MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 66039 bp
Accession: NZ_AP024847 Location: 4438934..4504972 Organism: Serratia marcescens strain 2020-O-9 Replicon: chromosome
Accession: NZ_AP024847 Location: 4438934..4504972 Organism: Serratia marcescens strain 2020-O-9 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LDN81_RS21425 (SMGES_42470) | 4434598..4436115 | - | 1518 | WP_033649459.1 | lysine--tRNA ligase | - |
| LDN81_RS21435 (SMGES_42500) | 4437390..4439123 | - | 1734 | WP_033635823.1 | single-stranded-DNA-specific exonuclease RecJ | - |
| LDN81_RS21440 (SMGES_42510) | 4439130..4439846 | - | 717 | WP_041036552.1 | bifunctional protein-disulfide isomerase/oxidoreductase DsbC | - |
| LDN81_RS21445 (SMGES_42520) | 4439873..4440772 | - | 900 | WP_033638574.1 | IS91 family transposase ISAzo26 | Transposase |
| LDN81_RS21450 (SMGES_42530) | 4440879..4441397 | + | 519 | WP_033635825.1 | flavodoxin FldB | - |
| LDN81_RS21455 (SMGES_42540) | 4441435..4442799 | - | 1365 | WP_041036554.1 | cell envelope integrity protein CreD | - |
| LDN81_RS21460 (SMGES_42550) | 4442880..4444298 | - | 1419 | WP_033654070.1 | Adaptive-response sensory-kinase SasA | VF |
| LDN81_RS21465 (SMGES_42560) | 4444295..4444990 | - | 696 | WP_041036556.1 | Regulator of RpoS | VF |
| LDN81_RS21470 (SMGES_42570) | 4444990..4445412 | - | 423 | WP_041036558.1 | protein YgfX | Toxin Detail |
| LDN81_RS21475 (SMGES_42580) | 4445393..4445659 | - | 267 | WP_004931679.1 | FAD assembly factor SdhE | Antitoxin Detail |
| LDN81_RS21480 (SMGES_42600) | 4445980..4446972 | + | 993 | WP_041036561.1 | tRNA-modifying protein YgfZ | - |
| LDN81_RS21485 (SMGES_42610) | 4447011..4447508 | - | 498 | WP_033649451.1 | DUF2165 domain-containing protein | - |
| LDN81_RS21490 (SMGES_42620) | 4447659..4448333 | - | 675 | WP_038871224.1 | hypothetical protein | VF |
| LDN81_RS21495 (SMGES_42630) | 4448517..4449125 | + | 609 | WP_025304127.1 | HD domain-containing protein | - |
| LDN81_RS21500 (SMGES_42640) | 4449158..4450084 | - | 927 | WP_033635835.1 | ribokinase | - |
| LDN81_RS21505 (SMGES_42650) | 4450081..4450989 | - | 909 | WP_041036566.1 | allose kinase | - |
| LDN81_RS21510 (SMGES_42660) | 4451000..4451671 | - | 672 | WP_033654065.1 | hypothetical protein | VF |
| LDN81_RS21515 (SMGES_42670) | 4451703..4452737 | - | 1035 | WP_033654064.1 | ABC transporter permease | - |
| LDN81_RS21520 (SMGES_42680) | 4452748..4453734 | - | 987 | WP_033635839.1 | ABC transporter permease | - |
| LDN81_RS21525 (SMGES_42690) | 4453727..4455244 | - | 1518 | WP_041036568.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| LDN81_RS21530 (SMGES_42700) | 4455247..4456230 | - | 984 | WP_033635841.1 | substrate-binding domain-containing protein | - |
| LDN81_RS21535 (SMGES_42710) | 4456280..4457098 | - | 819 | WP_004931653.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| LDN81_RS21540 (SMGES_42720) | 4457410..4458735 | - | 1326 | WP_033654062.1 | MFS transporter | - |
| LDN81_RS21545 (SMGES_42730) | 4458732..4459385 | - | 654 | WP_041036570.1 | hypothetical protein | - |
| LDN81_RS21550 (SMGES_42740) | 4459435..4460781 | - | 1347 | WP_041036572.1 | amidase | - |
| LDN81_RS21555 (SMGES_42750) | 4460781..4461494 | - | 714 | WP_033635845.1 | DUF2848 domain-containing protein | - |
| LDN81_RS21560 (SMGES_42760) | 4461657..4462301 | + | 645 | WP_170929847.1 | GntR family transcriptional regulator | - |
| LDN81_RS21565 (SMGES_42770) | 4462529..4462846 | - | 318 | WP_033635847.1 | BrnA antitoxin family protein | - |
| LDN81_RS21570 (SMGES_42780) | 4462809..4463132 | - | 324 | WP_080335448.1 | BrnT family toxin | - |
| LDN81_RS21575 (SMGES_42790) | 4463208..4463954 | - | 747 | WP_041036574.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| LDN81_RS21580 (SMGES_42800) | 4464051..4464284 | - | 234 | WP_033635850.1 | hypothetical protein | - |
| LDN81_RS21585 (SMGES_42810) | 4464474..4465133 | + | 660 | WP_033654056.1 | Regulator of RpoS | VF |
| LDN81_RS21590 (SMGES_42820) | 4465138..4466556 | + | 1419 | WP_039567272.1 | ATP-binding protein | - |
| LDN81_RS21595 (SMGES_42830) | 4466553..4467083 | + | 531 | WP_039567270.1 | GNAT family N-acetyltransferase | - |
