MGE detailed information
MGE type: Prophage MGE length: 6437 bp
Accession: NZ_AP024480 Location: 643242..649678 Organism: Caldicellulosiruptor sp. YA01 Replicon: chromosome
Accession: NZ_AP024480 Location: 643242..649678 Organism: Caldicellulosiruptor sp. YA01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CaldiYA01_RS02790 () | 638667..640247 | + | 1581 | WP_207181132.1 | extracellular solute-binding protein | - |
| CaldiYA01_RS02800 () | 640587..641981 | + | 1395 | WP_207181134.1 | alpha-glucosidase/alpha-galactosidase | - |
| CaldiYA01_RS02805 () | 642436..643017 | + | 582 | WP_207181135.1 | Uma2 family endonuclease | - |
| CaldiYA01_RS02810 () | 643242..643659 | - | 418 | Protein_545 | type II toxin-antitoxin system HicB family antitoxin | - |
| CaldiYA01_RS02815 () | 643667..643876 | - | 210 | WP_207181137.1 | type II toxin-antitoxin system HicA family toxin | - |
| CaldiYA01_RS02820 () | 645268..645450 | + | 183 | WP_207181139.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| CaldiYA01_RS02825 () | 645473..645889 | + | 417 | WP_207181141.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| CaldiYA01_RS02830 () | 645904..646836 | - | 933 | WP_207181142.1 | RNA polymerase sigma factor RpoS | VF |
| CaldiYA01_RS02835 () | 647209..648310 | + | 1102 | Protein_550 | IS481 family transposase ISCbe2 | Transposase |
| CaldiYA01_RS02840 () | 648491..648709 | - | 219 | WP_207181144.1 | helix-turn-helix domain-containing protein | - |
| CaldiYA01_RS02845 () | 648875..649678 | + | 804 | WP_207181146.1 | ISNCY family transposase ISH7A | Transposase |
| CaldiYA01_RS02850 () | 649659..650240 | + | 582 | WP_207181148.1 | Uma2 family endonuclease | - |
| CaldiYA01_RS02865 () | 650778..651674 | + | 897 | WP_207181150.1 | hypothetical protein | - |
| CaldiYA01_RS02870 () | 651718..651939 | - | 222 | WP_207181152.1 | zinc ribbon domain-containing protein | - |
| CaldiYA01_RS02875 () | 652033..652551 | - | 519 | WP_207181153.1 | ferritin | - |
| CaldiYA01_RS02880 () | 652864..653703 | + | 840 | WP_207181156.1 | Rossmann-like and DUF2520 domain-containing protein | - |
| CaldiYA01_RS02885 () | 653708..654502 | + | 795 | WP_207181158.1 | 3-methyl-2-oxobutanoate hydroxymethyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|