MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 116199 bp
Accession: NZ_AP024938 Location: 1..116199 Organism: Thermus thermophilus strain AK1 Replicon: plasmid pAK1b
Accession: NZ_AP024938 Location: 1..116199 Organism: Thermus thermophilus strain AK1 Replicon: plasmid pAK1b
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDO07_RS10655 (TthAK1_20970) | 36..572 | - | 537 | WP_014630524.1 | hypothetical protein | - |
| LDO07_RS10660 (TthAK1_20980) | 577..1299 | - | 723 | WP_223966869.1 | adenosylcobinamide-GDP ribazoletransferase | - |
| LDO07_RS10665 (TthAK1_20990) | 1300..3108 | - | 1809 | WP_143587352.1 | hypothetical protein | - |
| LDO07_RS10670 (TthAK1_21000) | 3131..4138 | - | 1008 | WP_223966871.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | - |
| LDO07_RS10675 (TthAK1_21010) | 4162..4695 | + | 534 | WP_223966879.1 | histidine phosphatase family protein | - |
| LDO07_RS10680 (TthAK1_21020) | 4960..5622 | + | 663 | WP_223966881.1 | nickel permease | - |
| LDO07_RS10685 (TthAK1_21030) | 5619..6719 | + | 1101 | WP_008631402.1 | cobalt-precorrin-5B (C(1))-methyltransferase | - |
| LDO07_RS10690 (TthAK1_21040) | 6712..7410 | + | 699 | WP_223966883.1 | precorrin-8X methylmutase | - |
| LDO07_RS10695 (TthAK1_21050) | 7411..8622 | + | 1212 | WP_223966885.1 | precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE | - |
| LDO07_RS10700 (TthAK1_21060) | 8619..9290 | + | 672 | WP_223966887.1 | precorrin-2 C(20)-methyltransferase | - |
| LDO07_RS10705 (TthAK1_21070) | 9287..10030 | + | 744 | WP_223966889.1 | cobalt-precorrin-4/precorrin-4 C(11)-methyltransferase | - |
| LDO07_RS10710 (TthAK1_21080) | 10035..10898 | + | 864 | WP_126216179.1 | precorrin-3B C(17)-methyltransferase | - |
| LDO07_RS10715 (TthAK1_21090) | 10891..11970 | + | 1080 | WP_223966891.1 | cobalt-precorrin 5A hydrolase | - |
| LDO07_RS10720 (TthAK1_21100) | 11967..13070 | + | 1104 | WP_223966893.1 | CbiX/SirB N-terminal domain-containing protein | - |
| LDO07_RS10725 (TthAK1_21110) | 13071..13433 | + | 363 | WP_143587328.1 | DUF3209 family protein | - |
| LDO07_RS10730 (TthAK1_21120) | 13430..14137 | + | 708 | WP_124105727.1 | uroporphyrinogen-III C-methyltransferase | - |
| LDO07_RS10735 (TthAK1_21130) | 14103..14750 | + | 648 | WP_223966895.1 | 5,6-dimethylbenzimidazole synthase | - |
| LDO07_RS10740 (TthAK1_21140) | 14747..15595 | + | 849 | WP_223966903.1 | adenosylcobinamide-phosphate synthase CbiB | - |
| LDO07_RS10745 (TthAK1_21150) | 15605..16036 | + | 432 | WP_223966905.1 | HEPN domain-containing protein | - |
| LDO07_RS10750 (TthAK1_21160) | 15963..16292 | + | 330 | WP_223966907.1 | nucleotidyltransferase domain-containing protein | - |
| LDO07_RS10755 (TthAK1_21170) | 16338..17336 | + | 999 | WP_223966909.1 | histidinol-phosphate transaminase | - |
| LDO07_RS10760 (TthAK1_21180) | 17333..17662 | + | 330 | WP_223966911.1 | nucleotidyltransferase domain-containing protein | - |
| LDO07_RS10765 (TthAK1_21190) | 17637..18050 | + | 414 | WP_223966913.1 | HEPN domain-containing protein | - |
| LDO07_RS10770 (TthAK1_21200) | 18037..20055 | + | 2019 | WP_223966915.1 | cobyric acid synthase | - |
