MGE detailed information
MGE type: Prophage MGE length: 135356 bp
Accession: NZ_AP024233 Location: 1781020..1916375 Organism: Desulfolithobacter dissulfuricans strain GF1 Replicon: chromosome
Accession: NZ_AP024233 Location: 1781020..1916375 Organism: Desulfolithobacter dissulfuricans strain GF1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GF1_RS07830 (GF1_15860) | 1776089..1776628 | - | 540 | WP_267929071.1 | cob(I)yrinic acid a,c-diamide adenosyltransferase | - |
| GF1_RS07835 (GF1_15870) | 1776621..1777217 | - | 597 | WP_267929072.1 | TrmH family RNA methyltransferase | - |
| GF1_RS07840 (GF1_15880) | 1777313..1777879 | + | 567 | WP_267929073.1 | hypothetical protein | - |
| GF1_RS07845 (GF1_15890) | 1777885..1778358 | + | 474 | WP_267929074.1 | C-GCAxxG-C-C family protein | - |
| GF1_RS07850 (GF1_15900) | 1778378..1779388 | - | 1011 | WP_267929123.1 | peptide-methionine (S)-S-oxide reductase MsrA | - |
| GF1_RS07855 (GF1_15910) | 1779551..1780849 | - | 1299 | WP_267929075.1 | MFS transporter | - |
| GF1_RS07860 (GF1_15920) | 1781020..1782288 | - | 1269 | WP_267926063.1 | group II intron reverse transcriptase/maturase | - |
| GF1_RS07865 (GF1_15940) | 1784008..1784151 | - | 144 | WP_267927355.1 | hypothetical protein | - |
| GF1_RS07870 (GF1_15950) | 1784179..1785900 | + | 1722 | WP_267927356.1 | IS1634 family transposase | - |
| GF1_RS07875 (GF1_15960) | 1785966..1786301 | + | 336 | WP_267929076.1 | ISNCY family transposase ISAcif1 | Transposase |
| GF1_RS07880 (GF1_15970) | 1786487..1787731 | - | 1245 | WP_267926041.1 | ISL3 family transposase ISDvu5 | Transposase |
| GF1_RS07885 (GF1_15980) | 1787866..1790160 | - | 2295 | WP_267929077.1 | DNA sulfur modification protein DndB | - |
| GF1_RS07890 (GF1_15990) | 1790161..1790823 | - | 663 | WP_267929078.1 | hypothetical protein | - |
| GF1_RS07895 (GF1_16010) | 1791374..1791691 | + | 318 | WP_267929079.1 | hypothetical protein | - |
| GF1_RS07900 (GF1_16020) | 1791825..1792058 | + | 234 | WP_267929080.1 | hypothetical protein | - |
| GF1_RS07905 (GF1_16030) | 1792109..1792900 | - | 792 | WP_267929081.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| GF1_RS07910 (GF1_16040) | 1792893..1793171 | - | 279 | WP_267929083.1 | hypothetical protein | - |
| GF1_RS07915 (GF1_16050) | 1793231..1795009 | - | 1779 | WP_267929085.1 | hypothetical protein | - |
| GF1_RS07920 (GF1_16060) | 1794916..1796385 | - | 1470 | WP_267929086.1 | hypothetical protein | - |
| GF1_RS07925 (GF1_16070) | 1796382..1797308 | - | 927 | WP_267929087.1 | DUF4007 family protein | - |
| GF1_RS07930 (GF1_16080) | 1797764..1798186 | - | 423 | WP_267929124.1 | IS3 family transposase ISSsp2 | Transposase |
| GF1_RS07935 (GF1_16090) | 1798218..1798526 | - | 309 | WP_267925988.1 | hypothetical protein | - |
| GF1_RS07940 (GF1_16100) | 1798784..1798936 | - | 153 | WP_267925989.1 | IS3 family transposase ISTth1 | Transposase |
| GF1_RS07945 (GF1_16110) | 1798993..1799598 | - | 606 | WP_267925990.1 | hypothetical protein | - |
| GF1_RS07950 (GF1_16120) | 1799858..1800169 | - | 312 | WP_267925991.1 | nucleotidyltransferase family protein | - |
| GF1_RS07955 (GF1_16130) | 1800233..1800880 | - | 648 | WP_267925992.1 | LexA family transcriptional regulator | - |
