MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 256991 bp
Accession: NZ_AP024985 Location: 1..256991 Organism: Thermus thermophilus strain JCM10941 Replicon: plasmid pTT27
Accession: NZ_AP024985 Location: 1..256991 Organism: Thermus thermophilus strain JCM10941 Replicon: plasmid pTT27
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDO79_RS11465 (JCM10941_19550) | 748..1935 | + | 1188 | WP_011229142.1 | type III-B CRISPR module RAMP protein Cmr1 | - |
| LDO79_RS10075 (JCM10941_19560) | 1951..2811 | + | 861 | WP_011229141.1 | type III-B CRISPR module RAMP protein Cmr4 | - |
| LDO79_RS10080 (JCM10941_19570) | 2815..3159 | + | 345 | WP_011229140.1 | type III-B CRISPR module-associated protein Cmr5 | - |
| LDO79_RS10085 (JCM10941_19580) | 3162..4208 | + | 1047 | WP_011229139.1 | type III-B CRISPR module RAMP protein Cmr6 | - |
| LDO79_RS10090 | 4337..5165 | + | 829 | Protein_5 | IS701 family transposase | - |
| LDO79_RS10095 (JCM10941_19600) | 5388..5648 | + | 261 | WP_024119982.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| LDO79_RS10100 (JCM10941_19610) | 5645..6040 | + | 396 | WP_024119983.1 | type II toxin-antitoxin system VapC family toxin | - |
| LDO79_RS10105 (JCM10941_19620) | 6050..7492 | + | 1443 | WP_164926116.1 | CAP domain-containing protein | - |
| LDO79_RS10110 (JCM10941_19630) | 7792..8568 | - | 777 | WP_011229133.1 | CPBP family intramembrane metalloprotease | - |
| LDO79_RS10115 (JCM10941_19640) | 8591..11941 | - | 3351 | WP_011229132.1 | reverse gyrase | - |
| LDO79_RS10120 (JCM10941_19650) | 12333..12986 | - | 654 | WP_011229131.1 | Transcriptional regulatory protein DpiA | VF |
| LDO79_RS11470 (JCM10941_19660) | 12944..13684 | - | 741 | WP_011229130.1 | Sensor protein CitS | VF |
| LDO79_RS10135 (JCM10941_19670) | 14285..15358 | - | 1074 | WP_224065252.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| LDO79_RS10140 (JCM10941_19680) | 15407..17104 | - | 1698 | WP_011229128.1 | iron ABC transporter permease | - |
| LDO79_RS10145 (JCM10941_19690) | 17114..18190 | - | 1077 | WP_011229127.1 | ABC transporter substrate-binding protein | - |
| LDO79_RS10150 (JCM10941_19710) | 18587..19477 | - | 891 | WP_011229126.1 | 3'-5' exonuclease | - |
| LDO79_RS10155 (JCM10941_19720) | 19674..20168 | + | 495 | WP_081481500.1 | hypothetical protein | - |
| LDO79_RS10160 (JCM10941_19730) | 20182..22848 | + | 2667 | WP_011229124.1 | DUF11 domain-containing protein | - |
| LDO79_RS11475 (JCM10941_19740) | 22966..25659 | + | 2694 | WP_262409785.1 | hypothetical protein | - |
| LDO79_RS10175 (JCM10941_19750) | 25656..31043 | + | 5388 | WP_011229122.1 | hypothetical protein | - |
| LDO79_RS10180 (JCM10941_19760) | 31040..34030 | + | 2991 | WP_011229121.1 | DUF11 domain-containing protein | - |
| LDO79_RS10185 (JCM10941_19770) | 34075..34812 | - | 738 | WP_197525145.1 | hypothetical protein | - |
| LDO79_RS11480 (JCM10941_19780) | 34815..35759 | - | 945 | WP_011229119.1 | DNA methyltransferase | - |
| LDO79_RS10195 (JCM10941_19790) | 37450..38439 | + | 990 | WP_011229118.1 | transcriptional regulator | - |
| LDO79_RS10200 (JCM10941_19800) | 38436..41198 | + | 2763 | WP_011229117.1 | CRISPR-associated helicase/endonuclease Cas3 | - |
| LDO79_RS10205 (JCM10941_19810) | 41248..42756 | + | 1509 | WP_011229116.1 | type I-E CRISPR-associated protein Cse1/CasA | - |
| LDO79_RS10210 (JCM10941_19820) | 42753..43262 | + | 510 | WP_011229115.1 | type I-E CRISPR-associated protein Cse2/CasB | - |
| LDO79_RS10215 (JCM10941_19830) | 43259..44374 | + | 1116 | WP_011229114.1 | type I-E CRISPR-associated protein Cas7/Cse4/CasC | - |
| LDO79_RS10220 (JCM10941_19840) | 44376..45122 | + | 747 | WP_011229113.1 | type I-E CRISPR-associated protein Cas5/CasD | - |
