MGE detailed information
MGE type: Prophage MGE length: 37961 bp
Accession: NZ_AP025214 Location: 1951035..1988995 Organism: Escherichia coli strain 2017.09.02CC Replicon: chromosome
Accession: NZ_AP025214 Location: 1951035..1988995 Organism: Escherichia coli strain 2017.09.02CC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPH32_RS09720 (1946272) | 1946272..1946766 | + | 495 | WP_001276638.1 | type VI secretion system baseplate subunit TssE | - |
| LPH32_RS09725 (1946782) | 1946782..1948665 | + | 1884 | WP_042102246.1 | type VI secretion system baseplate subunit TssF | - |
| LPH32_RS09730 (1948662) | 1948662..1949657 | + | 996 | WP_052920658.1 | type VI secretion system baseplate subunit TssG | - |
| LPH32_RS09735 (1949668) | 1949668..1950714 | + | 1047 | WP_042105240.1 | type VI secretion system ImpA family N-terminal domain-containing protein | - |
| LPH32_RS09740 (1951035) | 1951035..1952243 | + | 1209 | WP_016236915.1 | Prophage integrase IntA ; Integrase | Integrase |
| LPH32_RS09745 (1952266) | 1952266..1952775 | + | 510 | WP_163455359.1 | hypothetical protein | - |
| LPH32_RS09750 (1952827) | 1952827..1952916 | - | 90 | WP_229436761.1 | hypothetical protein | - |
| LPH32_RS09755 (1953070) | 1953070..1954092 | + | 1023 | WP_000255944.1 | IS21 family transposase IS100kyp | Transposase |
| LPH32_RS09760 (1954089) | 1954089..1954871 | + | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| LPH32_RS09765 (1954922) | 1954922..1955485 | - | 564 | WP_229436689.1 | inovirus Gp2 family protein | - |
| LPH32_RS09770 (1955784) | 1955784..1957310 | - | 1527 | WP_053287316.1 | YfjI family protein | - |
| LPH32_RS09775 (1957335) | 1957335..1957559 | - | 225 | WP_016239813.1 | AlpA family phage regulatory protein | - |
| LPH32_RS09780 (1957663) | 1957663..1959513 | + | 1851 | WP_074526865.1 | hypothetical protein | - |
| LPH32_RS09785 (1960530) | 1960530..1960895 | - | 366 | WP_224164149.1 | hypothetical protein | - |
| LPH32_RS09790 (1961389) | 1961389..1964427 | - | 3039 | WP_229436699.1 | DEAD/DEAH box helicase family protein | - |
| LPH32_RS09795 (1964429) | 1964429..1966300 | - | 1872 | WP_001568525.1 | site-specific DNA-methyltransferase | - |
| LPH32_RS09800 (1966361) | 1966361..1967215 | - | 855 | WP_001568524.1 | DUF4391 domain-containing protein | - |
| LPH32_RS09805 (1967208) | 1967208..1970474 | - | 3267 | WP_053287314.1 | SNF2-related protein | - |
| LPH32_RS24235 (1970489) | 1970489..1970668 | - | 180 | WP_001568522.1 | helix-turn-helix domain-containing protein | - |
| LPH32_RS09815 (1970957) | 1970957..1971239 | + | 283 | Protein_1930 | reverse transcriptase domain-containing protein | - |
| LPH32_RS09820 (1971697) | 1971697..1972572 | + | 876 | WP_024523875.1 | GTPase family protein | - |
| LPH32_RS09825 (1972833) | 1972833..1973546 | + | 714 | WP_021553286.1 | sporulation transcriptional regulator SpoIIID | - |
| LPH32_RS09830 (1973543) | 1973543..1974178 | + | 636 | WP_040220404.1 | hypothetical protein | - |
| LPH32_RS09835 (1974214) | 1974214..1974666 | + | 453 | WP_001020418.1 | hypothetical protein | - |
| LPH32_RS09840 (1974663) | 1974663..1975112 | + | 450 | WP_040220400.1 | IrmA family protein | - |
| LPH32_RS09845 (1975189) | 1975189..1975422 | + | 234 | WP_001614358.1 | DUF905 domain-containing protein | - |
| LPH32_RS09850 (1975542) | 1975542..1976360 | + | 819 | WP_001234406.1 | DUF932 domain-containing protein | - |
| LPH32_RS09855 (1976628) | 1976628..1977098 | + | 471 | WP_000131762.1 | antirestriction protein | - |
| LPH32_RS09860 (1977110) | 1977110..1977589 | + | 480 | WP_000437750.1 | DNA repair protein RadC | - |
| LPH32_RS09865 (1977610) | 1977610..1977831 | + | 222 | WP_000691981.1 | DUF987 domain-containing protein | - |
| LPH32_RS09870 (1977855) | 1977855..1978214 | + | 360 | WP_000066236.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| LPH32_RS09875 (1978265) | 1978265..1978642 | + | 378 | WP_001614355.1 | TA system toxin CbtA family protein | Toxin Detail |
| LPH32_RS09880 (1978639) | 1978639..1979130 | + | 492 | WP_000777682.1 | DUF5983 family protein | - |
| LPH32_RS09885 (1979162) | 1979162..1979365 | + | 204 | WP_000413747.1 | DUF957 domain-containing protein | - |
| LPH32_RS09890 (1979446) | 1979446..1980297 | + | 852 | WP_001614353.1 | DUF4942 domain-containing protein | - |
| LPH32_RS09900 (1980628) | 1980628..1981359 | - | 732 | WP_024185250.1 | DNA polymerase III subunit epsilon | - |
| LPH32_RS09905 (1981424) | 1981424..1981891 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| LPH32_RS09910 (1981888) | 1981888..1982610 | - | 723 | WP_001308373.1 | class I SAM-dependent methyltransferase | - |
| LPH32_RS09915 (1982644) | 1982644..1983399 | + | 756 | WP_053290631.1 | hydroxyacylglutathione hydrolase | - |
| LPH32_RS09920 (1983471) | 1983471..1984829 | + | 1359 | WP_000644685.1 | Membrane-bound lytic murein transglycosylase D | VF |
| LPH32_RS09925 (1984937) | 1984937..1986192 | + | 1256 | WP_101774106.1 | IS3 family transposase ISSen1 | Transposase |
| LPH32_RS09930 (1986193) | 1986193..1986963 | - | 771 | WP_000211711.1 | class I SAM-dependent methyltransferase | - |
| LPH32_RS09935 (1987040) | 1987040..1987840 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| LPH32_RS09940 (1988081) | 1988081..1988995 | + | 915 | WP_042102068.1 | HTH-type transcriptional regulator DmlR | VF |
| LPH32_RS09945 (1988992) | 1988992..1989795 | - | 804 | WP_000997036.1 | 2,5-didehydrogluconate reductase DkgB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|