| GF1_RS07960 (GF1_16140) | 1801054..1801539 | + | 486 | WP_267925993.1 | helix-turn-helix domain-containing protein | - |
| GF1_RS07965 (GF1_16150) | 1801716..1801952 | + | 237 | WP_267925994.1 | IS607 family transposase ISTko2 | Transposase |
| GF1_RS07970 (GF1_16160) | 1801964..1802329 | + | 366 | WP_267925995.1 | hypothetical protein | - |
| GF1_RS07975 | 1802352..1802552 | + | 201 | WP_267925996.1 | hypothetical protein | - |
| GF1_RS07980 (GF1_16170) | 1802549..1802788 | + | 240 | WP_267925997.1 | nicotinamide mononucleotide transporter | - |
| GF1_RS07985 | 1802785..1804113 | + | 1329 | WP_267925998.1 | plasmid replication initiator TrfA | - |
| GF1_RS07990 (GF1_16200) | 1804745..1805698 | + | 954 | WP_267925999.1 | phage antirepressor N-terminal domain-containing protein | - |
| GF1_RS07995 (GF1_16210) | 1805841..1806437 | + | 597 | WP_267926001.1 | sigma-70 family RNA polymerase sigma factor | - |
| GF1_RS08000 (GF1_16220) | 1806427..1806807 | + | 381 | WP_267926003.1 | hypothetical protein | - |
| GF1_RS08005 (GF1_16230) | 1807250..1807741 | + | 492 | WP_267926004.1 | hypothetical protein | VF |
| GF1_RS08010 (GF1_16240) | 1807741..1808466 | + | 726 | WP_267926005.1 | DsbC family protein | - |
| GF1_RS08015 (GF1_16250) | 1808548..1808853 | + | 306 | WP_267926006.1 | hypothetical protein | - |
| GF1_RS08020 (GF1_16260) | 1808863..1809141 | + | 279 | WP_267926007.1 | type IV conjugative transfer system protein TraL | - |
| GF1_RS08025 (GF1_16270) | 1809138..1809695 | + | 558 | WP_267926008.1 | TraE/TraK family type IV conjugative transfer system protein | - |
| GF1_RS08030 (GF1_16280) | 1809692..1810456 | + | 765 | WP_267926009.1 | type-F conjugative transfer system secretin TraK | - |
| GF1_RS08035 (GF1_16290) | 1810453..1811649 | + | 1197 | WP_267926010.1 | TrbI/VirB10 family protein | - |
| GF1_RS08040 (GF1_16300) | 1811636..1812055 | + | 420 | WP_267926011.1 | TraV family lipoprotein | - |
| GF1_RS08045 (GF1_16310) | 1812048..1812620 | + | 573 | WP_267926012.1 | HD-GYP domain-containing protein | - |
| GF1_RS08050 (GF1_16320) | 1812623..1815175 | + | 2553 | WP_267926013.1 | TraC family protein | - |
| GF1_RS08055 | 1815081..1817054 | + | 1974 | WP_267926014.1 | hypothetical protein | - |
| GF1_RS08060 | 1817054..1819708 | + | 2655 | WP_267926015.1 | conjugal transfer protein TraN | - |
| GF1_RS08065 (GF1_16360) | 1820271..1821428 | + | 1158 | WP_267926016.1 | Fic family protein | - |
| GF1_RS08070 (GF1_16370) | 1821843..1822022 | + | 180 | WP_267926017.1 | hypothetical protein | - |
| GF1_RS08075 (GF1_16380) | 1822233..1823624 | + | 1392 | WP_267926018.1 | ISNCY family transposase ISAcif1 | Transposase |
| GF1_RS08080 (GF1_16390) | 1823863..1824336 | + | 474 | WP_267926020.1 | hypothetical protein | - |
| GF1_RS08085 (GF1_16400) | 1824323..1825378 | + | 1056 | WP_267926021.1 | TraU family protein | - |
| GF1_RS08090 (GF1_16410) | 1825378..1826178 | + | 801 | WP_267926022.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| GF1_RS08095 (GF1_16420) | 1826196..1826456 | + | 261 | WP_267926023.1 | hypothetical protein | - |
| GF1_RS08100 (GF1_16430) | 1826553..1826831 | - | 279 | WP_267926024.1 | putative addiction module antidote protein | Antitoxin Detail |