| LDO79_RS10225 (JCM10941_19850) | 45109..45744 | + | 636 | WP_011229112.1 | type I-E CRISPR-associated protein Cas6/Cse3/CasE | - |
| LDO79_RS10230 (JCM10941_19860) | 45754..46731 | + | 978 | WP_011229111.1 | type I-E CRISPR-associated endonuclease Cas1e | - |
| LDO79_RS10235 (JCM10941_19870) | 46685..47062 | + | 378 | WP_164926117.1 | type I-E CRISPR-associated endoribonuclease Cas2e | - |
| LDO79_RS10240 (JCM10941_19880) | 48394..49146 | - | 753 | WP_011229109.1 | 5-oxoprolinase subunit PxpA | - |
| LDO79_RS10245 (JCM10941_19890) | 49174..50019 | - | 846 | WP_011229108.1 | formate dehydrogenase accessory sulfurtransferase FdhD | - |
| LDO79_RS10250 (JCM10941_19900) | 50016..52301 | - | 2286 | WP_011229107.1 | FdhF/YdeP family oxidoreductase | - |
| LDO79_RS10255 (JCM10941_19910) | 52652..53884 | + | 1233 | WP_164926118.1 | LamG domain-containing protein | - |
| LDO79_RS10260 (JCM10941_19920) | 53922..56729 | + | 2808 | WP_224065253.1 | HEAT repeat domain-containing protein | - |
| LDO79_RS10265 (JCM10941_19930) | 57435..58655 | - | 1221 | WP_011228558.1 | IS256 family transposase ISTth4 | Transposase |
| LDO79_RS10270 (JCM10941_19940) | 58662..59054 | - | 393 | Protein_39 | ParA family protein | - |
| LDO79_RS10275 (JCM10941_19950) | 59099..59554 | - | 456 | WP_008633600.1 | PIN domain-containing protein | - |
| LDO79_RS10280 (JCM10941_19960) | 59535..59777 | - | 243 | WP_008633599.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| LDO79_RS10285 (JCM10941_19980) | 60053..60700 | - | 648 | WP_224065233.1 | IS5 family transposase ISTth7 | Transposase |
| LDO79_RS10290 | 60642..60827 | + | 186 | WP_223966770.1 | hypothetical protein | - |
| LDO79_RS10295 (JCM10941_20000) | 61430..61831 | + | 402 | WP_011229099.1 | acyl-CoA thioesterase | - |
| LDO79_RS10300 (JCM10941_20010) | 61812..62786 | + | 975 | WP_024118792.1 | ribonucleotide-diphosphate reductase subunit beta | - |
| LDO79_RS10305 (JCM10941_20020) | 62797..64476 | + | 1680 | WP_011229097.1 | ribonucleoside-diphosphate reductase subunit alpha | - |
| LDO79_RS10310 (JCM10941_20030) | 64606..64950 | - | 345 | WP_224065254.1 | hypothetical protein | - |
| LDO79_RS10315 (JCM10941_20040) | 65176..65739 | + | 564 | WP_011229095.1 | sigma-70 family RNA polymerase sigma factor | - |
| LDO79_RS10320 (JCM10941_20050) | 65729..66346 | + | 618 | WP_011229094.1 | anti-sigma factor | - |
| LDO79_RS10325 (JCM10941_20060) | 66425..67045 | + | 621 | WP_011229093.1 | ferritin-like domain-containing protein | - |
| LDO79_RS10330 (JCM10941_20070) | 67094..67279 | + | 186 | WP_011229092.1 | hypothetical protein | - |
| LDO79_RS10335 (JCM10941_20080) | 67589..68767 | - | 1179 | WP_262409786.1 | di-heme oxidoredictase family protein | - |
| LDO79_RS10345 (JCM10941_20090) | 68916..69365 | - | 450 | WP_011229090.1 | Putative ABC transporter substrate-binding lipoprotein YhfQ | VF |
| LDO79_RS10350 (JCM10941_20100) | 69377..69691 | - | 315 | WP_011229089.1 | hypothetical protein | - |
| LDO79_RS10355 (JCM10941_20110) | 69681..70457 | - | 777 | WP_011229088.1 | Hemin import ATP-binding protein HmuV | VF |
| LDO79_RS10360 (JCM10941_20120) | 70450..71475 | - | 1026 | WP_011229087.1 | Hemin transport system permease protein HmuU | VF |
| LDO79_RS10365 (JCM10941_20130) | 71579..72484 | - | 906 | WP_011229086.1 | Hemin-binding periplasmic protein HmuT | VF |
| LDO79_RS10370 (JCM10941_20140) | 72481..73101 | - | 621 | WP_011229085.1 | DUF3386 family protein | - |
| LDO79_RS10375 (JCM10941_20150) | 73094..73414 | - | 321 | WP_011229084.1 | antibiotic biosynthesis monooxygenase | - |
| LDO79_RS10380 (JCM10941_20160) | 74788..75072 | - | 285 | WP_011174371.1 | CRISPR-associated endonuclease Cas2 | - |
| LDO79_RS10385 (JCM10941_20170) | 75069..76046 | - | 978 | WP_164926120.1 | CRISPR-associated endonuclease Cas1 | - |