| LDO07_RS10775 (TthAK1_21210) | 20052..21557 | - | 1506 | WP_223966923.1 | alkaline phosphatase | - |
| LDO07_RS10780 (TthAK1_21220) | 21623..22690 | + | 1068 | WP_223966932.1 | N-acetylglucosamine-6-phosphate deacetylase | - |
| LDO07_RS10785 | 22840..23661 | - | 822 | Protein_27 | NAD(P)-dependent oxidoreductase | - |
| LDO07_RS10790 (TthAK1_21230) | 23770..23916 | - | 147 | WP_223966934.1 | hypothetical protein | - |
| LDO07_RS12045 (TthAK1_21240) | 23923..24447 | - | 525 | WP_014509880.1 | IS630 family transposase ISAtsp4 | Transposase |
| LDO07_RS12050 (TthAK1_21250) | 24444..24965 | - | 522 | WP_244347352.1 | IS630 family transposase ISAtsp4 | Transposase |
| LDO07_RS10800 (TthAK1_21260) | 25015..25860 | - | 846 | WP_223965641.1 | transposase | - |
| LDO07_RS10805 (TthAK1_21270) | 25877..27826 | - | 1950 | WP_223966936.1 | argonaute PAZ domain-containing protein | - |
| LDO07_RS10810 (TthAK1_21280) | 28003..28404 | + | 402 | WP_165739830.1 | SaoD/DsrE family protein | - |
| LDO07_RS10815 (TthAK1_21290) | 28473..29207 | - | 735 | WP_223966943.1 | 5'/3'-nucleotidase SurE | - |
| LDO07_RS10820 (TthAK1_21300) | 29217..29981 | - | 765 | WP_223966946.1 | sugar phosphate isomerase/epimerase family protein | - |
| LDO07_RS10825 (TthAK1_21310) | 30286..30900 | + | 615 | WP_223966948.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| LDO07_RS10830 (TthAK1_21320) | 30878..31645 | - | 768 | WP_223966950.1 | Transcriptional repressor IclR | VF |
| LDO07_RS10835 (TthAK1_21330) | 31732..32691 | + | 960 | WP_223966952.1 | C4-dicarboxylate TRAP transporter substrate-binding protein | - |
| LDO07_RS10840 (TthAK1_21340) | 32733..33194 | + | 462 | WP_165739843.1 | TRAP transporter small permease | - |
| LDO07_RS10845 (TthAK1_21350) | 33197..34468 | + | 1272 | WP_223966954.1 | TRAP transporter large permease | - |
| LDO07_RS10850 (TthAK1_21360) | 34501..35205 | + | 705 | WP_223966956.1 | 2-keto-3-deoxy-L-fuconate dehydrogenase | VF |
| LDO07_RS10855 (TthAK1_21370) | 35202..36236 | + | 1035 | WP_223966958.1 | putative oxidoreductase YjmC | VF |
| LDO07_RS10860 (TthAK1_21380) | 36229..37158 | + | 930 | WP_223966960.1 | 2-dehydro-3-deoxygluconokinase | - |
| LDO07_RS10865 (TthAK1_21390) | 37169..37888 | + | 720 | WP_223966962.1 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | VF |
| LDO07_RS10870 (TthAK1_21400) | 37983..39191 | + | 1209 | WP_165739729.1 | LacI family DNA-binding transcriptional regulator | - |
| LDO07_RS10875 (TthAK1_21410) | 39267..40571 | + | 1305 | WP_143587292.1 | sugar ABC transporter substrate-binding protein | - |
| LDO07_RS10885 (TthAK1_21420) | 40610..41530 | + | 921 | WP_267461260.1 | sugar ABC transporter permease | - |
| LDO07_RS10890 (TthAK1_21430) | 41534..42391 | + | 858 | WP_223966964.1 | carbohydrate ABC transporter permease | - |
| LDO07_RS10895 (TthAK1_21440) | 42413..43708 | + | 1296 | WP_223966966.1 | GH1 family beta-glucosidase | - |
| LDO07_RS10900 (TthAK1_21450) | 43823..44740 | - | 918 | WP_223966968.1 | MBL fold metallo-hydrolase | - |
| LDO07_RS10905 (TthAK1_21460) | 44969..45187 | - | 219 | WP_172596997.1 | DUF4926 domain-containing protein | - |
