329.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| EcoliRb_RS19400 () | 4019042..4019260 | - | 219 | WP_001300728.1 | DUF2575 family protein | - |
| EcoliRb_RS19405 () | 4019363..4019626 | + | 264 | WP_001274021.1 | 30S ribosomal protein S20 | - |
| EcoliRb_RS19410 () | 4020110..4021530 | + | 1421 | Protein_3806 | type III secretion system effector EspX1 | - |
| EcoliRb_RS19415 () | 4021831..4022364 | + | 534 | WP_000759928.1 | fimbrial protein | - |
| EcoliRb_RS19420 () | 4022414..4023097 | + | 684 | WP_244331576.1 | putative fimbrial chaperone YehC | VF |
| EcoliRb_RS19425 () | 4023110..4025559 | + | 2450 | Protein_3809 | Outer membrane usher protein YehB | VF |
| EcoliRb_RS19430 () | 4025572..4026519 | + | 948 | WP_244331578.1 | fimbrial family protein | - |
| EcoliRb_RS19435 () | 4026557..4027456 | - | 900 | WP_001300855.1 | transcriptional activator NhaR | - |
| EcoliRb_RS19440 () | 4027522..4028688 | - | 1167 | WP_000681360.1 | Na+/H+ antiporter NhaA | - |
| EcoliRb_RS19445 () | 4028940..4030184 | - | 1245 | WP_244331579.1 | cytoplasmic protein | - |
| EcoliRb_RS19450 () | 4030313..4031806 | - | 1494 | WP_244331581.1 | sulfatase-like hydrolase/transferase | - |
| EcoliRb_RS19455 () | 4031826..4032587 | - | 762 | WP_105495377.1 | outer membrane protein OmpK | - |
| - | 4033096..4033153 | - | 58 | - | - | Antitoxin Detail |
| EcoliRb_RS19460 () | 4033202..4033354 | + | 153 | WP_000809168.1 | type I toxin-antitoxin system toxin MokC | Toxin Detail |
| EcoliRb_RS19465 () | 4033458..4034588 | - | 1131 | WP_001118464.1 | molecular chaperone DnaJ | - |
| EcoliRb_RS19470 () | 4034677..4036593 | - | 1917 | WP_000516135.1 | molecular chaperone DnaK | - |
| EcoliRb_RS19475 () | 4036965..4037369 | + | 405 | WP_001357545.1 | DUF2541 family protein | - |
| EcoliRb_RS19480 () | 4037395..4038108 | + | 714 | WP_001102393.1 | acidic protein MsyB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|