| LDO79_RS10390 (JCM10941_20180) | 76037..76603 | - | 567 | WP_024118772.1 | CRISPR-associated protein Cas4 | - |
| LDO79_RS10395 (JCM10941_20190) | 76987..77970 | + | 984 | WP_024118773.1 | WYL domain-containing protein | - |
| LDO79_RS10400 (JCM10941_20200) | 77988..80288 | + | 2301 | WP_011229080.1 | hypothetical protein | - |
| LDO79_RS10405 (JCM10941_20210) | 80290..81171 | + | 882 | WP_011229079.1 | hypothetical protein | - |
| LDO79_RS10410 (JCM10941_20220) | 81173..81964 | + | 792 | WP_224065255.1 | hypothetical protein | - |
| LDO79_RS10415 (JCM10941_20230) | 81931..84384 | + | 2454 | WP_011229077.1 | CRISPR-associated helicase Cas3' | - |
| LDO79_RS10420 (JCM10941_20240) | 84384..85178 | + | 795 | WP_011229076.1 | CRISPR-associated endoribonuclease Cas6 | - |
| LDO79_RS10425 (JCM10941_20250) | 85617..86837 | - | 1221 | WP_011227798.1 | IS256 family transposase ISTth4 | Transposase |
| LDO79_RS10430 (JCM10941_20260) | 86869..87144 | - | 276 | Protein_70 | IS110 family transposase IS1000B | Transposase |
| LDO79_RS10435 (JCM10941_20270) | 87160..87573 | - | 414 | WP_008633012.1 | type II toxin-antitoxin system VapC family toxin | - |
| LDO79_RS10440 (JCM10941_20280) | 87570..87785 | - | 216 | WP_008631365.1 | ribbon-helix-helix protein, CopG family | - |
| LDO79_RS10445 (JCM10941_20290) | 88107..89021 | - | 915 | WP_164926121.1 | hypothetical protein | - |
| LDO79_RS10450 (JCM10941_20300) | 89521..90483 | + | 963 | WP_011229073.1 | recombinase XerD | - |
| LDO79_RS10455 (JCM10941_20310) | 90735..91574 | - | 840 | WP_024119813.1 | alpha/beta hydrolase | - |
| LDO79_RS10460 (JCM10941_20320) | 91585..91767 | - | 183 | WP_011229071.1 | hypothetical protein | - |
| LDO79_RS10465 (JCM10941_20330) | 91786..92562 | - | 777 | WP_011229070.1 | fumarylacetoacetate hydrolase family protein | - |
| LDO79_RS10470 (JCM10941_20340) | 92570..94078 | - | 1509 | WP_011229069.1 | aldehyde dehydrogenase | - |
| LDO79_RS10475 (JCM10941_20350) | 94089..94784 | - | 696 | WP_011229068.1 | fumarylacetoacetate hydrolase family protein | - |
| LDO79_RS10480 (JCM10941_20360) | 94781..94975 | - | 195 | WP_011229067.1 | tautomerase family protein | - |
| LDO79_RS10485 (JCM10941_20370) | 94975..95421 | - | 447 | WP_011229066.1 | DMT family transporter | - |
| LDO79_RS10490 (JCM10941_20380) | 95428..95661 | - | 234 | WP_039457313.1 | hypothetical protein | - |
| LDO79_RS10495 (JCM10941_20390) | 95711..96181 | - | 471 | WP_161791374.1 | flavin reductase family protein | - |
| LDO79_RS10500 (JCM10941_20400) | 96181..97035 | - | 855 | WP_011229064.1 | NAD(P)-dependent oxidoreductase | - |
| LDO79_RS10505 (JCM10941_20410) | 97045..98088 | - | 1044 | WP_011229063.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| LDO79_RS10510 (JCM10941_20420) | 98085..99008 | - | 924 | WP_011229062.1 | acetaldehyde dehydrogenase (acetylating) | - |
| LDO79_RS10515 (JCM10941_20430) | 98992..99783 | - | 792 | WP_224065256.1 | IclR family transcriptional regulator | - |
| LDO79_RS10520 (JCM10941_20440) | 100037..101602 | + | 1566 | WP_011229060.1 | 4-nitrophenol 2-monooxygenase, oxygenase component | VF |
| LDO79_RS10525 (JCM10941_20450) | 101813..102787 | + | 975 | WP_011229059.1 | catechol 2,3-dioxygenase | - |
| LDO79_RS10530 (JCM10941_20470) | 103066..103290 | - | 225 | WP_164926122.1 | hypothetical protein | - |
| LDO79_RS10535 | 103269..104117 | - | 849 | Protein_91 | transposase | - |
| LDO79_RS10540 (JCM10941_20500) | 104336..104611 | + | 276 | WP_011229272.1 | SEL1-like repeat protein | - |
| LDO79_RS10550 (JCM10941_20530) | 105666..105974 | - | 309 | WP_011229270.1 | CopG family antitoxin | - |
| LDO79_RS10555 (JCM10941_20540) | 105975..106247 | - | 273 | WP_011229269.1 | BrnT family toxin | - |