| LDO07_RS10910 (TthAK1_21470) | 45312..46175 | - | 864 | WP_223966970.1 | complex I NDUFA9 subunit family protein | - |
| LDO07_RS10915 (TthAK1_21480) | 46176..46763 | - | 588 | WP_143587286.1 | transcriptional regulator LdrP | - |
| LDO07_RS10920 (TthAK1_21490) | 46760..47617 | - | 858 | WP_223966972.1 | HTH-type transcriptional repressor CarH | - |
| LDO07_RS10925 (TthAK1_21500) | 47727..48578 | + | 852 | WP_223966991.1 | phytoene/squalene synthase family protein | - |
| LDO07_RS10930 (TthAK1_21510) | 48578..49840 | + | 1263 | WP_223966974.1 | deoxyribodipyrimidine photo-lyase | - |
| LDO07_RS10935 (TthAK1_21520) | 49886..50065 | + | 180 | WP_014511253.1 | hypothetical protein | - |
| LDO07_RS10940 (TthAK1_21530) | 50075..51244 | + | 1170 | WP_223966976.1 | cytochrome P450 | - |
| LDO07_RS10945 (TthAK1_21540) | 51241..51939 | + | 699 | WP_143587276.1 | lycopene cyclase domain-containing protein | - |
| LDO07_RS10950 (TthAK1_21550) | 51944..52621 | + | 678 | WP_223966978.1 | lysophospholipid acyltransferase family protein | - |
| LDO07_RS10955 (TthAK1_21560) | 52618..53640 | + | 1023 | WP_223966980.1 | glycosyltransferase family A protein | - |
| LDO07_RS10960 (TthAK1_21570) | 53694..53954 | + | 261 | WP_011229190.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Toxin Detail |
| LDO07_RS10965 (TthAK1_21580) | 53975..54367 | + | 393 | WP_008631493.1 | type II toxin-antitoxin system VapC family toxin | Antitoxin Detail |
| LDO07_RS10970 (TthAK1_21590) | 54465..56033 | + | 1569 | WP_223966982.1 | phytoene desaturase family protein | - |
| LDO07_RS10975 (TthAK1_21600) | 56030..57028 | + | 999 | WP_223966984.1 | type 2 isopentenyl-diphosphate Delta-isomerase | - |
| LDO07_RS10980 (TthAK1_21610) | 57038..57430 | + | 393 | WP_011174492.1 | nucleotidyltransferase domain-containing protein | - |
| LDO07_RS10985 (TthAK1_21620) | 57461..58006 | - | 546 | WP_223966987.1 | YbgA family protein | - |
| LDO07_RS10990 | 57990..58217 | - | 228 | Protein_68 | transposase | - |
| LDO07_RS10995 | 58798..59166 | + | 369 | Protein_69 | IS701 family transposase ISAcma37 | Transposase |
| LDO07_RS11000 | 59217..60794 | - | 1578 | WP_223966804.1 | IS607 family transposase ISCbe1 | Transposase |
| LDO07_RS11005 (TthAK1_21660) | 60912..61355 | - | 444 | WP_223966807.1 | DUF523 domain-containing protein | - |
| LDO07_RS11010 (TthAK1_21670) | 61352..62140 | - | 789 | WP_143587263.1 | tryptophan-rich sensory protein | - |
| LDO07_RS11015 (TthAK1_21680) | 62220..63269 | - | 1050 | WP_011174489.1 | galactose-1-phosphate uridylyltransferase | - |
| LDO07_RS11020 (TthAK1_21690) | 63253..64683 | - | 1431 | WP_223966809.1 | alpha-galactosidase | - |
| LDO07_RS11025 (TthAK1_21700) | 64815..64958 | - | 144 | WP_165739689.1 | hypothetical protein | - |
| LDO07_RS11030 (TthAK1_21710) | 64955..66580 | - | 1626 | WP_223966811.1 | acyl-CoA dehydrogenase family protein | - |
