MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 109754 bp
Accession: NZ_AP024273 Location: 1..109754 Organism: Thermus thermophilus strain HB5018 Replicon: plasmid pHB5018d
Accession: NZ_AP024273 Location: 1..109754 Organism: Thermus thermophilus strain HB5018 Replicon: plasmid pHB5018d
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMH49_RS12675 () | 393..857 | - | 465 | WP_014630519.1 | YbjN domain-containing protein | - |
| JMH49_RS12680 () | 857..2131 | - | 1275 | WP_201351651.1 | hypothetical protein | VF |
| JMH49_RS12685 () | 2425..2643 | - | 219 | WP_011174343.1 | hypothetical protein | - |
| JMH49_RS12690 () | 2790..5405 | + | 2616 | WP_201351652.1 | transcriptional regulator | - |
| JMH49_RS12695 () | 5752..7014 | - | 1263 | WP_201351653.1 | MFS transporter | - |
| JMH49_RS12700 () | 7014..7223 | - | 210 | WP_143591994.1 | hypothetical protein | - |
| JMH49_RS12705 () | 7424..8547 | + | 1124 | WP_201350746.1 | IS3 family transposase ISTth1 | Transposase |
| JMH49_RS12710 () | 8625..8870 | + | 246 | WP_201351505.1 | CopG family transcriptional regulator | - |
| JMH49_RS12715 () | 8867..9151 | + | 285 | Protein_9 | type II toxin-antitoxin system VapC family toxin | - |
| JMH49_RS12720 () | 9150..9680 | - | 531 | Protein_10 | IS607 family transposase ISCbe1 | Transposase |
| JMH49_RS12730 () | 10918..11973 | - | 1056 | Protein_12 | IS607 family transposase ISCbe1 | Transposase |
| JMH49_RS12735 () | 12112..12279 | + | 168 | Protein_13 | VapC toxin family PIN domain ribonuclease | - |
| JMH49_RS12740 () | 12396..12791 | + | 396 | WP_024119881.1 | hypothetical protein | - |
| JMH49_RS12745 () | 12802..13170 | + | 369 | WP_201351420.1 | DUF488 family protein | - |
| JMH49_RS12750 () | 13148..13678 | - | 531 | WP_201351654.1 | Peptide methionine sulfoxide reductase MsrA 2 | VF |
| JMH49_RS12755 () | 13772..14092 | + | 321 | WP_201351421.1 | hypothetical protein | - |
| JMH49_RS12760 () | 14136..14540 | + | 405 | WP_201351655.1 | MarR family transcriptional regulator | - |
| JMH49_RS12765 () | 14537..14971 | - | 435 | WP_201351422.1 | cytochrome c | - |
| JMH49_RS12770 () | 14977..16104 | - | 1128 | WP_201351423.1 | TIGR04053 family radical SAM/SPASM domain-containing protein | - |
| JMH49_RS12775 () | 16202..17554 | - | 1353 | WP_201351669.1 | multicopper oxidase domain-containing protein | - |
| JMH49_RS12780 () | 17679..18155 | + | 477 | WP_201351424.1 | YbaN family protein | - |
| JMH49_RS12785 () | 18108..18551 | - | 444 | WP_126187421.1 | hypothetical protein | - |
| JMH49_RS12790 () | 18786..19316 | + | 531 | WP_201351425.1 | hypothetical protein | - |
| JMH49_RS12795 () | 19327..21009 | + | 1683 | WP_201351426.1 | cbb3-type cytochrome c oxidase subunit I | - |
| JMH49_RS12800 () | 21065..21490 | + | 426 | WP_201351427.1 | Rrf2 family transcriptional regulator | - |
| JMH49_RS12805 () | 21539..21736 | + | 198 | WP_126187418.1 | DUF542 domain-containing protein | - |
| JMH49_RS12810 () | 21733..22029 | + | 297 | WP_201351428.1 | AraC family ligand binding domain-containing protein | - |
| JMH49_RS12815 () | 22026..22403 | + | 378 | WP_201351429.1 | hypothetical protein | - |