| LDO79_RS10560 (JCM10941_20560) | 106631..106861 | + | 231 | WP_011229268.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| LDO79_RS10565 (JCM10941_20570) | 106858..107262 | + | 405 | WP_011229267.1 | type II toxin-antitoxin system VapC family toxin | - |
| LDO79_RS10570 | 107383..108077 | - | 695 | Protein_98 | helix-turn-helix domain-containing protein | - |
| LDO79_RS10575 (JCM10941_20600) | 108347..109000 | - | 654 | WP_011229264.1 | histidine phosphatase family protein | - |
| LDO79_RS10580 (JCM10941_20610) | 108997..109347 | - | 351 | WP_011229263.1 | DUF6285 domain-containing protein | - |
| LDO79_RS10585 (JCM10941_20620) | 109340..110317 | - | 978 | WP_011229262.1 | phosphotransferase family protein | - |
| LDO79_RS10590 (JCM10941_20630) | 110314..111474 | - | 1161 | WP_011229261.1 | (R)-benzylsuccinyl-CoA dehydrogenase | VF |
| LDO79_RS10595 (JCM10941_20640) | 111487..112248 | - | 762 | WP_011229260.1 | 5-keto-D-gluconate 5-reductase | VF |
| LDO79_RS10600 (JCM10941_20650) | 112248..113192 | - | 945 | WP_011229259.1 | Long-chain-fatty-acid--CoA ligase | VF |
| LDO79_RS10605 (JCM10941_20660) | 113228..113581 | - | 354 | WP_011229258.1 | PaaI family thioesterase | - |
| LDO79_RS10610 (JCM10941_20670) | 113578..114033 | - | 456 | WP_011229257.1 | MaoC/PaaZ C-terminal domain-containing protein | - |
| LDO79_RS10615 (JCM10941_20680) | 114017..114808 | - | 792 | WP_011229256.1 | putative oxidoreductase | VF |
| LDO79_RS10620 (JCM10941_20690) | 114808..115338 | - | 531 | WP_011229255.1 | serine hydrolase domain-containing protein | - |
| LDO79_RS10625 (JCM10941_20700) | 115351..116487 | - | 1137 | WP_011229254.1 | Acyl-CoA dehydrogenase | VF |
| LDO79_RS10630 (JCM10941_20710) | 116474..117049 | - | 576 | WP_011229253.1 | HTH-type transcriptional repressor KstR2 | VF |
| LDO79_RS10635 (JCM10941_20720) | 117497..118660 | - | 1164 | WP_164926104.1 | ATP-binding protein | - |
| LDO79_RS10640 (JCM10941_20730) | 118792..119622 | + | 831 | Protein_112 | IS701 family transposase ISTth8 | Transposase |
| LDO79_RS10645 (JCM10941_20740) | 119700..120425 | + | 726 | WP_224065257.1 | hypothetical protein | - |
| LDO79_RS11485 (JCM10941_20750) | 120447..120644 | - | 198 | WP_011229249.1 | hypothetical protein | - |
| LDO79_RS10655 (JCM10941_20760) | 121056..121256 | - | 201 | WP_011229248.1 | aldehyde ferredoxin oxidoreductase N-terminal domain-containing protein | - |
| LDO79_RS10660 (JCM10941_20770) | 122034..122828 | + | 795 | WP_011229247.1 | carbohydrate deacetylase | - |
| LDO79_RS10665 (JCM10941_20780) | 122842..124094 | + | 1253 | Protein_117 | MFS transporter | - |
| LDO79_RS10670 (JCM10941_20800) | 124097..125821 | + | 1725 | WP_011229244.1 | glycoside hydrolase family 2 TIM barrel-domain containing protein | - |
| LDO79_RS10675 (JCM10941_20810) | 125833..128214 | + | 2382 | WP_164926105.1 | glycoside hydrolase family 31 protein | - |
| LDO79_RS11490 (JCM10941_20820) | 128211..129947 | + | 1737 | WP_011229242.1 | glycoside hydrolase family 2 TIM barrel-domain containing protein | - |
| LDO79_RS10690 (JCM10941_20830) | 129926..130258 | + | 333 | WP_224065245.1 | hypothetical protein | - |
| LDO79_RS10695 (JCM10941_20840) | 130258..131520 | + | 1263 | WP_011229240.1 | MFS transporter | - |
| LDO79_RS10700 (JCM10941_20850) | 131866..134481 | - | 2616 | WP_164926106.1 | BTAD domain-containing putative transcriptional regulator | - |
| LDO79_RS10705 (JCM10941_20870) | 135154..136428 | + | 1275 | WP_011174342.1 | hypothetical protein | VF |
| LDO79_RS10710 (JCM10941_20880) | 136428..136877 | + | 450 | WP_011174341.1 | YbjN domain-containing protein | - |
| LDO79_RS10715 (JCM10941_20890) | 136886..137581 | + | 696 | WP_011229238.1 | hypothetical protein | - |
| LDO79_RS10720 (JCM10941_20900) | 137641..139164 | + | 1524 | WP_224065246.1 | hypothetical protein | - |