| GF1_RS08105 (GF1_16440) | 1826835..1827134 | - | 300 | WP_267926025.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GF1_RS08110 (GF1_16450) | 1827184..1827528 | + | 345 | WP_267926026.1 | hypothetical protein | - |
| GF1_RS08115 (GF1_16460) | 1827491..1827976 | + | 486 | WP_267926027.1 | S26 family signal peptidase | - |
| GF1_RS08120 (GF1_16470) | 1827927..1828838 | + | 912 | WP_267926028.1 | conjugal transfer protein TraF | - |
| GF1_RS08125 (GF1_16480) | 1828817..1829536 | + | 720 | WP_267926029.1 | hypothetical protein | - |
| GF1_RS08130 (GF1_16490) | 1829617..1831089 | + | 1473 | WP_267926030.1 | conjugal transfer protein TraH | - |
| GF1_RS08135 (GF1_16500) | 1831325..1832134 | - | 810 | WP_267926031.1 | CsgG/HfaB family protein | - |
| GF1_RS08140 (GF1_16510) | 1832210..1833112 | - | 903 | WP_267926032.1 | PIN domain-containing protein | - |
| GF1_RS08145 (GF1_16520) | 1833360..1837646 | + | 4287 | WP_267926034.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| GF1_RS08150 (GF1_16530) | 1837800..1839143 | - | 1344 | WP_267926035.1 | group II intron reverse transcriptase/maturase | - |
| GF1_RS08155 | 1839721..1841625 | + | 1905 | WP_267926036.1 | hypothetical protein | - |
| GF1_RS08160 (GF1_16560) | 1841777..1842130 | + | 354 | WP_267926037.1 | PilZ domain-containing protein | - |
| GF1_RS08165 | 1842165..1842419 | + | 255 | WP_267926038.1 | hypothetical protein | - |
| GF1_RS08170 (GF1_16570) | 1842513..1842887 | + | 375 | WP_267926039.1 | PilZ domain-containing protein | - |
| GF1_RS08175 (GF1_16580) | 1843326..1843778 | + | 453 | WP_267926040.1 | hypothetical protein | - |
| GF1_RS08180 (GF1_16590) | 1843752..1844996 | - | 1245 | WP_267926041.1 | ISL3 family transposase ISDvu5 | Transposase |
| GF1_RS08185 (GF1_16600) | 1845019..1845492 | + | 474 | WP_267926042.1 | hypothetical protein | - |
| GF1_RS08190 (GF1_16610) | 1845719..1847077 | + | 1359 | WP_267926043.1 | IS5 family transposase ISNoc2 | Transposase |
| GF1_RS08195 | 1847139..1847414 | + | 276 | WP_267926044.1 | cytoplasmic protein | - |
| GF1_RS08200 (GF1_16630) | 1847474..1847950 | + | 477 | WP_267926045.1 | hypothetical protein | - |
| GF1_RS08205 (GF1_16640) | 1848204..1848701 | + | 498 | WP_267926046.1 | putative molybdenum carrier protein | - |
| GF1_RS08210 (GF1_16650) | 1848902..1849645 | + | 744 | WP_267926047.1 | SH3 domain-containing protein | - |
| GF1_RS08215 (GF1_16660) | 1849885..1850106 | - | 222 | WP_267926048.1 | DNA gyrase C-terminal beta-propeller domain-containing protein | - |
| GF1_RS08220 (GF1_16670) | 1850085..1851014 | - | 930 | WP_267926049.1 | hypothetical protein | - |
| GF1_RS08225 (GF1_16680) | 1851256..1851846 | - | 591 | WP_267929125.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| GF1_RS08230 (GF1_16690) | 1852176..1852493 | - | 318 | WP_267926050.1 | hypothetical protein | - |
| GF1_RS08235 (GF1_16700) | 1852480..1853133 | - | 654 | WP_267926051.1 | AAA family ATPase | - |
| GF1_RS08240 (GF1_16710) | 1853216..1854238 | - | 1023 | WP_267926053.1 | hypothetical protein | - |
| GF1_RS08245 (GF1_16720) | 1854201..1854458 | - | 258 | WP_267926054.1 | WGR domain-containing protein | - |