| JMH49_RS12820 () | 22447..23544 | + | 1098 | WP_201351656.1 | YwiC-like family protein | - |
| JMH49_RS12825 () | 23718..24751 | + | 1034 | WP_164926047.1 | IS630 family transposase ISTth6 | Transposase |
| JMH49_RS12830 () | 24751..25086 | - | 336 | Protein_32 | hypothetical protein | - |
| JMH49_RS12835 () | 25281..25439 | - | 159 | WP_201351430.1 | hypothetical protein | - |
| JMH49_RS12840 () | 25460..25798 | - | 339 | WP_165740224.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| JMH49_RS12845 () | 25848..26944 | - | 1097 | Protein_35 | IS4 family transposase ISTth2 | Transposase |
| JMH49_RS12850 () | 27080..27562 | + | 483 | WP_024119878.1 | arsenate reductase (azurin) small subunit | - |
| JMH49_RS12855 () | 27574..30159 | + | 2586 | WP_201351657.1 | arsenate reductase (azurin) large subunit | - |
| JMH49_RS12860 () | 30229..31620 | + | 1392 | WP_011229172.1 | replication initiator protein A | - |
| JMH49_RS12865 () | 32131..33099 | + | 969 | WP_011229173.1 | Chromosome-partitioning ATPase Soj | VF |
| JMH49_RS12870 () | 33096..33983 | + | 888 | WP_201351658.1 | ParB/RepB/Spo0J family partition protein | - |
| JMH49_RS12875 () | 34439..36067 | + | 1629 | WP_201351659.1 | IS1634 family transposase ISTth3 | Transposase |
| JMH49_RS12880 () | 36373..36585 | + | 213 | WP_041445176.1 | hypothetical protein | - |
| JMH49_RS12885 () | 36862..38463 | + | 1602 | WP_201351660.1 | acyl-CoA dehydrogenase family protein | - |
| JMH49_RS12890 () | 38460..38603 | + | 144 | WP_011174487.1 | hypothetical protein | - |
| JMH49_RS12895 () | 38735..40165 | + | 1431 | WP_201351661.1 | alpha-galactosidase | - |
| JMH49_RS12900 () | 40149..41198 | + | 1050 | WP_201351662.1 | galactose-1-phosphate uridylyltransferase | - |
| JMH49_RS12905 () | 41278..42066 | + | 789 | WP_201351663.1 | tryptophan-rich sensory protein | - |
| JMH49_RS12910 () | 42063..43010 | + | 948 | WP_024119841.1 | DUF523 and DUF1722 domain-containing protein | - |
| JMH49_RS12915 () | 43041..43433 | - | 393 | WP_011174492.1 | nucleotidyltransferase domain-containing protein | - |
| JMH49_RS12920 () | 43443..44441 | - | 999 | WP_011229187.1 | type 2 isopentenyl-diphosphate Delta-isomerase | - |
| JMH49_RS12925 () | 44438..46006 | - | 1569 | WP_143591965.1 | phytoene desaturase | - |
| JMH49_RS12930 () | 46104..46520 | - | 417 | WP_162467455.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| JMH49_RS12935 () | 46517..46825 | - | 309 | WP_014630570.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| JMH49_RS12940 () | 46831..47859 | - | 1029 | WP_201351664.1 | glycosyltransferase | - |
| JMH49_RS12945 () | 47856..48533 | - | 678 | WP_143591964.1 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | - |
| JMH49_RS12950 () | 48538..49236 | - | 699 | WP_011174499.1 | lycopene cyclase domain-containing protein | - |
| JMH49_RS12955 () | 49233..50402 | - | 1170 | WP_201351665.1 | cytochrome P450 | - |
| JMH49_RS12960 () | 50588..51850 | - | 1263 | WP_201351666.1 | deoxyribodipyrimidine photo-lyase | - |
| JMH49_RS12965 () | 51850..52701 | - | 852 | WP_024119685.1 | phytoene/squalene synthase family protein | - |
