MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 131441 bp
Accession: NZ_AP025015 Location: 1..131441 Organism: Shewanella xiamenensis strain NUITM-VS1 Replicon: plasmid pNUITM-VS1_1
Accession: NZ_AP025015 Location: 1..131441 Organism: Shewanella xiamenensis strain NUITM-VS1 Replicon: plasmid pNUITM-VS1_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDO18_RS22665 (NUITMVS1_44460) | 1..1218 | + | 1218 | WP_224022268.1 | AAA family ATPase | - |
| LDO18_RS22670 (NUITMVS1_44470) | 1208..2284 | + | 1077 | WP_224022269.1 | hypothetical protein | - |
| LDO18_RS22675 (NUITMVS1_44480) | 2701..3048 | - | 348 | WP_224022270.1 | hypothetical protein | - |
| LDO18_RS22680 (NUITMVS1_44490) | 3063..4325 | - | 1263 | WP_224022271.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| LDO18_RS22685 (NUITMVS1_44500) | 4605..5432 | + | 828 | WP_140906692.1 | hypothetical protein | - |
| LDO18_RS22690 (NUITMVS1_44510) | 5432..6160 | + | 729 | WP_224022272.1 | TraV family lipoprotein | - |
| LDO18_RS22695 (NUITMVS1_44520) | 6173..8857 | + | 2685 | WP_011711555.1 | TraC family protein | - |
| LDO18_RS22700 (NUITMVS1_44530) | 8888..9610 | - | 723 | WP_224022273.1 | HDOD domain-containing protein | - |
| LDO18_RS22705 (NUITMVS1_44540) | 9739..10230 | + | 492 | WP_224022274.1 | hypothetical protein | - |
| LDO18_RS22710 (NUITMVS1_44550) | 10299..12293 | + | 1995 | WP_224022275.1 | helicase-related protein | - |
| LDO18_RS22715 (NUITMVS1_44560) | 12349..13254 | + | 906 | WP_011711551.1 | thioredoxin fold domain-containing protein | - |
| LDO18_RS22720 (NUITMVS1_44580) | 13440..17684 | + | 4245 | WP_224022276.1 | Ig-like domain-containing protein | - |
| LDO18_RS22725 (NUITMVS1_44590) | 17820..18281 | + | 462 | WP_011711549.1 | DUF2384 domain-containing protein | - |
| LDO18_RS22730 (NUITMVS1_44600) | 18278..18730 | + | 453 | WP_011711548.1 | RES family NAD+ phosphorylase | - |
| LDO18_RS22735 (NUITMVS1_44610) | 18872..19297 | - | 426 | WP_224022277.1 | hypothetical protein | - |
| LDO18_RS22740 | 19372..19878 | + | 507 | WP_037426844.1 | S26 family signal peptidase | - |
| LDO18_RS22745 (NUITMVS1_44630) | 19916..21154 | + | 1239 | WP_224022278.1 | TrbC family F-type conjugative pilus assembly protein | - |
| LDO18_RS22750 (NUITMVS1_44640) | 21151..22302 | + | 1152 | WP_181159871.1 | TraU family protein | - |
| LDO18_RS22755 (NUITMVS1_44650) | 22305..26579 | + | 4275 | WP_224022279.1 | conjugal transfer protein TraN | - |
| LDO18_RS22760 (NUITMVS1_44660) | 26621..27478 | - | 858 | WP_224022280.1 | hypothetical protein | - |
| LDO18_RS22765 (NUITMVS1_44670) | 27630..29429 | + | 1800 | WP_224022281.1 | ATP-dependent helicase | - |
| LDO18_RS22770 (NUITMVS1_44680) | 29946..30317 | + | 372 | WP_224022282.1 | hypothetical protein | - |
| LDO18_RS22775 (NUITMVS1_44690) | 30626..30823 | + | 198 | WP_224022283.1 | hypothetical protein | - |
| LDO18_RS22780 (NUITMVS1_44710) | 31167..31562 | + | 396 | WP_224022284.1 | hypothetical protein | - |
| LDO18_RS22785 (NUITMVS1_44720) | 31740..32807 | + | 1068 | WP_224022285.1 | DUF3150 domain-containing protein | - |
| LDO18_RS22790 (NUITMVS1_44730) | 32904..33878 | + | 975 | WP_011711538.1 | AAA family ATPase | - |
