MGE detailed information
MGE type: Genomic_island MGE length: 17580 bp
Accession: NZ_AP024503 Location: 2878952..2896531 Organism: Pseudomonas protegens strain Go58 Replicon: chromosome
Accession: NZ_AP024503 Location: 2878952..2896531 Organism: Pseudomonas protegens strain Go58 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PproGo58_RS13080 () | 2874077..2874502 | - | 426 | WP_207168041.1 | N-acetyltransferase | - |
| PproGo58_RS13085 () | 2874595..2874888 | + | 294 | WP_207167695.1 | hypothetical protein | - |
| PproGo58_RS13090 () | 2874928..2875278 | + | 351 | WP_115582302.1 | hypothetical protein | - |
| PproGo58_RS13095 () | 2875386..2875997 | + | 612 | WP_102864505.1 | hypothetical protein | - |
| PproGo58_RS13100 () | 2876014..2876601 | + | 588 | WP_207167696.1 | hypothetical protein | - |
| PproGo58_RS13105 () | 2876687..2877241 | - | 555 | WP_207167698.1 | UPF0149 family protein | - |
| PproGo58_RS13110 () | 2877328..2877729 | - | 402 | WP_102864510.1 | hypothetical protein | - |
| PproGo58_RS13115 () | 2877867..2878559 | + | 693 | WP_207168043.1 | sigma-70 family RNA polymerase sigma factor | - |
| PproGo58_RS13120 () | 2878641..2878955 | - | 315 | WP_102864511.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PproGo58_RS13125 () | 2878952..2879233 | - | 282 | WP_207167700.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| PproGo58_RS13130 () | 2879342..2879962 | - | 621 | WP_207167702.1 | LysE family transporter | - |
| PproGo58_RS13135 () | 2880203..2880790 | - | 588 | WP_207167704.1 | inclusion body family protein | - |
| PproGo58_RS13140 () | 2881150..2882346 | + | 1197 | WP_207167706.1 | PrpF protein | - |
| PproGo58_RS13145 () | 2883329..2883670 | - | 342 | WP_102864516.1 | low molecular weight protein tyrosine phosphatase family protein | - |
| PproGo58_RS13150 () | 2883860..2884417 | + | 558 | WP_060843387.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| PproGo58_RS13155 () | 2884543..2885115 | + | 573 | WP_207167709.1 | HD domain-containing protein | Toxin Detail |
| PproGo58_RS13160 () | 2885373..2887553 | + | 2181 | WP_207167711.1 | hypothetical protein | VF |
| PproGo58_RS13165 () | 2887762..2888220 | + | 459 | WP_207167713.1 | hypothetical protein | - |
| PproGo58_RS13170 () | 2888412..2888840 | - | 429 | WP_125063949.1 | hypothetical protein | - |
| PproGo58_RS13175 () | 2889063..2889326 | + | 264 | WP_102864520.1 | hypothetical protein | - |
| PproGo58_RS13180 () | 2889323..2889517 | + | 195 | WP_207167715.1 | hypothetical protein | - |
| PproGo58_RS13185 () | 2889564..2890232 | - | 669 | WP_207167717.1 | phytanoyl-CoA dioxygenase family protein | - |
| PproGo58_RS13190 () | 2890523..2890816 | + | 294 | WP_207167719.1 | DUF3077 domain-containing protein | - |
| PproGo58_RS13195 () | 2892141..2893193 | + | 1053 | WP_207167721.1 | hypothetical protein | - |
| PproGo58_RS13200 () | 2893335..2895026 | - | 1692 | WP_207167722.1 | chemotaxis protein | - |
| PproGo58_RS13205 () | 2895023..2896744 | - | 1722 | WP_207167724.1 | hypothetical protein | - |
| PproGo58_RS13210 () | 2896920..2897531 | - | 612 | WP_207167726.1 | cupin domain-containing protein | - |
| PproGo58_RS13215 () | 2897605..2899557 | - | 1953 | WP_207167728.1 | FAD-dependent oxidoreductase | - |
| PproGo58_RS13220 () | 2899773..2900834 | + | 1062 | WP_129406772.1 | ABC transporter substrate-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|