| JMH49_RS12970 () | 52811..53668 | + | 858 | WP_201351667.1 | MerR family transcriptional regulator | - |
| JMH49_RS12975 () | 53665..54252 | + | 588 | WP_011174504.1 | transcriptional regulator LdrP | - |
| JMH49_RS12980 () | 54253..55116 | + | 864 | WP_201351668.1 | complex I NDUFA9 subunit family protein | - |
| JMH49_RS12985 () | 55290..55400 | + | 111 | Protein_63 | DUF4926 domain-containing protein | - |
| JMH49_RS12990 () | 55510..56025 | - | 516 | WP_201351631.1 | YceI family protein | - |
| JMH49_RS12995 () | 56022..56552 | - | 531 | WP_201351632.1 | flavin reductase | - |
| JMH49_RS13000 () | 56554..57177 | - | 624 | WP_024119681.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| JMH49_RS13005 () | 57239..58732 | - | 1494 | WP_201351633.1 | SDR family oxidoreductase | - |
| JMH49_RS13010 () | 58780..60183 | + | 1404 | WP_201351634.1 | FAD-dependent oxidoreductase | - |
| JMH49_RS13015 () | 60098..61369 | - | 1272 | WP_201351635.1 | alpha/beta fold hydrolase | - |
| JMH49_RS13020 () | 61375..62127 | - | 753 | WP_201351636.1 | methyltransferase domain-containing protein | - |
| JMH49_RS13025 () | 62114..62779 | - | 666 | WP_201351637.1 | DUF4397 domain-containing protein | - |
| JMH49_RS13030 () | 62944..63861 | + | 918 | WP_201351638.1 | MBL fold metallo-hydrolase | - |
| JMH49_RS13035 () | 63945..65255 | - | 1311 | WP_201351639.1 | beta-glucosidase | - |
| JMH49_RS13040 () | 65277..66134 | - | 858 | WP_201351434.1 | carbohydrate ABC transporter permease | - |
| JMH49_RS13045 () | 66138..67058 | - | 921 | WP_201351435.1 | sugar ABC transporter permease | - |
| JMH49_RS13050 () | 67097..68401 | - | 1305 | WP_201351436.1 | sugar ABC transporter substrate-binding protein | - |
| JMH49_RS13055 () | 68477..69469 | - | 993 | WP_201351640.1 | LacI family transcriptional regulator | - |
| JMH49_RS13060 () | 69688..70407 | - | 720 | WP_011174522.1 | 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase | VF |
| JMH49_RS13065 () | 70417..71346 | - | 930 | WP_011174523.1 | 2-dehydro-3-deoxygluconokinase | - |
| JMH49_RS13070 () | 71339..72373 | - | 1035 | WP_201351438.1 | putative oxidoreductase YjmC | VF |
| JMH49_RS13075 () | 72370..73074 | - | 705 | WP_014630550.1 | 2-keto-3-deoxy-L-fuconate dehydrogenase | VF |
| JMH49_RS13080 () | 73071..74354 | - | 1284 | WP_201351641.1 | TRAP transporter large permease | - |
| JMH49_RS13085 () | 74357..74818 | - | 462 | WP_011174527.1 | TRAP transporter small permease | - |
| JMH49_RS13090 () | 74860..75591 | - | 732 | Protein_84 | C4-dicarboxylate TRAP transporter substrate-binding protein | - |
| JMH49_RS13095 () | 75543..76070 | - | 528 | WP_024119668.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| JMH49_RS13100 () | 76358..77122 | + | 765 | WP_201351642.1 | sugar phosphate isomerase/epimerase | - |
| JMH49_RS13105 () | 77448..78356 | + | 909 | WP_201351643.1 | sugar ABC transporter permease | - |
| JMH49_RS13110 () | 78346..79158 | + | 813 | WP_014677608.1 | carbohydrate ABC transporter permease | - |
| JMH49_RS13115 () | 79170..80489 | + | 1320 | WP_014677609.1 | ABC transporter substrate-binding protein | - |
| JMH49_RS13120 () | 80564..81298 | + | 735 | WP_201351644.1 | 5'/3'-nucleotidase SurE | - |