| LDO18_RS22795 (NUITMVS1_44740) | 33960..35633 | + | 1674 | WP_224022286.1 | hypothetical protein | - |
| LDO18_RS22800 (NUITMVS1_44750) | 35823..36842 | + | 1020 | WP_224022287.1 | toprim domain-containing protein | - |
| LDO18_RS22805 (NUITMVS1_44760) | 36988..37290 | + | 303 | WP_224022288.1 | hypothetical protein | - |
| LDO18_RS22810 (NUITMVS1_44770) | 37618..38049 | + | 432 | WP_224022289.1 | hypothetical protein | - |
| LDO18_RS22815 (NUITMVS1_44780) | 38134..38349 | + | 216 | WP_224022290.1 | hypothetical protein | - |
| LDO18_RS22820 (NUITMVS1_44790) | 38434..38913 | + | 480 | WP_224022291.1 | hypothetical protein | - |
| LDO18_RS22825 (NUITMVS1_44800) | 38988..39275 | + | 288 | WP_224022292.1 | hypothetical protein | - |
| LDO18_RS22830 (NUITMVS1_44810) | 39381..39797 | + | 417 | WP_224022293.1 | hypothetical protein | - |
| LDO18_RS22835 (NUITMVS1_44820) | 40044..41417 | + | 1374 | WP_224022294.1 | DNA cytosine methyltransferase | - |
| LDO18_RS22840 (NUITMVS1_44830) | 41520..41951 | + | 432 | WP_037429956.1 | hypothetical protein | - |
| LDO18_RS22845 (NUITMVS1_44850) | 42460..42687 | + | 228 | WP_224022295.1 | 2Fe-2S iron-sulfur cluster-binding protein | - |
| LDO18_RS22850 (NUITMVS1_44860) | 42759..43199 | + | 441 | WP_224022296.1 | hypothetical protein | - |
| LDO18_RS22855 (NUITMVS1_44870) | 43328..43582 | + | 255 | WP_224022297.1 | hypothetical protein | - |
| LDO18_RS22860 (NUITMVS1_44880) | 43747..44400 | - | 654 | WP_224022298.1 | hypothetical protein | - |
| LDO18_RS22865 (NUITMVS1_44890) | 44688..45302 | + | 615 | WP_224022299.1 | hypothetical protein | - |
| LDO18_RS22870 | 45299..45763 | + | 465 | WP_037429945.1 | metal-dependent hydrolase | - |
| LDO18_RS22875 (NUITMVS1_44900) | 45766..46281 | + | 516 | WP_224022300.1 | hypothetical protein | - |
| LDO18_RS22880 (NUITMVS1_44910) | 46305..46835 | - | 531 | WP_224022301.1 | hypothetical protein | VF |
| LDO18_RS22885 (NUITMVS1_44920) | 46907..47608 | + | 702 | WP_224022302.1 | hypothetical protein | - |
| LDO18_RS22890 (NUITMVS1_44930) | 47622..47885 | + | 264 | WP_086903610.1 | hypothetical protein | - |
| LDO18_RS22895 (NUITMVS1_44940) | 47963..48685 | + | 723 | WP_224022303.1 | recombinase RecT | - |
| LDO18_RS22900 (NUITMVS1_44950) | 48698..49345 | + | 648 | WP_086903612.1 | recombinase RecT | - |
| LDO18_RS22905 (NUITMVS1_44960) | 49357..50253 | + | 897 | WP_224022304.1 | hypothetical protein | - |
| LDO18_RS22910 (NUITMVS1_44970) | 50276..50584 | + | 309 | WP_224022305.1 | hypothetical protein | - |
| LDO18_RS22915 (NUITMVS1_44980) | 50594..51142 | + | 549 | WP_224022306.1 | HNH endonuclease family protein | - |
| LDO18_RS22920 (NUITMVS1_44990) | 51145..51675 | + | 531 | WP_224022307.1 | hypothetical protein | - |
| LDO18_RS22925 (NUITMVS1_45000) | 51710..52816 | - | 1107 | WP_224022308.1 | hypothetical protein | - |
| LDO18_RS22930 (NUITMVS1_45010) | 53058..53417 | + | 360 | WP_224022309.1 | hypothetical protein | - |
| LDO18_RS22935 (NUITMVS1_45020) | 53585..54304 | + | 720 | WP_224022310.1 | S24 family peptidase | - |
| LDO18_RS22940 (NUITMVS1_45030) | 54301..55548 | + | 1248 | WP_224022311.1 | Y-family DNA polymerase | - |
| LDO18_RS22945 | 55764..56669 | + | 906 | Protein_56 | DNA cytosine methyltransferase | - |