| LDO79_RS10725 (JCM10941_20910) | 139498..140820 | - | 1323 | WP_011229236.1 | cobyrinate a,c-diamide synthase | - |
| LDO79_RS10730 (JCM10941_20920) | 140820..141383 | - | 564 | WP_011229235.1 | cob(I)yrinic acid a,c-diamide adenosyltransferase | - |
| LDO79_RS10735 (JCM10941_20930) | 141415..142248 | - | 834 | WP_011229234.1 | hypothetical protein | - |
| LDO79_RS10740 (JCM10941_20940) | 142253..142975 | - | 723 | WP_008631386.1 | adenosylcobinamide-GDP ribazoletransferase | - |
| LDO79_RS10745 (JCM10941_20950) | 142976..144784 | - | 1809 | WP_011229233.1 | hypothetical protein | - |
| LDO79_RS10750 (JCM10941_20960) | 144807..145814 | - | 1008 | WP_008631396.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | - |
| LDO79_RS10755 (JCM10941_20970) | 145841..146374 | + | 534 | WP_011229232.1 | histidine phosphatase family protein | - |
| LDO79_RS10760 (JCM10941_20980) | 146639..147301 | + | 663 | WP_011174545.1 | nickel permease | - |
| LDO79_RS10765 (JCM10941_20990) | 147298..148398 | + | 1101 | WP_008631402.1 | cobalt-precorrin-5B (C(1))-methyltransferase | - |
| LDO79_RS10770 (JCM10941_21000) | 148391..149089 | + | 699 | WP_011174544.1 | precorrin-8X methylmutase | - |
| LDO79_RS10775 (JCM10941_21010) | 149090..150301 | + | 1212 | WP_008631406.1 | bifunctional cobalt-precorrin-7 (C(5))-methyltransferase/cobalt-precorrin-6B (C(15))-methyltransferase | - |
| LDO79_RS10780 (JCM10941_21020) | 150298..150969 | + | 672 | WP_011229230.1 | precorrin-2 C(20)-methyltransferase | - |
| LDO79_RS10785 (JCM10941_21030) | 150966..151709 | + | 744 | WP_008631410.1 | cobalt-precorrin-4/precorrin-4 C(11)-methyltransferase | - |
| LDO79_RS10790 (JCM10941_21040) | 151714..152601 | + | 888 | WP_011229229.1 | precorrin-3B C(17)-methyltransferase | - |
| LDO79_RS10795 (JCM10941_21050) | 152594..153673 | + | 1080 | WP_011229228.1 | cobalamin biosynthesis protein | - |
| LDO79_RS10800 (JCM10941_21060) | 153670..154773 | + | 1104 | WP_011229227.1 | CbiX/SirB N-terminal domain-containing protein | - |
| LDO79_RS10805 (JCM10941_21070) | 154774..155136 | + | 363 | WP_011229226.1 | DUF3209 family protein | - |
| LDO79_RS10810 (JCM10941_21080) | 155133..155840 | + | 708 | WP_011174541.1 | uroporphyrinogen-III C-methyltransferase | - |
| LDO79_RS10815 (JCM10941_21090) | 155806..156453 | + | 648 | WP_008631426.1 | 5,6-dimethylbenzimidazole synthase | - |
| LDO79_RS10820 (JCM10941_21100) | 156450..157298 | + | 849 | WP_011174539.1 | adenosylcobinamide-phosphate synthase CbiB | - |
| LDO79_RS10825 (JCM10941_21110) | 157308..157739 | + | 432 | WP_011229225.1 | HEPN domain-containing protein | - |
| LDO79_RS10830 (JCM10941_21120) | 157666..157995 | + | 330 | WP_011174538.1 | nucleotidyltransferase domain-containing protein | - |
| LDO79_RS10835 (JCM10941_21130) | 158041..159039 | + | 999 | WP_164926108.1 | histidinol-phosphate transaminase | - |
| LDO79_RS10840 (JCM10941_21140) | 159124..161142 | + | 2019 | WP_164926109.1 | cobyric acid synthase | - |
| LDO79_RS10845 (JCM10941_21150) | 161139..162644 | - | 1506 | WP_011229222.1 | alkaline phosphatase | - |
| LDO79_RS10850 (JCM10941_21160) | 162819..164852 | - | 2034 | WP_224065247.1 | argonaute PAZ domain-containing protein | - |
| LDO79_RS10855 (JCM10941_21170) | 165054..165455 | + | 402 | WP_008631445.1 | SaoD/DsrE family protein | - |
| LDO79_RS10860 (JCM10941_21180) | 165531..166265 | - | 735 | WP_011229220.1 | 5'/3'-nucleotidase SurE | - |
| LDO79_RS10865 (JCM10941_21190) | 166275..167039 | - | 765 | WP_011229219.1 | sugar phosphate isomerase/epimerase family protein | - |
| LDO79_RS10870 (JCM10941_21200) | 167349..167963 | + | 615 | WP_224065248.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| LDO79_RS10875 (JCM10941_21210) | 167941..168708 | - | 768 | WP_224065249.1 | Transcriptional repressor IclR | VF |