| GF1_RS08250 (GF1_16730) | 1854640..1854945 | - | 306 | WP_267926055.1 | HigA family addiction module antitoxin | - |
| GF1_RS08255 (GF1_16740) | 1854956..1855234 | - | 279 | WP_267926056.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GF1_RS08260 | 1855332..1856513 | - | 1182 | WP_267926057.1 | VWA-like domain-containing protein | - |
| GF1_RS08265 (GF1_16770) | 1856497..1857468 | - | 972 | WP_267926058.1 | DUF3150 domain-containing protein | - |
| GF1_RS08270 (GF1_16790) | 1857690..1858715 | - | 1026 | WP_267926059.1 | ATP-binding protein | - |
| GF1_RS08275 (GF1_16810) | 1859021..1859398 | - | 378 | WP_267926060.1 | hypothetical protein | - |
| GF1_RS08280 (GF1_16830) | 1859597..1859968 | - | 372 | WP_267926061.1 | hypothetical protein | - |
| GF1_RS08285 (GF1_16840) | 1860040..1860516 | - | 477 | WP_267926062.1 | DNA repair protein RadC | - |
| GF1_RS08290 (GF1_16850) | 1860679..1861947 | - | 1269 | WP_267926063.1 | group II intron reverse transcriptase/maturase | - |
| GF1_RS08295 (GF1_16860) | 1862731..1863129 | - | 399 | WP_267926064.1 | single-stranded DNA-binding protein | - |
| GF1_RS08300 (GF1_16870) | 1863227..1864192 | - | 966 | WP_267926065.1 | hypothetical protein | - |
| GF1_RS08305 (GF1_16880) | 1864285..1864521 | - | 237 | WP_267926066.1 | hypothetical protein | - |
| GF1_RS08310 (GF1_16890) | 1864699..1865361 | - | 663 | WP_267926068.1 | hypothetical protein | - |
| GF1_RS08315 | 1865737..1866141 | + | 405 | WP_267926069.1 | hypothetical protein | - |
| GF1_RS08320 (GF1_16900) | 1866116..1866748 | + | 633 | WP_267926070.1 | hypothetical protein | - |
| GF1_RS08325 | 1866729..1867193 | + | 465 | WP_267926072.1 | metal-dependent hydrolase | - |
| GF1_RS08330 (GF1_16910) | 1867193..1868548 | + | 1356 | WP_267926073.1 | TraM recognition domain-containing protein | - |
| GF1_RS08335 (GF1_16920) | 1868548..1869972 | + | 1425 | WP_267926074.1 | HD domain-containing protein | - |
| GF1_RS08340 (GF1_16930) | 1869985..1870710 | + | 726 | WP_267926076.1 | hypothetical protein | - |
| GF1_RS08345 (GF1_16940) | 1870741..1871139 | + | 399 | WP_267926077.1 | recombinase | - |
| GF1_RS08350 (GF1_16950) | 1871179..1871451 | + | 273 | WP_267926078.1 | HU family DNA-binding protein | - |
| GF1_RS08355 (GF1_16960) | 1871502..1871960 | - | 459 | WP_267926079.1 | MucR family transcriptional regulator | - |
| GF1_RS08360 | 1872122..1872763 | + | 642 | WP_267926080.1 | thermonuclease family protein | - |
| GF1_RS08365 (GF1_16970) | 1872975..1873172 | - | 198 | WP_267929161.1 | ISL3 family transposase ISCARN113 | Transposase |
| GF1_RS08370 (GF1_16980) | 1873104..1874183 | + | 1080 | WP_267929126.1 | ISL3 family transposase ISCARN113 | Transposase |
| GF1_RS08375 (GF1_16990) | 1874368..1875858 | + | 1491 | WP_267926081.1 | IS21 family transposase ISCth9 | Transposase |
| GF1_RS08380 (GF1_17000) | 1875855..1876688 | + | 834 | WP_267926082.1 | IS21 family transposase ISCth9 | Transposase |
| GF1_RS08385 (GF1_17010) | 1876783..1877007 | - | 225 | WP_267926084.1 | hypothetical protein | - |
| GF1_RS08390 (GF1_17020) | 1877399..1878451 | + | 1053 | WP_267926085.1 | XRE family transcriptional regulator | - |
| GF1_RS08395 (GF1_17030) | 1878448..1878951 | + | 504 | WP_267926088.1 | PIN domain-containing protein | - |
