MGE detailed information
MGE type: IS/Tn MGE length: 1614 bp
Accession: NZ_AP025014 Location: 1595659..1597272 Organism: Shewanella xiamenensis strain NUITM-VS1 Replicon: chromosome
Accession: NZ_AP025014 Location: 1595659..1597272 Organism: Shewanella xiamenensis strain NUITM-VS1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDO18_RS07190 (NUITMVS1_14000) | 1591451..1591711 | + | 261 | WP_055647496.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| LDO18_RS07195 (NUITMVS1_14010) | 1591713..1592072 | + | 360 | WP_224021879.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LDO18_RS07200 (NUITMVS1_14020) | 1592276..1593484 | + | 1209 | WP_224021880.1 | J domain-containing protein | - |
| LDO18_RS07205 (NUITMVS1_14030) | 1593604..1593810 | - | 207 | WP_014610942.1 | hypothetical protein | - |
| LDO18_RS07210 (NUITMVS1_14040) | 1594278..1594694 | - | 417 | WP_224021881.1 | type II toxin-antitoxin system YafO family toxin | - |
| LDO18_RS07215 (NUITMVS1_14050) | 1594706..1595002 | - | 297 | WP_224021882.1 | antitoxin of toxin-antitoxin stability system | - |
| LDO18_RS07220 | 1595111..1595746 | + | 636 | Protein_1389 | IS66 family transposase | - |
| LDO18_RS07225 (NUITMVS1_14070) | 1595659..1597272 | + | 1614 | WP_037431746.1 | IS1634 family transposase ISAs25 | Transposase |
| LDO18_RS07230 (NUITMVS1_14080) | 1597402..1597701 | + | 300 | Protein_1391 | CcdB family protein | - |
| LDO18_RS07235 (NUITMVS1_14090) | 1598056..1599423 | + | 1368 | WP_088212883.1 | HipA domain-containing protein | - |
| LDO18_RS07240 (NUITMVS1_14100) | 1599420..1599800 | + | 381 | WP_086904820.1 | helix-turn-helix transcriptional regulator | - |
| LDO18_RS07245 (NUITMVS1_14110) | 1599964..1600305 | - | 342 | WP_014610889.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| LDO18_RS07250 (NUITMVS1_14120) | 1600302..1600556 | - | 255 | WP_014610888.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| LDO18_RS07255 (NUITMVS1_14140) | 1600912..1601463 | + | 552 | Protein_1396 | GDP-mannose 4,6-dehydratase | - |
| LDO18_RS07260 | 1601535..1601711 | + | 177 | WP_197721152.1 | tyrosine-type recombinase/integrase | - |
| LDO18_RS07265 (NUITMVS1_14150) | 1601789..1601953 | - | 165 | WP_014610884.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|