MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 85780 bp
Accession: NZ_AP024863 Location: 1..85780 Organism: Vibrio aerogenes strain LMG 19650 Replicon: plasmid pLMG19650
Accession: NZ_AP024863 Location: 1..85780 Organism: Vibrio aerogenes strain LMG 19650 Replicon: plasmid pLMG19650
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OCV29_RS23175 | 1..780 | + | 780 | WP_261887477.1 | ParA family protein | - |
| OCV29_RS23180 | 777..1949 | + | 1173 | WP_261887478.1 | ParB/RepB/Spo0J family partition protein | - |
| OCV29_RS23185 | 2647..2994 | + | 348 | WP_261887479.1 | hypothetical protein | - |
| OCV29_RS23190 | 3509..3778 | + | 270 | WP_261887480.1 | hypothetical protein | - |
| OCV29_RS23195 | 4533..5090 | - | 558 | WP_261887481.1 | hypothetical protein | - |
| OCV29_RS23200 | 5395..5538 | - | 144 | WP_261887482.1 | hypothetical protein | - |
| OCV29_RS23205 | 5618..5974 | - | 357 | WP_261887483.1 | hypothetical protein | - |
| OCV29_RS23210 | 5973..6209 | + | 237 | WP_261887484.1 | hypothetical protein | - |
| OCV29_RS23215 | 6324..7994 | + | 1671 | WP_261887485.1 | DUF4942 domain-containing protein | - |
| OCV29_RS23220 | 8472..9266 | - | 795 | WP_261887486.1 | hypothetical protein | - |
| OCV29_RS23225 | 9272..9748 | - | 477 | WP_261887487.1 | type VI secretion system PAAR protein | - |
| OCV29_RS23230 | 10035..10637 | + | 603 | WP_261887488.1 | hypothetical protein | - |
| OCV29_RS23235 | 10729..11340 | - | 612 | WP_261887489.1 | hypothetical protein | - |
| OCV29_RS23240 | 11545..11943 | - | 399 | WP_261887490.1 | DNA-binding protein | - |
| OCV29_RS23245 | 11988..12392 | - | 405 | WP_261887491.1 | hypothetical protein | - |
| OCV29_RS23250 | 12385..13119 | - | 735 | WP_261887492.1 | StbB family protein | - |
| OCV29_RS23255 | 13127..13606 | - | 480 | WP_261887493.1 | hypothetical protein | - |
| OCV29_RS23260 | 13863..14237 | + | 375 | WP_261887494.1 | hypothetical protein | - |
| OCV29_RS23265 | 14231..17059 | + | 2829 | WP_261887495.1 | hypothetical protein | - |
| OCV29_RS23270 | 17341..17643 | + | 303 | WP_261887496.1 | hypothetical protein | - |
| OCV29_RS23275 | 17721..17864 | + | 144 | WP_261887521.1 | hypothetical protein | - |
| OCV29_RS23280 | 17961..19289 | - | 1329 | WP_261887497.1 | hypothetical protein | - |
| OCV29_RS23285 | 19309..21186 | - | 1878 | WP_261887498.1 | DUF262 domain-containing HNH endonuclease family protein | - |
| OCV29_RS23290 | 21176..22516 | - | 1341 | WP_261887499.1 | DUF262 domain-containing protein | - |
| OCV29_RS23295 | 22519..24297 | - | 1779 | WP_261887500.1 | restriction endonuclease subunit S | - |
| OCV29_RS23300 | 24300..25793 | - | 1494 | WP_261887501.1 | type I restriction-modification system subunit M | - |
| OCV29_RS23305 | 25866..28325 | - | 2460 | WP_261887502.1 | DEAD/DEAH box helicase family protein | - |
| OCV29_RS23310 | 29037..29912 | + | 876 | WP_261887503.1 | hypothetical protein | - |
| OCV29_RS23315 | 29994..30833 | - | 840 | WP_261887504.1 | alpha/beta hydrolase | - |
| OCV29_RS23320 | 31478..31666 | + | 189 | WP_261887505.1 | TraY domain-containing protein | - |
| OCV29_RS23325 | 31965..32357 | + | 393 | WP_261887506.1 | TraY domain-containing protein | - |
| OCV29_RS23330 | 32413..32727 | + | 315 | WP_261887507.1 | conjugal transfer protein | - |
| OCV29_RS23335 | 32730..33101 | + | 372 | WP_261887508.1 | conjugal transfer protein TraD | - |
| OCV29_RS23340 | 33061..35385 | + | 2325 | WP_261887509.1 | conjugal transfer protein TraE | - |
| OCV29_RS23345 | 35382..36053 | + | 672 | WP_261887510.1 | type IV secretion system protein | - |
| OCV29_RS23350 | 36071..36322 | + | 252 | WP_261887511.1 | EexN family lipoprotein | - |
| OCV29_RS23355 | 36454..37287 | + | 834 | WP_261887512.1 | type IV secretion system protein | - |
| OCV29_RS23360 | 37338..38087 | - | 750 | WP_261887513.1 | glycoside hydrolase family 75 protein | - |
| OCV29_RS23365 | 38243..38398 | + | 156 | WP_261887514.1 | hypothetical protein | - |
| OCV29_RS23370 | 38395..39156 | + | 762 | WP_261887515.1 | Type IV secretion system protein PtlE | VF |