| LDO07_RS11035 (TthAK1_21720) | 66656..67093 | + | 438 | WP_223966813.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| LDO07_RS11040 (TthAK1_21730) | 67090..67569 | + | 480 | WP_223966815.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| LDO07_RS11045 (TthAK1_21740) | 67581..68501 | + | 921 | WP_223966817.1 | hypothetical protein | VF |
| LDO07_RS11050 (TthAK1_21750) | 68518..70404 | + | 1887 | WP_223966819.1 | DUF4900 domain-containing protein | - |
| LDO07_RS11055 (TthAK1_21760) | 70526..71257 | + | 732 | Protein_81 | IS1634 family transposase ISTth3 | Transposase |
| LDO07_RS11060 (TthAK1_21770) | 71269..72546 | - | 1278 | WP_223965630.1 | IS256 family transposase ISCsa2 | Transposase |
| LDO07_RS11065 (TthAK1_21780) | 72602..73507 | + | 906 | Protein_83 | IS1634 family transposase ISTth3 | Transposase |
| LDO07_RS11070 (TthAK1_21800) | 74001..74888 | - | 888 | WP_223966821.1 | ParB/RepB/Spo0J family partition protein | - |
| LDO07_RS11075 (TthAK1_21810) | 74885..75853 | - | 969 | WP_011174477.1 | Chromosome-partitioning ATPase Soj | VF |
| LDO07_RS11080 (TthAK1_21820) | 76367..77758 | - | 1392 | WP_223966823.1 | replication initiator protein A | - |
| LDO07_RS11085 (TthAK1_21830) | 77828..78178 | - | 351 | Protein_87 | molybdopterin dinucleotide binding domain-containing protein | - |
| LDO07_RS11090 (TthAK1_21840) | 78186..78386 | + | 201 | WP_041444621.1 | hypothetical protein | - |
| LDO07_RS11095 (TthAK1_21850) | 78383..79480 | - | 1098 | WP_223966825.1 | YwiC-like family protein | - |
| LDO07_RS11100 (TthAK1_21860) | 79524..79901 | - | 378 | WP_223966833.1 | hypothetical protein | - |
| LDO07_RS11105 (TthAK1_21870) | 79898..80194 | - | 297 | WP_014511217.1 | cupin | - |
| LDO07_RS11110 (TthAK1_21880) | 80191..80388 | - | 198 | WP_014511216.1 | DUF542 domain-containing protein | - |
| LDO07_RS11115 (TthAK1_21890) | 80436..80858 | - | 423 | WP_223966841.1 | Rrf2 family transcriptional regulator | - |
| LDO07_RS11120 (TthAK1_21900) | 80988..81653 | + | 666 | WP_014511214.1 | cytochrome c | - |
| LDO07_RS11125 (TthAK1_21910) | 81664..83094 | + | 1431 | WP_014630590.1 | cbb3-type cytochrome c oxidase subunit I | - |
| LDO07_RS11130 (TthAK1_21920) | 83087..83383 | + | 297 | WP_014511212.1 | hypothetical protein | - |
| LDO07_RS11135 (TthAK1_21930) | 83502..83714 | + | 213 | Protein_97 | nitrite reductase | - |
| LDO07_RS11140 (TthAK1_21940) | 83800..84900 | + | 1101 | WP_143584933.1 | IS701 family transposase ISAcma37 | Transposase |
| LDO07_RS11145 (TthAK1_21950) | 84901..85905 | + | 1005 | Protein_99 | IS701 family transposase ISAcma37 | Transposase |
| LDO07_RS11150 (TthAK1_21960) | 85909..86262 | - | 354 | Protein_100 | ribonucleotide-diphosphate reductase subunit alpha | - |
| LDO07_RS11155 (TthAK1_21970) | 86388..86630 | + | 243 | WP_008633599.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| LDO07_RS11160 (TthAK1_21980) | 86611..87066 | + | 456 | WP_008633600.1 | PIN domain-containing protein | - |
| LDO07_RS11165 (TthAK1_21990) | 87111..87557 | + | 447 | Protein_103 | ParA family protein | - |
| LDO07_RS11170 (TthAK1_22000) | 87554..87901 | + | 348 | WP_267461259.1 | ATPase | - |
| LDO07_RS11175 (TthAK1_22010) | 87949..88884 | - | 936 | WP_223966846.1 | IS91 family transposase ISAzo26 | Transposase |
