MGE detailed information
MGE type: Genomic_island MGE length: 15781 bp
Accession: NZ_AP025014 Location: 2758537..2774317 Organism: Shewanella xiamenensis strain NUITM-VS1 Replicon: chromosome
Accession: NZ_AP025014 Location: 2758537..2774317 Organism: Shewanella xiamenensis strain NUITM-VS1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDO18_RS12280 (NUITMVS1_23860) | 2754473..2756002 | - | 1530 | WP_224020611.1 | AAA family ATPase | - |
| LDO18_RS12285 (NUITMVS1_23870) | 2756079..2757623 | - | 1545 | WP_224020612.1 | sigma-54 dependent transcriptional regulator | - |
| LDO18_RS12290 (NUITMVS1_23880) | 2757792..2757947 | - | 156 | WP_224020613.1 | AlpA family phage regulatory protein | - |
| LDO18_RS12295 | 2758197..2758436 | + | 240 | WP_224020614.1 | hypothetical protein | - |
| LDO18_RS12300 (NUITMVS1_23890) | 2758537..2759502 | - | 966 | WP_224020615.1 | hypothetical protein | - |
| LDO18_RS12305 (NUITMVS1_23900) | 2759526..2760227 | - | 702 | WP_224020616.1 | DUF3944 domain-containing protein | - |
| LDO18_RS12310 (NUITMVS1_23910) | 2760610..2760777 | - | 168 | WP_224020617.1 | hypothetical protein | - |
| LDO18_RS12315 (NUITMVS1_23920) | 2760852..2763026 | - | 2175 | WP_224020618.1 | VIT domain-containing protein | - |
| LDO18_RS12320 (NUITMVS1_23930) | 2763004..2763456 | - | 453 | WP_224020619.1 | MerR family transcriptional regulator | - |
| LDO18_RS12325 (NUITMVS1_23940) | 2763792..2764298 | + | 507 | WP_224020620.1 | DNA repair protein RadC | - |
| LDO18_RS12330 (NUITMVS1_23950) | 2764339..2764701 | + | 363 | WP_224020621.1 | hypothetical protein | - |
| LDO18_RS12335 (NUITMVS1_23960) | 2764831..2765187 | + | 357 | WP_224020622.1 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| LDO18_RS12340 (NUITMVS1_23970) | 2765431..2765844 | + | 414 | WP_224020623.1 | DUF2787 domain-containing protein | - |
| LDO18_RS12345 | 2765960..2766263 | + | 304 | Protein_2368 | site-specific integrase | - |
| LDO18_RS12350 (NUITMVS1_23980) | 2766365..2766772 | + | 408 | WP_224020624.1 | DUF2787 domain-containing protein | - |
| LDO18_RS12355 (NUITMVS1_23990) | 2766881..2767447 | + | 567 | WP_028760122.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LDO18_RS12360 (NUITMVS1_24000) | 2767536..2768258 | + | 723 | WP_224020625.1 | lecithin retinol acyltransferase family protein | - |
| LDO18_RS12365 (NUITMVS1_24010) | 2768542..2768826 | + | 285 | WP_011716807.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| LDO18_RS12370 (NUITMVS1_24020) | 2768814..2769107 | + | 294 | WP_172591152.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LDO18_RS12375 (NUITMVS1_24030) | 2769257..2769934 | - | 678 | WP_224020626.1 | inovirus Gp2 family protein | - |
| LDO18_RS12380 (NUITMVS1_24040) | 2770249..2771718 | - | 1470 | WP_224020627.1 | YfjI family protein | - |
| LDO18_RS12385 | 2771756..2771968 | - | 213 | WP_080612395.1 | AlpA family phage regulatory protein | - |
| LDO18_RS12390 (NUITMVS1_24050) | 2772087..2773172 | - | 1086 | WP_224020628.1 | cytoplasmic protein | - |
| LDO18_RS12395 (NUITMVS1_24060) | 2773430..2774317 | - | 888 | WP_224020629.1 | DUF86 domain-containing protein | - |
| LDO18_RS12400 (NUITMVS1_24070) | 2774369..2775604 | - | 1236 | WP_224020630.1 | tyrosine-type recombinase/integrase | - |
| LDO18_RS12410 (NUITMVS1_24080) | 2776252..2778246 | - | 1995 | WP_099458201.1 | nitrate- and nitrite sensing domain-containing protein | - |
| LDO18_RS12415 (NUITMVS1_24090) | 2778502..2779134 | - | 633 | WP_011072194.1 | YchE family NAAT transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|