| OCV29_RS23375 | 39153..39941 | + | 789 | WP_261887516.1 | Type IV secretion system protein virB9 | VF |
| OCV29_RS23380 | 39934..41160 | + | 1227 | WP_261887517.1 | Type IV secretion system protein virB10 | VF |
| OCV29_RS23385 | 41334..42374 | + | 1041 | WP_261887518.1 | Type IV secretion system protein VirB11 | VF |
| OCV29_RS23390 | 42371..44155 | + | 1785 | WP_261887519.1 | type IV secretory system conjugative DNA transfer family protein | - |
| OCV29_RS23395 | 44179..44730 | + | 552 | WP_261887441.1 | conjugal transfer protein TraL | - |
| OCV29_RS23400 | 44879..45232 | + | 354 | WP_261887442.1 | hypothetical protein | - |
| OCV29_RS23405 | 45235..45885 | - | 651 | WP_261887443.1 | hypothetical protein | - |
| OCV29_RS23410 | 46122..46604 | + | 483 | WP_261887444.1 | DNA repair protein RadC | - |
| OCV29_RS23415 | 46664..47014 | + | 351 | WP_261887445.1 | hypothetical protein | - |
| OCV29_RS23420 | 47108..47347 | + | 240 | WP_261887446.1 | hypothetical protein | - |
| OCV29_RS23425 | 47756..48355 | - | 600 | WP_261887447.1 | class I SAM-dependent methyltransferase | - |
| OCV29_RS23430 | 48399..48770 | - | 372 | WP_261887448.1 | hypothetical protein | - |
| OCV29_RS23435 | 48807..49295 | - | 489 | WP_261887449.1 | hypothetical protein | - |
| OCV29_RS23440 | 49601..50206 | - | 606 | WP_261887450.1 | hypothetical protein | - |
| OCV29_RS23445 | 50252..50995 | - | 744 | WP_261887451.1 | hypothetical protein | - |
| OCV29_RS23450 | 51013..54294 | - | 3282 | WP_261887452.1 | T6SS effector BTH_I2691 family protein | - |
| OCV29_RS23455 | 54291..55157 | - | 867 | WP_261887453.1 | DUF4123 domain-containing protein | - |
| OCV29_RS23460 | 55157..57316 | - | 2160 | WP_261887454.1 | Actin cross-linking toxin VgrG1 | VF |
| OCV29_RS23465 | 58413..59675 | + | 1263 | WP_261887455.1 | replication initiation protein | - |
| OCV29_RS23470 | 59795..60052 | + | 258 | WP_261887456.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| OCV29_RS23475 | 60055..60330 | + | 276 | WP_261887520.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OCV29_RS23480 | 60443..60646 | - | 204 | WP_261887457.1 | hypothetical protein | - |
| OCV29_RS23485 | 60984..61817 | - | 834 | WP_261887458.1 | hypothetical protein | - |
| OCV29_RS23490 | 62285..62935 | + | 651 | WP_261887459.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| OCV29_RS23495 | 63409..64371 | - | 963 | WP_261887460.1 | type III-B CRISPR module RAMP protein Cmr6 | - |
| OCV29_RS23500 | 64364..64843 | - | 480 | WP_261887461.1 | type III-B CRISPR module-associated protein Cmr5 | - |
| OCV29_RS23505 | 64840..65715 | - | 876 | WP_261887462.1 | type III-B CRISPR module RAMP protein Cmr4 | - |
| OCV29_RS23510 | 65732..67006 | - | 1275 | WP_261887463.1 | type III-B CRISPR module-associated Cmr3 family protein | - |
| OCV29_RS23515 | 67003..69318 | - | 2316 | WP_261887464.1 | type III-B CRISPR-associated protein Cas10/Cmr2 | - |
| OCV29_RS23520 | 69305..70840 | - | 1536 | WP_261887465.1 | hypothetical protein | - |
| OCV29_RS23525 | 70842..72656 | - | 1815 | WP_261887466.1 | hypothetical protein | - |
| OCV29_RS23530 | 72658..72975 | - | 318 | WP_261887467.1 | YddF family protein | - |
| OCV29_RS23535 | 73074..76085 | + | 3012 | WP_261887468.1 | CRISPR-associated endonuclease Cas1 | - |
| OCV29_RS23540 | 76070..76363 | + | 294 | WP_261887469.1 | CRISPR-associated endonuclease Cas2 | - |
| OCV29_RS23545 | 77021..77335 | - | 315 | WP_261887470.1 | hypothetical protein | - |
| OCV29_RS23550 | 77420..77632 | - | 213 | WP_261887471.1 | hypothetical protein | - |
| OCV29_RS23555 | 77870..78139 | - | 270 | WP_261887472.1 | hypothetical protein | - |
| OCV29_RS23560 | 78410..79855 | - | 1446 | WP_261887473.1 | Regulatory protein LuxO | VF |
| OCV29_RS23565 | 79858..81390 | - | 1533 | WP_261887474.1 | phospholipase D-like domain-containing protein | - |
| OCV29_RS23570 | 81403..82512 | - | 1110 | WP_261887475.1 | hypothetical protein | - |
| OCV29_RS23575 | 82509..85235 | - | 2727 | WP_261887476.1 | DEAD/DEAH box helicase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|