| LDO79_RS10880 (JCM10941_21220) | 168795..169754 | + | 960 | WP_011229216.1 | C4-dicarboxylate TRAP transporter substrate-binding protein | - |
| LDO79_RS10885 (JCM10941_21230) | 169796..170257 | + | 462 | WP_011229215.1 | TRAP transporter small permease | - |
| LDO79_RS10890 (JCM10941_21240) | 170260..171543 | + | 1284 | WP_011229214.1 | TRAP transporter large permease | - |
| LDO79_RS10895 (JCM10941_21250) | 171540..172244 | + | 705 | WP_011229213.1 | 2-keto-3-deoxy-L-fuconate dehydrogenase | VF |
| LDO79_RS10900 (JCM10941_21260) | 172241..173275 | + | 1035 | WP_011229212.1 | putative oxidoreductase YjmC | VF |
| LDO79_RS10905 (JCM10941_21270) | 173268..174197 | + | 930 | WP_011229211.1 | 2-dehydro-3-deoxygluconokinase | - |
| LDO79_RS10910 (JCM10941_21280) | 174207..174926 | + | 720 | WP_011174522.1 | 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase | VF |
| LDO79_RS10915 (JCM10941_21290) | 175144..176136 | + | 993 | WP_011229210.1 | LacI family DNA-binding transcriptional regulator | - |
| LDO79_RS10920 (JCM10941_21300) | 176212..177516 | + | 1305 | WP_011229209.1 | sugar ABC transporter substrate-binding protein | - |
| LDO79_RS10925 (JCM10941_21310) | 177555..178082 | + | 528 | WP_011229208.1 | sugar ABC transporter permease | - |
| LDO79_RS10930 (JCM10941_21320) | 178066..179286 | - | 1221 | WP_011228558.1 | IS256 family transposase ISTth4 | Transposase |
| LDO79_RS10935 (JCM10941_21330) | 179322..179741 | + | 420 | WP_011229207.1 | sugar ABC transporter permease | - |
| LDO79_RS10940 (JCM10941_21340) | 179745..180602 | + | 858 | WP_011174518.1 | carbohydrate ABC transporter permease | - |
| LDO79_RS10945 (JCM10941_21350) | 180624..181919 | + | 1296 | WP_011229206.1 | GH1 family beta-glucosidase | - |
| LDO79_RS10950 (JCM10941_21360) | 181943..182860 | - | 918 | WP_011174516.1 | MBL fold metallo-hydrolase | - |
| LDO79_RS10955 (JCM10941_21370) | 183024..183689 | + | 666 | WP_011229204.1 | DUF4397 domain-containing protein | - |
| LDO79_RS10960 (JCM10941_21380) | 183676..184428 | + | 753 | WP_011229203.1 | methyltransferase domain-containing protein | - |
| LDO79_RS10965 (JCM10941_21390) | 184434..185705 | + | 1272 | WP_164926110.1 | alpha/beta fold hydrolase | - |
| LDO79_RS10970 (JCM10941_21400) | 185620..187023 | - | 1404 | WP_011229201.1 | FAD-dependent oxidoreductase | - |
| LDO79_RS10975 (JCM10941_21410) | 187119..188564 | + | 1446 | WP_164926111.1 | SDR family oxidoreductase | - |
| LDO79_RS10980 (JCM10941_21420) | 188626..189249 | + | 624 | WP_011229199.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| LDO79_RS10985 (JCM10941_21430) | 189251..189781 | + | 531 | WP_011174509.1 | flavin reductase | - |
| LDO79_RS10990 (JCM10941_21440) | 189778..190293 | + | 516 | WP_011229198.1 | YceI family protein | - |
| LDO79_RS10995 | 190304..190513 | - | 210 | WP_011229197.1 | DUF4926 domain-containing protein | - |
| LDO79_RS11000 (JCM10941_21460) | 190686..191549 | - | 864 | WP_011229196.1 | complex I NDUFA9 subunit family protein | - |
| LDO79_RS11005 (JCM10941_21470) | 191550..192137 | - | 588 | WP_011229195.1 | transcriptional regulator LdrP | - |
| LDO79_RS11010 (JCM10941_21480) | 192134..192991 | - | 858 | WP_011229194.1 | HTH-type transcriptional repressor CarH | - |
| LDO79_RS11015 (JCM10941_21490) | 193101..193952 | + | 852 | WP_164926124.1 | phytoene/squalene synthase family protein | - |
| LDO79_RS11020 (JCM10941_21500) | 193952..195214 | + | 1263 | WP_011229192.1 | deoxyribodipyrimidine photo-lyase | - |
| LDO79_RS11025 (JCM10941_21510) | 195400..196569 | + | 1170 | WP_011229191.1 | cytochrome P450 | - |
| LDO79_RS11030 (JCM10941_21520) | 196566..197264 | + | 699 | WP_011174499.1 | lycopene cyclase domain-containing protein | - |