| LDO07_RS11180 (TthAK1_22020) | 88881..89363 | - | 483 | WP_223966848.1 | type II toxin-antitoxin system VapC family toxin | - |
| LDO07_RS11185 (TthAK1_22030) | 89335..89511 | - | 177 | WP_223966850.1 | hypothetical protein | - |
| LDO07_RS11190 (TthAK1_22040) | 89609..89770 | - | 162 | WP_223966852.1 | hypothetical protein | - |
| LDO07_RS11195 (TthAK1_22050) | 89903..91003 | + | 1101 | WP_143584933.1 | IS701 family transposase ISAcma37 | Transposase |
| LDO07_RS11200 (TthAK1_22060) | 91000..91185 | + | 186 | Protein_110 | IS256 family transposase ISTth4 | Transposase |
| LDO07_RS11205 (TthAK1_22070) | 91207..92526 | + | 1320 | WP_223966854.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| LDO07_RS11210 (TthAK1_22080) | 92533..93021 | + | 489 | WP_143587041.1 | aromatic-ring-hydroxylating dioxygenase subunit beta | - |
| LDO07_RS11215 (TthAK1_22090) | 93089..94366 | - | 1278 | WP_223965630.1 | IS256 family transposase ISCsa2 | Transposase |
| LDO07_RS11220 (TthAK1_22100) | 94435..95232 | + | 798 | WP_223966993.1 | Dihydroanticapsin 7-dehydrogenase | VF |
| LDO07_RS11225 (TthAK1_22110) | 95415..95816 | - | 402 | WP_143587037.1 | type II toxin-antitoxin system VapC family toxin | - |
| LDO07_RS11230 (TthAK1_22120) | 95813..96085 | - | 273 | WP_143587035.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| LDO07_RS11235 (TthAK1_22150) | 96613..96774 | - | 162 | WP_223966857.1 | hypothetical protein | - |
| LDO07_RS11240 (TthAK1_22160) | 96817..97200 | - | 384 | WP_143587033.1 | hypothetical protein | - |
| LDO07_RS11245 (TthAK1_22170) | 97381..98556 | + | 1176 | WP_143587031.1 | IS200-IS605 family transposase ISSoc8 | Transposase |
| LDO07_RS11250 (TthAK1_22180) | 98891..99673 | + | 783 | WP_223966859.1 | hypothetical protein | - |
| LDO07_RS11255 (TthAK1_22190) | 99695..100891 | - | 1197 | WP_223966861.1 | hypothetical protein | - |
| LDO07_RS11260 (TthAK1_22200) | 101242..102087 | + | 846 | WP_223965641.1 | transposase | - |
| LDO07_RS11265 (TthAK1_22210) | 102271..102909 | - | 639 | Protein_123 | CRISPR-associated endonuclease Cas1 | - |
| LDO07_RS11270 (TthAK1_22220) | 103166..104209 | + | 1044 | WP_223966863.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| LDO07_RS11275 (TthAK1_22230) | 104328..105122 | + | 795 | WP_143587023.1 | carbohydrate deacetylase | - |
| LDO07_RS11280 (TthAK1_22240) | 105136..106389 | + | 1254 | WP_143587021.1 | MFS transporter | - |
| LDO07_RS12055 (TthAK1_22250) | 106392..108116 | + | 1725 | WP_143587019.1 | glycoside hydrolase family 2 TIM barrel-domain containing protein | - |
| LDO07_RS11295 (TthAK1_22260) | 108128..110509 | + | 2382 | WP_172619235.1 | glycoside hydrolase family 31 protein | - |
| LDO07_RS11300 (TthAK1_22270) | 110506..112554 | + | 2049 | WP_223966865.1 | glycoside hydrolase family 2 TIM barrel-domain containing protein | - |
| LDO07_RS11305 (TthAK1_22280) | 112551..113816 | + | 1266 | WP_143587017.1 | MFS transporter | - |
| LDO07_RS11310 (TthAK1_22300) | 114309..115640 | - | 1332 | WP_223966867.1 | cobyrinate a,c-diamide synthase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|