| LDO18_RS22950 | 56795..56944 | + | 150 | WP_224022312.1 | hypothetical protein | - |
| LDO18_RS22955 (NUITMVS1_45070) | 57130..58527 | - | 1398 | WP_224022313.1 | hypothetical protein | - |
| LDO18_RS22960 (NUITMVS1_45080) | 58601..59263 | - | 663 | WP_224022314.1 | hypothetical protein | - |
| LDO18_RS22965 (NUITMVS1_45090) | 59269..59472 | - | 204 | WP_224022315.1 | hypothetical protein | - |
| LDO18_RS22970 (NUITMVS1_45100) | 59647..60795 | - | 1149 | WP_224022316.1 | GIY-YIG nuclease family protein | - |
| LDO18_RS22975 (NUITMVS1_45110) | 60967..61266 | + | 300 | WP_224022317.1 | hypothetical protein | - |
| LDO18_RS22980 (NUITMVS1_45120) | 61579..62445 | + | 867 | WP_224022318.1 | DNA replication terminus site-binding protein | - |
| LDO18_RS22985 (NUITMVS1_45130) | 62540..63142 | + | 603 | WP_224022319.1 | DUF2913 family protein | - |
| LDO18_RS22990 (NUITMVS1_45140) | 63172..63582 | + | 411 | WP_224022320.1 | hypothetical protein | - |
| LDO18_RS22995 (NUITMVS1_45150) | 63631..63831 | + | 201 | WP_224022321.1 | hypothetical protein | - |
| LDO18_RS23000 (NUITMVS1_45160) | 63828..64004 | + | 177 | WP_224022322.1 | hypothetical protein | - |
| LDO18_RS23005 (NUITMVS1_45170) | 64045..64488 | + | 444 | WP_224022323.1 | hypothetical protein | - |
| LDO18_RS23010 (NUITMVS1_45180) | 64503..64772 | + | 270 | WP_224022324.1 | hypothetical protein | - |
| LDO18_RS23015 (NUITMVS1_45190) | 64782..65687 | - | 906 | WP_224022325.1 | hypothetical protein | - |
| LDO18_RS23020 (NUITMVS1_45200) | 65816..66931 | - | 1116 | WP_224022206.1 | tyrosine-type recombinase/integrase | - |
| LDO18_RS23025 (NUITMVS1_45210) | 66909..67493 | - | 585 | WP_224022207.1 | hypothetical protein | - |
| LDO18_RS23030 (NUITMVS1_45220) | 67570..68247 | - | 678 | WP_224022208.1 | hypothetical protein | - |
| LDO18_RS23035 (NUITMVS1_45230) | 68382..69167 | - | 786 | WP_224022209.1 | hypothetical protein | - |
| LDO18_RS23040 (NUITMVS1_45240) | 69167..69535 | - | 369 | WP_224022210.1 | hypothetical protein | - |
| LDO18_RS23045 (NUITMVS1_45250) | 69633..71369 | - | 1737 | WP_224022211.1 | DUF4942 domain-containing protein | - |
| LDO18_RS23050 (NUITMVS1_45260) | 71802..71975 | - | 174 | WP_224022212.1 | hypothetical protein | - |
| LDO18_RS23055 (NUITMVS1_45270) | 72147..72575 | + | 429 | WP_224022213.1 | hypothetical protein | - |
| LDO18_RS23060 (NUITMVS1_45280) | 72720..73292 | + | 573 | WP_224022214.1 | hypothetical protein | - |
| LDO18_RS23065 (NUITMVS1_45290) | 73417..73755 | - | 339 | WP_224022215.1 | hypothetical protein | - |
| LDO18_RS23070 (NUITMVS1_45300) | 73818..77192 | - | 3375 | WP_224022216.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| LDO18_RS23075 (NUITMVS1_45310) | 77356..78504 | + | 1149 | WP_224022217.1 | DGQHR domain-containing protein | - |
| LDO18_RS23080 (NUITMVS1_45320) | 78501..78803 | + | 303 | WP_224022218.1 | hypothetical protein | - |
| LDO18_RS23085 (NUITMVS1_45330) | 78940..79176 | + | 237 | WP_224022219.1 | hypothetical protein | - |
| LDO18_RS23090 (NUITMVS1_45340) | 79220..79567 | + | 348 | WP_224022220.1 | hypothetical protein | - |
| LDO18_RS23095 (NUITMVS1_45350) | 80051..80692 | + | 642 | WP_224022221.1 | site-specific integrase | - |