| JMH49_RS13125 () | 81374..81775 | - | 402 | WP_008631445.1 | DsrE family protein | - |
| JMH49_RS13130 () | 81937..83037 | - | 1101 | WP_201351259.1 | IS701 family transposase ISAcma37 | Transposase |
| JMH49_RS13135 () | 83150..85207 | + | 2058 | WP_011229221.1 | argonaute PAZ domain-containing protein | - |
| JMH49_RS13140 () | 85382..86887 | + | 1506 | WP_201351645.1 | alkaline phosphatase | - |
| JMH49_RS13145 () | 86884..88902 | - | 2019 | WP_201351646.1 | cobyric acid synthase | - |
| JMH49_RS13150 () | 88987..89985 | - | 999 | WP_201351440.1 | histidinol-phosphate aminotransferase family protein | - |
| JMH49_RS13155 () | 90031..90360 | - | 330 | WP_014511282.1 | nucleotidyltransferase domain-containing protein | - |
| JMH49_RS13160 () | 90287..90718 | - | 432 | WP_011229225.1 | HEPN domain-containing protein | - |
| JMH49_RS13165 () | 90728..91576 | - | 849 | WP_011174539.1 | cobalamin biosynthesis protein CobD | - |
| JMH49_RS13170 () | 91573..92220 | - | 648 | WP_008631426.1 | 5,6-dimethylbenzimidazole synthase | - |
| JMH49_RS13175 () | 92186..92893 | - | 708 | WP_011174541.1 | uroporphyrinogen-III C-methyltransferase | - |
| JMH49_RS13180 () | 92890..93252 | - | 363 | WP_201351441.1 | DUF3209 family protein | - |
| JMH49_RS13185 () | 93253..94356 | - | 1104 | WP_201351647.1 | cobalamin biosynthesis protein CbiX | - |
| JMH49_RS13190 () | 94353..95432 | - | 1080 | WP_011229228.1 | cobalamin biosynthesis protein | - |
| JMH49_RS13195 () | 95425..96312 | - | 888 | WP_011229229.1 | precorrin-3B C(17)-methyltransferase | - |
| JMH49_RS13200 () | 96317..97060 | - | 744 | WP_008631410.1 | cobalt-precorrin-4/precorrin-4 C(11)-methyltransferase | - |
| JMH49_RS13205 () | 97057..97728 | - | 672 | WP_011174543.1 | precorrin-2 C(20)-methyltransferase | - |
| JMH49_RS13210 () | 97725..98936 | - | 1212 | WP_143591934.1 | precorrin-6y C5,15-methyltransferase (decarboxylating) subunit CbiE | - |
| JMH49_RS13215 () | 98937..99635 | - | 699 | WP_011174544.1 | precorrin-8X methylmutase | - |
| JMH49_RS13220 () | 99628..100728 | - | 1101 | WP_008631402.1 | cobalt-precorrin-5B (C(1))-methyltransferase | - |
| JMH49_RS13225 () | 100725..101387 | - | 663 | WP_024119298.1 | nickel permease | - |
| JMH49_RS13230 () | 101652..102185 | - | 534 | WP_011229232.1 | histidine phosphatase family protein | - |
| JMH49_RS13235 () | 102209..103219 | + | 1011 | WP_201351648.1 | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | - |
| JMH49_RS13240 () | 103242..105050 | + | 1809 | WP_201351649.1 | hypothetical protein | - |
| JMH49_RS13245 () | 105051..105773 | + | 723 | WP_008631386.1 | adenosylcobinamide-GDP ribazoletransferase | - |
| JMH49_RS13250 () | 105778..106611 | + | 834 | WP_201351443.1 | apolipoprotein A1/A4/E family protein | - |
| JMH49_RS13255 () | 106643..107206 | + | 564 | WP_165739807.1 | cob(I)yrinic acid a,c-diamide adenosyltransferase | - |
| JMH49_RS13260 () | 107206..108534 | + | 1329 | WP_201351650.1 | cobyrinate a,c-diamide synthase | - |
| JMH49_RS13265 () | 108559..109425 | - | 867 | WP_038039066.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|