MGE detailed information
MGE type: Prophage MGE length: 28877 bp
Accession: NZ_AP025214 Location: 269537..298413 Organism: Escherichia coli strain 2017.09.02CC Replicon: chromosome
Accession: NZ_AP025214 Location: 269537..298413 Organism: Escherichia coli strain 2017.09.02CC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPH32_RS01395 () | 266261..266713 | + | 453 | WP_020678468.1 | dihydroneopterin triphosphate diphosphatase | - |
| LPH32_RS01400 () | 266742..267482 | + | 741 | WP_000907248.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| LPH32_RS01405 () | 267517..268038 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| LPH32_RS01410 () | 268040..268642 | - | 603 | WP_001024932.1 | YebB family permuted papain-like enzyme | - |
| LPH32_RS01415 () | 268713..268778 | + | 66 | WP_010723105.1 | stress response small protein YobI | - |
| LPH32_RS01420 () | 268917..269528 | + | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| LPH32_RS01425 () | 269537..270547 | + | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| LPH32_RS01430 () | 270694..271479 | - | 786 | WP_000571479.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| LPH32_RS01435 () | 271476..272231 | - | 756 | WP_000202996.1 | Zinc import ATP-binding protein ZnuC | VF |
| LPH32_RS01440 () | 272310..273242 | + | 933 | WP_001342995.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| LPH32_RS01445 () | 273258..274580 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| LPH32_RS01450 () | 274699..275670 | + | 972 | WP_000448381.1 | Lipid A biosynthesis myristoyltransferase | VF |
| LPH32_RS01455 () | 275780..276477 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| LPH32_RS01460 () | 276555..276773 | + | 219 | WP_000456431.1 | hypothetical protein | - |
| LPH32_RS01465 () | 276833..278275 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| LPH32_RS01470 () | 278403..279272 | - | 870 | WP_001056706.1 | DNA-binding transcriptional regulator HexR | - |
| LPH32_RS01475 () | 279610..281085 | + | 1476 | WP_000301720.1 | glucose-6-phosphate dehydrogenase | - |
| LPH32_RS01480 () | 281320..283131 | + | 1812 | WP_229436325.1 | phosphogluconate dehydratase | - |
| LPH32_RS01485 () | 283168..283809 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| LPH32_RS01490 () | 283865..285043 | - | 1179 | WP_000173459.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| LPH32_RS01495 () | 285177..285467 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| LPH32_RS01500 () | 285534..285890 | + | 357 | WP_001295500.1 | protein YebF | - |
| LPH32_RS01505 () | 286217..286876 | + | 660 | WP_000024728.1 | tellurite resistance TerB family protein | - |
| LPH32_RS01510 () | 287085..289145 | + | 2061 | WP_053290746.1 | oligopeptidase B | - |
| LPH32_RS01515 () | 289142..289804 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| LPH32_RS01520 () | 289828..290484 | - | 657 | WP_000011653.1 | carbon-nitrogen hydrolase family protein YobB | - |
| LPH32_RS01525 () | 290586..290816 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| LPH32_RS01530 () | 290955..291329 | + | 375 | WP_000168737.1 | CopC domain-containing protein YobA | - |
| LPH32_RS01535 () | 291333..292205 | + | 873 | WP_000879323.1 | copper homeostasis membrane protein CopD | - |
| LPH32_RS01540 () | 292218..292559 | + | 342 | WP_000976472.1 | YebY family protein | - |
| - | 292589..292857 | - | 269 | - | - | Antitoxin Detail |
| - | 292717..292819 | + | 103 | - | - | Toxin Detail |
| LPH32_RS01545 () | 292954..293610 | + | 657 | WP_000812744.1 | protein-serine/threonine phosphatase | - |
| LPH32_RS01550 () | 293611..293802 | - | 192 | WP_001317886.1 | YebW family protein | - |
| LPH32_RS01555 () | 293907..294143 | - | 237 | WP_001295499.1 | YebV family protein | - |
| LPH32_RS01560 () | 294261..295700 | - | 1440 | WP_001317885.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| LPH32_RS01565 () | 295780..298413 | - | 2634 | WP_001306757.1 | hypothetical protein | VF |
| LPH32_RS01570 () | 298382..299665 | - | 1284 | WP_001317883.1 | membrane integrity lipid transport subunit YebS | - |
| LPH32_RS01575 () | 299795..300292 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| LPH32_RS01580 () | 300389..301087 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| LPH32_RS01585 () | 301107..303155 | + | 2049 | WP_053290745.1 | carboxy terminal-processing peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|