| LDO79_RS11035 (JCM10941_21530) | 197269..197946 | + | 678 | WP_011174498.1 | lysophospholipid acyltransferase family protein | - |
| LDO79_RS11040 (JCM10941_21540) | 197943..198965 | + | 1023 | WP_011174497.1 | glycosyltransferase | - |
| LDO79_RS11045 (JCM10941_21550) | 199019..199279 | + | 261 | WP_011229190.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Toxin Detail |
| LDO79_RS11050 (JCM10941_21560) | 199300..199692 | + | 393 | WP_011229189.1 | type II toxin-antitoxin system VapC family toxin | Antitoxin Detail |
| LDO79_RS11055 (JCM10941_21570) | 199790..201358 | + | 1569 | WP_011229188.1 | phytoene desaturase family protein | - |
| LDO79_RS11060 (JCM10941_21580) | 201355..202353 | + | 999 | WP_011229187.1 | type 2 isopentenyl-diphosphate Delta-isomerase | - |
| LDO79_RS11065 (JCM10941_21590) | 202363..202755 | + | 393 | WP_011174492.1 | nucleotidyltransferase domain-containing protein | - |
| LDO79_RS11070 (JCM10941_21600) | 202786..203733 | - | 948 | WP_011229186.1 | DUF523 and DUF1722 domain-containing protein | - |
| LDO79_RS11075 (JCM10941_21610) | 203730..204518 | - | 789 | WP_011229185.1 | hypothetical protein | - |
| LDO79_RS11080 (JCM10941_21620) | 204598..205647 | - | 1050 | WP_011229184.1 | galactose-1-phosphate uridylyltransferase | - |
| LDO79_RS11085 (JCM10941_21630) | 205631..207061 | - | 1431 | WP_011229183.1 | alpha-galactosidase | - |
| LDO79_RS11090 (JCM10941_21640) | 207193..207336 | - | 144 | WP_011174487.1 | hypothetical protein | - |
| LDO79_RS11095 (JCM10941_21650) | 207333..208958 | - | 1626 | WP_011229182.1 | acyl-CoA dehydrogenase family protein | - |
| LDO79_RS11100 (JCM10941_21660) | 209031..209468 | + | 438 | WP_224065250.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| LDO79_RS11105 (JCM10941_21670) | 209465..209944 | + | 480 | WP_011229180.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| LDO79_RS11110 (JCM10941_21680) | 209956..210885 | + | 930 | WP_011229179.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| LDO79_RS11115 (JCM10941_21690) | 210898..212769 | + | 1872 | WP_011229178.1 | DUF4900 domain-containing protein | - |
| LDO79_RS11120 (JCM10941_21700) | 212935..213285 | - | 351 | WP_164926112.1 | IS200-IS605 family transposase ISBth15 | Transposase |
| LDO79_RS11125 (JCM10941_21710) | 213276..213578 | - | 303 | WP_011229177.1 | IS607 family transposase ISBlo12 | Transposase |
| LDO79_RS11130 (JCM10941_21720) | 213566..213703 | - | 138 | WP_164926113.1 | IS607 family transposase ISCARN56 | Transposase |
| LDO79_RS11495 | 213885..214172 | - | 288 | Protein_210 | chromosome partitioning protein ParB | - |
| LDO79_RS11140 (JCM10941_21750) | 214760..215647 | - | 888 | WP_011229174.1 | ParB/RepB/Spo0J family partition protein | - |
| LDO79_RS11145 (JCM10941_21760) | 215644..216612 | - | 969 | WP_011229173.1 | Chromosome-partitioning ATPase Soj | VF |
| LDO79_RS11150 (JCM10941_21770) | 217123..218514 | - | 1392 | WP_011229172.1 | replication initiator protein A | - |
| LDO79_RS11155 (JCM10941_21780) | 218584..221169 | - | 2586 | WP_011229171.1 | arsenate reductase (azurin) large subunit | - |
| LDO79_RS11160 (JCM10941_21790) | 221181..221663 | - | 483 | WP_011229170.1 | arsenate reductase (azurin) small subunit | - |
| LDO79_RS11165 (JCM10941_21800) | 221741..222961 | - | 1221 | WP_011228558.1 | IS256 family transposase ISTth4 | Transposase |
| LDO79_RS11170 (JCM10941_21810) | 223027..223365 | + | 339 | WP_011229169.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LDO79_RS11175 (JCM10941_21820) | 223386..223553 | + | 168 | WP_164926114.1 | hypothetical protein | - |
| LDO79_RS11180 (JCM10941_21830) | 223784..224335 | + | 552 | WP_011229168.1 | hypothetical protein | - |
| LDO79_RS11185 (JCM10941_21840) | 224345..224875 | + | 531 | WP_011229167.1 | Peptide methionine sulfoxide reductase MsrA 2 | VF |