| GF1_RS08400 (GF1_17040) | 1879315..1880901 | - | 1587 | WP_267926090.1 | AAA family ATPase | - |
| GF1_RS08405 (GF1_17060) | 1881425..1882669 | + | 1245 | WP_267926041.1 | ISL3 family transposase ISDvu5 | Transposase |
| GF1_RS08410 (GF1_17070) | 1883820..1890080 | - | 6261 | WP_267926092.1 | DEAD/DEAH box helicase | - |
| GF1_RS08415 (GF1_17080) | 1890107..1893052 | - | 2946 | WP_267926094.1 | STY4851/ECs_5259 family protein | - |
| GF1_RS08420 | 1893007..1893480 | - | 474 | WP_267926095.1 | hypothetical protein | - |
| GF1_RS08425 | 1894346..1894525 | + | 180 | WP_267929162.1 | IS110 family transposase ISGsu4 | Transposase |
| GF1_RS08430 (GF1_17120) | 1895149..1896111 | - | 963 | WP_267926096.1 | hypothetical protein | - |
| GF1_RS08435 (GF1_17130) | 1896779..1897180 | - | 402 | WP_267926097.1 | IS200-IS605 family transposase ISAs26 | Transposase |
| GF1_RS08440 (GF1_17140) | 1897267..1897680 | + | 414 | WP_267926098.1 | IS200-IS605 family transposase ISMma22 | Transposase |
| GF1_RS08445 (GF1_17150) | 1897681..1898793 | + | 1113 | WP_267926099.1 | IS200-IS605 family transposase ISHhu4 | Transposase |
| GF1_RS08455 (GF1_17160) | 1900304..1900585 | - | 282 | Protein_1673 | HU family DNA-binding protein | - |
| GF1_RS08460 (GF1_17170) | 1900764..1901597 | - | 834 | WP_267926100.1 | ATP-dependent sacrificial sulfur transferase LarE | - |
| GF1_RS08465 (GF1_17180) | 1901603..1902802 | - | 1200 | WP_267926101.1 | homocysteine biosynthesis protein | - |
| GF1_RS08470 (GF1_17190) | 1903297..1904400 | + | 1104 | WP_267926102.1 | prephenate dehydratase | - |
| GF1_RS08475 (GF1_17200) | 1904414..1906258 | + | 1845 | WP_267926103.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| GF1_RS08480 (GF1_17210) | 1906530..1906730 | - | 201 | WP_267926104.1 | cold-shock protein | - |
| GF1_RS08485 (GF1_17220) | 1907055..1908098 | - | 1044 | WP_267926105.1 | GTP 3',8-cyclase MoaA | - |
| GF1_RS08490 (GF1_17230) | 1908511..1909515 | + | 1005 | WP_267926106.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| GF1_RS08495 (GF1_17240) | 1909589..1910020 | + | 432 | Protein_1681 | DUF2062 domain-containing protein | - |
| GF1_RS08500 (GF1_17250) | 1910114..1911007 | + | 894 | WP_267926107.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
| GF1_RS08505 (GF1_17270) | 1911021..1912183 | + | 1163 | Protein_1683 | iron-containing alcohol dehydrogenase | - |
| GF1_RS08510 (GF1_17280) | 1912509..1912739 | + | 231 | WP_267926108.1 | hypothetical protein | - |
| GF1_RS08515 (GF1_17290) | 1912766..1913848 | + | 1083 | WP_267929127.1 | hypothetical protein | VF |
| GF1_RS08520 (GF1_17310) | 1913808..1916375 | + | 2568 | WP_267926109.1 | DNA internalization-related competence protein ComEC/Rec2 | - |
| GF1_RS08525 (GF1_17320) | 1916501..1917034 | + | 534 | WP_267926110.1 | PilZ domain-containing protein | - |
| GF1_RS08530 (GF1_17330) | 1917049..1918131 | - | 1083 | WP_267926111.1 | type IV pilus twitching motility protein PilT | - |
| GF1_RS08535 (GF1_17340) | 1918289..1918480 | + | 192 | WP_267926112.1 | hypothetical protein | - |
| GF1_RS08540 (GF1_17350) | 1918730..1919413 | - | 684 | WP_267926113.1 | TIGR00730 family Rossman fold protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|