MGE detailed information
MGE type: Prophage MGE length: 57946 bp
Accession: NZ_AP025334 Location: 1973450..2031395 Organism: Phytobacter diazotrophicus strain TA9734 Replicon: chromosome
Accession: NZ_AP025334 Location: 1973450..2031395 Organism: Phytobacter diazotrophicus strain TA9734 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6445_RS09215 (1969018) | 1969018..1969641 | - | 624 | WP_172600637.1 | LuxR C-terminal-related transcriptional regulator | - |
| L6445_RS09220 (1970005) | 1970005..1971783 | - | 1779 | WP_125124249.1 | aminopeptidase P family protein | - |
| L6445_RS09225 (1971802) | 1971802..1973256 | - | 1455 | WP_041851859.1 | AMP nucleosidase | - |
| L6445_RS09230 (1973450) | 1973450..1974379 | - | 930 | WP_232034419.1 | MDR family oxidoreductase | - |
| L6445_RS09235 (1974309) | 1974309..1975129 | - | 821 | Protein_1807 | TetR family transcriptional regulator C-terminal domain-containing protein | - |
| L6445_RS09240 (1975348) | 1975348..1975701 | + | 354 | WP_125124251.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| L6445_RS09245 (1975704) | 1975704..1976006 | + | 303 | WP_071196363.1 | XRE family transcriptional regulator | Antitoxin Detail |
| L6445_RS09250 (1976083) | 1976083..1977033 | + | 951 | WP_041851855.1 | L,D-transpeptidase | - |
| L6445_RS09255 (1977126) | 1977126..1977314 | - | 189 | WP_041851854.1 | YjfB family protein | - |
| L6445_RS09265 (1977912) | 1977912..1978829 | + | 918 | WP_041851853.1 | nitrogen assimilation transcriptional regulator NAC | - |
| L6445_RS09270 (1978931) | 1978931..1979881 | + | 951 | WP_041851852.1 | HTH-type transcriptional regulator Cbl | - |
| L6445_RS09275 (1979933) | 1979933..1980409 | - | 477 | WP_071196365.1 | GNAT family N-acetyltransferase | - |
| L6445_RS09280 (1980501) | 1980501..1981424 | + | 924 | WP_125124252.1 | LysR family transcriptional regulator | - |
| L6445_RS09290 (1981652) | 1981652..1982449 | - | 798 | WP_041851849.1 | DgsA anti-repressor MtfA | - |
| L6445_RS09300 (1982713) | 1982713..1983741 | - | 1029 | WP_172600701.1 | hypothetical protein ; Integrase | Integrase |
| L6445_RS09305 (1983710) | 1983710..1983958 | - | 249 | WP_125124254.1 | DUF4224 domain-containing protein | - |
| L6445_RS09310 (1984029) | 1984029..1986500 | - | 2472 | WP_125124255.1 | exonuclease | - |
| L6445_RS09315 (1986641) | 1986641..1986979 | - | 339 | WP_125124256.1 | Rrf2 family transcriptional regulator | - |
| L6445_RS09320 (1986995) | 1986995..1987330 | - | 336 | WP_237151414.1 | hypothetical protein | - |
| L6445_RS09325 (1987499) | 1987499..1987684 | - | 186 | WP_047369726.1 | DUF1482 family protein | - |
| L6445_RS29345 (1987681) | 1987681..1987803 | - | 123 | WP_255498897.1 | IS21 family transposase ISAfe12 | Transposase |
| L6445_RS09330 (1988126) | 1988126..1988563 | - | 438 | WP_125124258.1 | helix-turn-helix domain-containing protein | - |
| L6445_RS09335 (1988653) | 1988653..1988904 | + | 252 | WP_125124259.1 | YdaS family helix-turn-helix protein | - |
| L6445_RS09340 (1988885) | 1988885..1989439 | + | 555 | WP_125124260.1 | toxin YdaT family protein | - |
| L6445_RS09345 (1989494) | 1989494..1989760 | + | 267 | Protein_1827 | DUF1376 domain-containing protein | - |
| L6445_RS09350 (1989977) | 1989977..1990546 | + | 570 | WP_232034420.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| L6445_RS09355 (1990549) | 1990549..1991289 | + | 741 | WP_125124261.1 | IS21 family transposase ISJsp3 | Transposase |
| L6445_RS09360 (1991309) | 1991309..1991749 | + | 441 | WP_125124262.1 | hypothetical protein | - |
| L6445_RS09365 (1991743) | 1991743..1992054 | + | 312 | WP_125124263.1 | hypothetical protein | - |
| L6445_RS09370 (1992051) | 1992051..1992686 | + | 636 | WP_125124264.1 | hypothetical protein | - |
| L6445_RS09375 (1992683) | 1992683..1993174 | + | 492 | WP_172600639.1 | hypothetical protein | - |
| L6445_RS09380 (1993459) | 1993459..1993839 | + | 381 | Protein_1834 | DUF550 domain-containing protein | - |
| L6445_RS09385 (1993860) | 1993860..1994120 | + | 261 | WP_125124265.1 | hypothetical protein | - |
| L6445_RS09390 (1994117) | 1994117..1996090 | + | 1974 | WP_125124266.1 | DNA cytosine methyltransferase | - |
| L6445_RS09395 (1996847) | 1996847..1997050 | + | 204 | WP_125124267.1 | hypothetical protein | - |
| L6445_RS09400 (1997080) | 1997080..1998078 | + | 999 | WP_125124268.1 | serine protease | - |
| L6445_RS09405 (1998816) | 1998816..1999016 | + | 201 | WP_125124270.1 | hypothetical protein | - |