| LDO18_RS23100 (NUITMVS1_45360) | 80777..81031 | + | 255 | WP_115407250.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| LDO18_RS23105 (NUITMVS1_45370) | 81028..81369 | + | 342 | WP_219640050.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| LDO18_RS23110 (NUITMVS1_45380) | 81384..81668 | + | 285 | WP_140907763.1 | hypothetical protein | - |
| LDO18_RS23115 (NUITMVS1_45390) | 81684..81902 | + | 219 | WP_140907762.1 | hypothetical protein | - |
| LDO18_RS23120 (NUITMVS1_45400) | 81929..82351 | + | 423 | WP_224022222.1 | hypothetical protein | - |
| LDO18_RS23125 (NUITMVS1_45410) | 82413..82670 | + | 258 | WP_224022223.1 | hypothetical protein | - |
| LDO18_RS23130 (NUITMVS1_45430) | 83120..83284 | + | 165 | WP_224022224.1 | hypothetical protein | - |
| LDO18_RS23135 (NUITMVS1_45440) | 83301..83711 | + | 411 | WP_224022225.1 | hypothetical protein | - |
| LDO18_RS23140 (NUITMVS1_45450) | 83724..83918 | + | 195 | WP_224022226.1 | hypothetical protein | - |
| LDO18_RS23145 (NUITMVS1_45460) | 83941..84159 | + | 219 | WP_224022227.1 | hypothetical protein | - |
| LDO18_RS23150 (NUITMVS1_45480) | 84409..84597 | + | 189 | WP_088212943.1 | hypothetical protein | - |
| LDO18_RS23155 (NUITMVS1_45490) | 84620..84820 | + | 201 | WP_088212942.1 | hypothetical protein | - |
| LDO18_RS23160 (NUITMVS1_45510) | 85188..85400 | + | 213 | WP_224022228.1 | hypothetical protein | - |
| LDO18_RS23165 (NUITMVS1_45520) | 85534..85773 | + | 240 | WP_224022229.1 | hypothetical protein | - |
| LDO18_RS23170 (NUITMVS1_45530) | 85845..86309 | + | 465 | WP_224022230.1 | hypothetical protein | - |
| LDO18_RS23175 (NUITMVS1_45540) | 86610..87470 | + | 861 | WP_224022231.1 | hypothetical protein | - |
| LDO18_RS23180 (NUITMVS1_45550) | 87714..90131 | - | 2418 | WP_224022232.1 | Ig-like domain-containing protein | - |
| LDO18_RS23185 (NUITMVS1_45560) | 90142..92523 | - | 2382 | WP_224022233.1 | Ig-like domain-containing protein | - |
| LDO18_RS23190 (NUITMVS1_45570) | 92633..92917 | + | 285 | WP_224022234.1 | hypothetical protein | - |
| LDO18_RS23195 (NUITMVS1_45580) | 92898..93245 | - | 348 | WP_224022235.1 | hypothetical protein | - |
| LDO18_RS23200 (NUITMVS1_45590) | 93433..93732 | + | 300 | WP_224022236.1 | hypothetical protein | - |
| LDO18_RS23205 (NUITMVS1_45600) | 93735..94451 | - | 717 | WP_224022237.1 | hypothetical protein | - |
| LDO18_RS23210 (NUITMVS1_45610) | 94527..95270 | - | 744 | WP_224022238.1 | Outer membrane protein P6 | VF |
| LDO18_RS23215 (NUITMVS1_45620) | 95391..96263 | + | 873 | WP_224022239.1 | DNA replication terminus site-binding protein | - |
| LDO18_RS23220 (NUITMVS1_45630) | 96407..97312 | + | 906 | WP_224022240.1 | hypothetical protein | - |
| LDO18_RS23225 (NUITMVS1_45640) | 97399..97944 | - | 546 | WP_224022241.1 | hypothetical protein | - |
| LDO18_RS23230 (NUITMVS1_45650) | 97958..98848 | - | 891 | WP_224022242.1 | hypothetical protein | - |
| LDO18_RS23235 (NUITMVS1_45660) | 98960..105322 | - | 6363 | WP_224022243.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| LDO18_RS23240 (NUITMVS1_45670) | 105326..106720 | - | 1395 | WP_037426927.1 | conjugal transfer protein TraH | - |
| LDO18_RS23245 (NUITMVS1_45680) | 106717..107712 | - | 996 | WP_224022244.1 | conjugal transfer protein TraF | - |