| LDO79_RS11190 | 224853..225227 | - | 375 | Protein_221 | DUF488 family protein | - |
| LDO79_RS11195 (JCM10941_21860) | 225232..225627 | - | 396 | WP_011229165.1 | hypothetical protein | - |
| LDO79_RS11200 (JCM10941_21870) | 225744..226190 | - | 447 | WP_011229164.1 | type II toxin-antitoxin system VapC family toxin | - |
| LDO79_RS11205 (JCM10941_21880) | 226187..226477 | - | 291 | WP_011229163.1 | ribbon-helix-helix protein, CopG family | - |
| LDO79_RS11210 | 226600..226734 | + | 135 | Protein_225 | ferredoxin | - |
| LDO79_RS11215 (JCM10941_21900) | 226881..227495 | + | 615 | Protein_226 | hypothetical protein | - |
| LDO79_RS11220 (JCM10941_21910) | 227492..227803 | + | 312 | WP_011229161.1 | metal-sulfur cluster assembly factor | - |
| LDO79_RS11225 (JCM10941_21920) | 227897..228043 | + | 147 | WP_024119885.1 | hypothetical protein | - |
| LDO79_RS11230 (JCM10941_21930) | 228080..229324 | + | 1245 | WP_011229160.1 | multidrug effflux MFS transporter | - |
| LDO79_RS11235 (JCM10941_21940) | 229230..230699 | - | 1470 | WP_011229159.1 | Na/Pi cotransporter family protein | - |
| LDO79_RS11240 (JCM10941_21950) | 230701..231375 | - | 675 | WP_011229158.1 | glycerophosphodiester phosphodiesterase | - |
| LDO79_RS11245 (JCM10941_21960) | 231510..232997 | + | 1488 | WP_011229157.1 | glycerol kinase GlpK | - |
| LDO79_RS11250 (JCM10941_21970) | 232997..234529 | + | 1533 | WP_011229156.1 | FAD-dependent oxidoreductase | - |
| LDO79_RS11255 (JCM10941_21980) | 234549..235754 | + | 1206 | WP_011229155.1 | TIGR02710 family CRISPR-associated CARF protein | - |
| LDO79_RS11260 (JCM10941_21990) | 235758..236705 | + | 948 | WP_011229154.1 | CRISPR-associated endonuclease Cas1 | - |
| LDO79_RS11265 | 236778..237017 | - | 240 | WP_164926115.1 | hypothetical protein | - |
| LDO79_RS11270 (JCM10941_22000) | 237269..238222 | - | 954 | WP_011229153.1 | IS110 family transposase IS1000A | Transposase |
| LDO79_RS11275 (JCM10941_22010) | 239432..239704 | + | 273 | WP_011174463.1 | CRISPR-associated endonuclease Cas2 | - |
| LDO79_RS11280 (JCM10941_22020) | 239760..242177 | + | 2418 | WP_011229152.1 | type III-A CRISPR-associated protein Cas10/Csm1 | - |
| LDO79_RS11285 (JCM10941_22030) | 242178..242582 | + | 405 | WP_011174461.1 | type III-A CRISPR-associated protein Csm2 | - |
| LDO79_RS11290 (JCM10941_22040) | 242594..243319 | + | 726 | WP_011229151.1 | type III-A CRISPR-associated RAMP protein Csm3 | - |
| LDO79_RS11295 (JCM10941_22050) | 243329..244204 | + | 876 | WP_011229150.1 | hypothetical protein | - |
| LDO79_RS11300 (JCM10941_22060) | 244201..245355 | + | 1155 | WP_011174458.1 | type III-A CRISPR-associated RAMP protein Csm5 | - |
| LDO79_RS11305 (JCM10941_22070) | 245366..246760 | + | 1395 | WP_011229148.1 | type III-A CRISPR-associated protein Csm6 | - |
| LDO79_RS11500 | 246664..247023 | + | 360 | Protein_245 | hypothetical protein | - |
| LDO79_RS11310 (JCM10941_22090) | 248157..249110 | - | 954 | WP_011228296.1 | IS110 family transposase IS1000B | Transposase |
| LDO79_RS11315 (JCM10941_22100) | 250323..252233 | + | 1911 | WP_011229147.1 | hypothetical protein | - |
| LDO79_RS11320 (JCM10941_22110) | 252204..252725 | - | 522 | WP_011174453.1 | hypothetical protein | - |
| LDO79_RS11325 (JCM10941_22120) | 252730..253449 | - | 720 | WP_011174452.1 | hypothetical protein | - |
| LDO79_RS11330 (JCM10941_22130) | 253418..254383 | - | 966 | WP_011229146.1 | hypothetical protein | - |
| LDO79_RS11335 (JCM10941_22140) | 254376..254786 | - | 411 | WP_011229145.1 | hypothetical protein | - |
| LDO79_RS11340 (JCM10941_22150) | 254913..256667 | + | 1755 | WP_011229144.1 | type III-B CRISPR-associated protein Cas10/Cmr2 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|