| L6445_RS09410 (1999019) | 1999019..1999387 | + | 369 | WP_125124271.1 | RusA family crossover junction endodeoxyribonuclease | - |
| L6445_RS09415 (1999372) | 1999372..2000397 | + | 1026 | WP_125124272.1 | DUF968 domain-containing protein | - |
| L6445_RS09420 (2000414) | 2000414..2000989 | + | 576 | WP_125124273.1 | DUF1133 family protein | - |
| L6445_RS09425 (2001081) | 2001081..2001986 | - | 906 | WP_125124274.1 | hypothetical protein | - |
| L6445_RS09430 (2002221) | 2002221..2002436 | + | 216 | WP_047369739.1 | class II holin family protein | - |
| L6445_RS09435 (2002436) | 2002436..2002972 | + | 537 | WP_125124275.1 | lysozyme | - |
| L6445_RS09440 (2002989) | 2002989..2003201 | + | 213 | WP_125124276.1 | hypothetical protein | - |
| L6445_RS09445 (2003198) | 2003198..2003659 | + | 462 | WP_125124277.1 | lysis protein | - |
| L6445_RS09450 (2003757) | 2003757..2004056 | + | 300 | WP_125124278.1 | hypothetical protein | - |
| L6445_RS09455 (2004125) | 2004125..2004499 | + | 375 | WP_125124279.1 | hypothetical protein | - |
| L6445_RS09460 (2004653) | 2004653..2005390 | + | 738 | WP_125124280.1 | hypothetical protein | - |
| L6445_RS09465 (2005610) | 2005610..2006101 | + | 492 | WP_079497860.1 | DUF1441 family protein | - |
| L6445_RS09470 (2006101) | 2006101..2008221 | + | 2121 | WP_125124281.1 | phage terminase large subunit family protein | - |
| L6445_RS09475 (2008218) | 2008218..2008433 | + | 216 | WP_090089253.1 | hypothetical protein | - |
| L6445_RS09480 (2008433) | 2008433..2009941 | + | 1509 | WP_125124282.1 | phage portal protein | - |
| L6445_RS09485 (2009883) | 2009883..2011898 | + | 2016 | WP_125124283.1 | ATP-dependent Clp protease proteolytic subunit 1 | VF |
| L6445_RS09490 (2011977) | 2011977..2012300 | + | 324 | WP_079497865.1 | DUF2190 family protein | - |
| L6445_RS09495 (2012293) | 2012293..2012568 | + | 276 | WP_079497866.1 | ATP-binding protein | - |
| L6445_RS09500 (2012578) | 2012578..2013135 | + | 558 | WP_125124284.1 | phage tail protein | - |
| L6445_RS09505 (2013132) | 2013132..2013530 | + | 399 | WP_125124285.1 | phage minor tail U family protein | - |
| L6445_RS09510 (2013538) | 2013538..2014269 | + | 732 | WP_125124286.1 | phage tail protein | - |
| L6445_RS09515 (2014282) | 2014282..2014692 | + | 411 | WP_125124287.1 | phage minor tail protein G | - |
| L6445_RS09520 (2014743) | 2014743..2015018 | + | 276 | WP_232034392.1 | phage tail assembly protein T | - |
| L6445_RS09525 (2014999) | 2014999..2017572 | + | 2574 | WP_125124289.1 | phage tail tape measure protein | - |
| L6445_RS09530 (2017575) | 2017575..2017922 | + | 348 | WP_125124290.1 | phage tail protein | - |
| L6445_RS09535 (2017919) | 2017919..2018674 | + | 756 | WP_125124291.1 | phage minor tail protein L | - |
| L6445_RS09540 (2018676) | 2018676..2019386 | + | 711 | WP_125124292.1 | C40 family peptidase | - |
| L6445_RS09545 (2019449) | 2019449..2020003 | + | 555 | WP_197718609.1 | hypothetical protein | - |
| L6445_RS09550 (2020070) | 2020070..2020219 | + | 150 | Protein_1868 | tail assembly protein | - |
| L6445_RS09560 (2021439) | 2021439..2021894 | + | 456 | Protein_1870 | tail assembly protein | - |
| L6445_RS09565 (2021946) | 2021946..2025728 | + | 3783 | WP_125124293.1 | DUF1983 domain-containing protein | - |
| L6445_RS09570 (2025728) | 2025728..2026681 | + | 954 | WP_125124294.1 | DUF6453 family protein | - |
| L6445_RS09575 (2026729) | 2026729..2027868 | + | 1140 | WP_232034394.1 | tail fiber domain-containing protein | - |
| L6445_RS09580 (2027972) | 2027972..2028211 | + | 240 | WP_110295443.1 | hypothetical protein | - |
| L6445_RS09585 (2028211) | 2028211..2028495 | + | 285 | WP_125124295.1 | hypothetical protein | - |
| L6445_RS09590 (2028838) | 2028838..2029914 | - | 1077 | WP_079496393.1 | porin | - |
| L6445_RS09595 (2030694) | 2030694..2031395 | + | 702 | WP_125124296.1 | phosphohydrolase | - |
| L6445_RS09600 (2031414) | 2031414..2031878 | + | 465 | WP_041851846.1 | very short patch repair endonuclease | - |
| L6445_RS09605 (2031882) | 2031882..2032793 | - | 912 | WP_071196369.1 | drug/metabolite exporter YedA | - |
| L6445_RS09610 (2032986) | 2032986..2033897 | + | 912 | WP_071196370.1 | DUF808 domain-containing protein | - |
| L6445_RS09615 (2033977) | 2033977..2034159 | + | 183 | WP_041851843.1 | DUF2158 domain-containing protein | - |
| L6445_RS09620 (2034339) | 2034339..2034797 | + | 459 | WP_038918153.1 | IS200/IS605 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|