MGE detailed information
MGE type: Genomic_island MGE length: 12810 bp
Accession: NZ_AP025205 Location: 2274949..2287758 Organism: Escherichia coli strain 2017.04.03CC Replicon: chromosome
Accession: NZ_AP025205 Location: 2274949..2287758 Organism: Escherichia coli strain 2017.04.03CC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPH27_RS10965 (2270899) | 2270899..2274726 | + | 3828 | Protein_2143 | ECSE_1600 family autotransporter | - |
| LPH27_RS10970 (2274949) | 2274949..2275215 | + | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| LPH27_RS10975 (2275215) | 2275215..2276537 | + | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| LPH27_RS10980 (2276849) | 2276849..2277057 | + | 209 | Protein_2146 | AraC family transcriptional regulator | - |
| LPH27_RS10985 (2277312) | 2277312..2278538 | + | 1227 | Protein_2147 | fimbria/pilus outer membrane usher protein | - |
| LPH27_RS10990 (2278552) | 2278552..2279082 | + | 531 | WP_000876763.1 | fimbrial protein | - |
| LPH27_RS10995 (2279095) | 2279095..2279598 | + | 504 | WP_000825452.1 | fimbrial protein | - |
| LPH27_RS11000 (2279657) | 2279657..2280571 | + | 915 | WP_000520676.1 | fimbrial protein | - |
| LPH27_RS11005 (2280905) | 2280905..2283184 | + | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| LPH27_RS11010 (2283432) | 2283432..2283629 | + | 198 | WP_000543384.1 | two-component system connector SafA | - |
| LPH27_RS11015 (2283704) | 2283704..2284465 | + | 762 | WP_000060493.1 | acid stress response transcriptional regulator YdeO | - |
| LPH27_RS11020 (2284867) | 2284867..2286549 | + | 1683 | WP_001515303.1 | sulfatase | - |
| LPH27_RS11025 (2286601) | 2286601..2287758 | + | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| LPH27_RS11030 (2287724) | 2287724..2287846 | - | 123 | WP_120795387.1 | protein YneP | - |
| LPH27_RS11035 (2288049) | 2288049..2289734 | + | 1686 | WP_024238759.1 | ABC transporter ATP-binding protein/permease | - |
| LPH27_RS11040 (2289772) | 2289772..2292144 | + | 2373 | WP_024238758.1 | TonB-dependent receptor plug domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.006 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.006 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.005 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22685 | NC_010473 | 1669461..1680091 | 0.007 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.006 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.006 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.006 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.006 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.006 |