| LDO18_RS23250 (NUITMVS1_45690) | 107811..108098 | - | 288 | WP_011711605.1 | hypothetical protein | - |
| LDO18_RS23255 (NUITMVS1_45700) | 108107..109174 | - | 1068 | WP_140906551.1 | hypothetical protein | - |
| LDO18_RS23260 (NUITMVS1_45710) | 109891..110310 | + | 420 | WP_224022245.1 | conjugative transfer protein MobI(A/C) | - |
| LDO18_RS23265 (NUITMVS1_45720) | 110320..111039 | + | 720 | WP_224022246.1 | hypothetical protein | - |
| LDO18_RS23270 (NUITMVS1_45730) | 111039..113852 | + | 2814 | WP_224022247.1 | hypothetical protein | Relaxase |
| LDO18_RS23275 (NUITMVS1_45740) | 113845..115719 | + | 1875 | WP_224022248.1 | conjugative transfer system coupling protein TraD | - |
| LDO18_RS23280 (NUITMVS1_45750) | 115732..116367 | + | 636 | WP_224022249.1 | DUF4400 domain-containing protein | - |
| LDO18_RS23285 (NUITMVS1_45760) | 116481..116879 | + | 399 | WP_224022250.1 | hypothetical protein | - |
| LDO18_RS23290 (NUITMVS1_45770) | 116950..117234 | + | 285 | WP_011711597.1 | type IV conjugative transfer system protein TraL | - |
| LDO18_RS23295 (NUITMVS1_45780) | 117244..117900 | + | 657 | WP_224022251.1 | type IV conjugative transfer system protein TraE | - |
| LDO18_RS23300 (NUITMVS1_45790) | 117906..119165 | + | 1260 | WP_224022252.1 | type-F conjugative transfer system secretin TraK | - |
| LDO18_RS23305 (NUITMVS1_45800) | 119167..120525 | + | 1359 | WP_224022253.1 | TraB/VirB10 family protein | - |
| LDO18_RS23310 (NUITMVS1_45810) | 120529..121071 | + | 543 | WP_224022254.1 | hypothetical protein | - |
| LDO18_RS23315 (NUITMVS1_45820) | 121078..121341 | + | 264 | WP_224022255.1 | hypothetical protein | - |
| LDO18_RS23320 (NUITMVS1_45830) | 121351..121653 | + | 303 | WP_224022256.1 | hypothetical protein | - |
| LDO18_RS23325 (NUITMVS1_45840) | 121672..122016 | + | 345 | WP_224022257.1 | hypothetical protein | - |
| LDO18_RS23330 (NUITMVS1_45850) | 122045..122341 | + | 297 | WP_224022258.1 | hypothetical protein | - |
| LDO18_RS23335 (NUITMVS1_45860) | 122433..122921 | + | 489 | WP_224022259.1 | DUF3085 domain-containing protein | - |
| LDO18_RS23340 (NUITMVS1_45870) | 123221..124138 | + | 918 | WP_224022260.1 | hypothetical protein | - |
| LDO18_RS23345 (NUITMVS1_45880) | 124264..124650 | + | 387 | WP_224022261.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LDO18_RS23350 (NUITMVS1_45890) | 124643..124954 | + | 312 | WP_011711574.1 | helix-turn-helix domain-containing protein | - |
| LDO18_RS23355 (NUITMVS1_45900) | 125777..126028 | - | 252 | WP_224022262.1 | hypothetical protein | - |
| LDO18_RS23360 (NUITMVS1_45910) | 126107..126511 | - | 405 | WP_224022263.1 | hypothetical protein | - |
| LDO18_RS23365 (NUITMVS1_45920) | 126664..126945 | - | 282 | WP_224022264.1 | hypothetical protein | - |
| LDO18_RS23370 | 127155..127220 | - | 66 | Protein_141 | GlyGly-CTERM sorting domain-containing protein | - |
| LDO18_RS23375 (NUITMVS1_45930) | 127532..128080 | - | 549 | WP_224022265.1 | single-stranded DNA-binding protein | - |
| LDO18_RS23380 (NUITMVS1_45940) | 128152..128727 | - | 576 | WP_224022266.1 | hypothetical protein | - |
| LDO18_RS23385 (NUITMVS1_45950) | 129380..130546 | + | 1167 | WP_224022267.1 | replication initiation protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|