MGE detailed information
MGE type: Genomic_island MGE length: 28622 bp
Accession: NZ_AP025205 Location: 2737652..2766273 Organism: Escherichia coli strain 2017.04.03CC Replicon: chromosome
Accession: NZ_AP025205 Location: 2737652..2766273 Organism: Escherichia coli strain 2017.04.03CC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPH27_RS13235 (2734004) | 2734004..2735161 | + | 1158 | WP_001070350.1 | glucans biosynthesis protein MdoC | - |
| LPH27_RS13240 (2735169) | 2735169..2736650 | - | 1482 | WP_001307714.1 | cardiolipin synthase ClsC | - |
| LPH27_RS13245 (2736592) | 2736592..2737125 | - | 534 | WP_000857405.1 | O-acetyl-ADP-ribose deacetylase | - |
| LPH27_RS13250 (2737220) | 2737220..2737531 | - | 312 | WP_023281181.1 | protein YmdA | - |
| LPH27_RS13255 (2737652) | 2737652..2737984 | - | 333 | WP_097345301.1 | curli assembly chaperone CsgC | - |
| LPH27_RS13260 (2738043) | 2738043..2738498 | - | 456 | WP_000771437.1 | curli major subunit CsgA | - |
| LPH27_RS13265 (2738539) | 2738539..2738994 | - | 456 | WP_000791650.1 | curli minor subunit CsgB | - |
| LPH27_RS13270 (2739749) | 2739749..2740399 | + | 651 | WP_000481505.1 | biofilm master transcriptional regulator CsgD | - |
| LPH27_RS13275 (2740404) | 2740404..2740793 | + | 390 | WP_000833288.1 | curli production assembly/transport protein CsgE | - |
| LPH27_RS13280 (2740818) | 2740818..2741234 | + | 417 | WP_001264088.1 | curli production assembly/transport protein CsgF | - |
| LPH27_RS13285 (2741261) | 2741261..2742094 | + | 834 | WP_001189321.1 | curli production assembly/transport protein CsgG | - |
| LPH27_RS13290 (2742158) | 2742158..2742649 | - | 492 | WP_001300785.1 | DUF1097 domain-containing protein | - |
| LPH27_RS13295 (2742751) | 2742751..2743305 | - | 555 | WP_001001902.1 | molecular chaperone YcdY | - |
| LPH27_RS13300 (2743329) | 2743329..2744066 | - | 738 | WP_000283664.1 | zinc-binding phosphatase | - |
| LPH27_RS13305 (2744121) | 2744121..2745059 | - | 939 | WP_000351315.1 | glyoxylate/hydroxypyruvate reductase GhrA | - |
| LPH27_RS13315 (2745530) | 2745530..2746372 | - | 843 | WP_065304417.1 | DUF4942 domain-containing protein | - |
| LPH27_RS13320 (2746469) | 2746469..2746672 | - | 204 | WP_229266309.1 | hypothetical protein | - |
| LPH27_RS13325 (2746748) | 2746748..2746897 | - | 150 | Protein_2606 | DUF5983 family protein | - |
| LPH27_RS13330 (2746894) | 2746894..2747271 | - | 378 | WP_065304416.1 | type IV toxin-antitoxin system cytoskeleton-binding toxin CbtA | Toxin Detail |
| LPH27_RS13335 (2747361) | 2747361..2747729 | - | 369 | WP_001285390.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| LPH27_RS13340 (2747779) | 2747779..2748423 | - | 645 | WP_065304415.1 | antitoxin of toxin-antitoxin stability system | - |
| LPH27_RS13345 (2748438) | 2748438..2748659 | - | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| LPH27_RS13350 (2748728) | 2748728..2749204 | - | 477 | WP_001186747.1 | RadC family protein | - |
| LPH27_RS13355 (2749219) | 2749219..2749704 | - | 486 | WP_000214317.1 | antirestriction protein | - |
| LPH27_RS13360 (2749795) | 2749795..2750613 | - | 819 | WP_112923394.1 | DUF932 domain-containing protein | - |
| LPH27_RS13365 (2750940) | 2750940..2753786 | - | 2847 | WP_217824376.1 | Ag43/Cah family autotransporter adhesin | - |
| LPH27_RS13370 (2754158) | 2754158..2755030 | - | 873 | WP_112923387.1 | GTPase family protein | - |
| LPH27_RS13375 (2755294) | 2755294..2756850 | + | 1557 | WP_063082116.1 | type I restriction-modification system subunit M | - |
| LPH27_RS13380 (2756847) | 2756847..2758094 | + | 1248 | WP_077861930.1 | restriction endonuclease subunit S | - |
| LPH27_RS13385 (2758216) | 2758216..2761332 | + | 3117 | WP_229266133.1 | HsdR family type I site-specific deoxyribonuclease | - |
| LPH27_RS13395 (2762247) | 2762247..2762648 | - | 402 | Protein_2620 | helix-turn-helix domain-containing protein | - |
| LPH27_RS13400 (2762716) | 2762716..2763609 | + | 894 | Protein_2621 | IS3 family transposase | - |
| LPH27_RS13405 (2763887) | 2763887..2764984 | - | 1098 | WP_059252017.1 | porin | - |
| LPH27_RS13410 (2765293) | 2765293..2766273 | - | 981 | WP_214455430.1 | IS5-like element ISKpn26 family transposase | - |
| LPH27_RS13415 (2766485) | 2766485..2767555 | - | 1071 | WP_000837747.1 | LacI family DNA-binding transcriptional regulator | - |
| LPH27_RS13420 (2767826) | 2767826..2769097 | + | 1272 | WP_001098396.1 | maltoporin | - |
| LPH27_RS13425 (2769234) | 2769234..2769548 | - | 315 | WP_000254058.1 | glucose PTS transporter subunit EIIB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|