| LDN81_RS21600 (SMGES_42840) | 4467094..4468059 | - | 966 | WP_033649435.1 | hypothetical protein | VF |
| LDN81_RS21605 (SMGES_42850) | 4468168..4471047 | - | 2880 | WP_041036576.1 | aminomethyl-transferring glycine dehydrogenase | - |
| LDN81_RS21610 (SMGES_42860) | 4471140..4471526 | - | 387 | WP_033649434.1 | glycine cleavage system protein GcvH | - |
| LDN81_RS21615 (SMGES_42870) | 4471573..4472670 | - | 1098 | WP_033649433.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| LDN81_RS21620 (SMGES_42880) | 4473178..4474380 | - | 1203 | WP_033649432.1 | FAD-dependent 2-octaprenylphenol hydroxylase | - |
| LDN81_RS21625 (SMGES_42890) | 4474461..4475639 | - | 1179 | WP_041036578.1 | 2-octaprenyl-6-methoxyphenyl hydroxylase | - |
| LDN81_RS21630 (SMGES_42900) | 4475641..4476957 | - | 1317 | WP_223915453.1 | Xaa-Pro aminopeptidase | - |
| LDN81_RS21635 (SMGES_42910) | 4477013..4477591 | - | 579 | WP_033635861.1 | YecA family protein | - |
| LDN81_RS21640 (SMGES_42920) | 4477911..4478240 | + | 330 | WP_004931621.1 | cell division protein ZapA | - |
| LDN81_RS21650 (SMGES_42930) | 4478516..4479124 | + | 609 | WP_041036584.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| LDN81_RS21655 (SMGES_42940) | 4479173..4480411 | - | 1239 | WP_025304156.1 | phosphoglycerate dehydrogenase | - |
| LDN81_RS21660 (SMGES_42950) | 4480704..4481360 | - | 657 | WP_041036586.1 | ribose-5-phosphate isomerase RpiA | - |
| LDN81_RS21665 (SMGES_42960) | 4481565..4482458 | + | 894 | WP_033635863.1 | LysR family transcriptional regulator ArgP | - |
| LDN81_RS21670 (SMGES_42970) | 4482507..4483238 | - | 732 | WP_025160209.1 | oxidative stress defense protein | - |
| LDN81_RS21675 (SMGES_42980) | 4483360..4483977 | - | 618 | WP_025304159.1 | arginine exporter ArgO | - |
| LDN81_RS21680 (SMGES_42990) | 4484182..4484880 | + | 699 | WP_041038103.1 | RluA family pseudouridine synthase | - |
| LDN81_RS21685 (SMGES_43000) | 4484888..4485427 | - | 540 | WP_033635867.1 | DUF2058 domain-containing protein | - |
| LDN81_RS21690 (SMGES_43010) | 4485744..4486721 | + | 978 | WP_041036588.1 | DUF1852 domain-containing protein | - |
| LDN81_RS21695 (SMGES_43020) | 4486747..4487778 | + | 1032 | WP_033649411.1 | methionine synthase | - |
| LDN81_RS21700 (SMGES_43030) | 4487950..4489299 | + | 1350 | WP_041036590.1 | aromatic acid/H+ symport family MFS transporter | - |
| LDN81_RS21705 (SMGES_43040) | 4489382..4490248 | - | 867 | WP_033635871.1 | small-conductance mechanosensitive channel MscS | - |
| LDN81_RS21710 (SMGES_43050) | 4490454..4491122 | + | 669 | WP_033635872.1 | DUF1345 domain-containing protein | - |
| LDN81_RS21715 (SMGES_43060) | 4491179..4492258 | - | 1080 | WP_025304179.1 | class II fructose-bisphosphate aldolase | - |
| LDN81_RS21720 (SMGES_43070) | 4492375..4493538 | - | 1164 | WP_028127700.1 | phosphoglycerate kinase | - |
| LDN81_RS21725 (SMGES_43080) | 4493609..4494625 | - | 1017 | WP_004931582.1 | erythrose-4-phosphate dehydrogenase | - |
| LDN81_RS21730 (SMGES_43090) | 4494938..4495897 | - | 960 | WP_269454184.1 | HTH-type transcriptional regulator ArgP | VF |
| LDN81_RS21735 (SMGES_43100) | 4495980..4497065 | + | 1086 | WP_041036593.1 | tartrate dehydrogenase | - |
| LDN81_RS21740 (SMGES_43110) | 4497430..4499040 | + | 1611 | WP_041036595.1 | BCCT family transporter | - |
| LDN81_RS21745 (SMGES_43120) | 4499067..4500191 | + | 1125 | WP_033635879.1 | ring-hydroxylating oxygenase subunit alpha | - |
| LDN81_RS21750 (SMGES_43130) | 4500237..4501685 | + | 1449 | WP_041036597.1 | NAD-dependent succinate-semialdehyde dehydrogenase | - |
| LDN81_RS21755 (SMGES_43140) | 4501727..4502692 | + | 966 | WP_041036599.1 | PDR/VanB family oxidoreductase | - |
| LDN81_RS21760 (SMGES_43150) | 4502723..4503793 | - | 1071 | WP_041036601.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| LDN81_RS21765 (SMGES_43160) | 4503786..4505555 | - | 1770 | WP_033635883.1 | iron ABC transporter permease | - |
| LDN81_RS21770 (SMGES_43170) | 4505634..4506722 | - | 1089 | WP_041038105.1 | ABC transporter substrate-binding protein | - |
| LDN81_RS21775 (SMGES_43190) | 4507317..4508639 | + | 1323 | WP_039567241.1 | branched-chain amino acid transport system II carrier protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|