NZ_AP0241681..221076

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 221076 bp
Accession: NZ_AP024168        Location: 1..221076         Organism: Vibrio alfacsensis strain 04Ya108       Replicon: plasmid pYa108


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
VA249_RS23085 (VYA_44120) 553..1659 - 1107 WP_221072499.1 putative 2-aminoethylphosphonate ABC transporter ATP-binding protein -
VA249_RS23090 (VYA_44130) 1984..2994 - 1011 WP_221072501.1 putative 2-aminoethylphosphonate ABC transporter substrate-binding protein -
VA249_RS23095 (VYA_44140) 3261..4364 + 1104 WP_221072503.1 2-aminoethylphosphonate--pyruvate transaminase -
VA249_RS23100 (VYA_44150) 4391..5770 + 1380 WP_221072504.1 aspartate aminotransferase family protein -
VA249_RS23105 (VYA_44160) 5860..6675 + 816 WP_221072507.1 phosphonoacetaldehyde hydrolase -
VA249_RS23110 (VYA_44180) 7259..7795 + 537 WP_221072509.1 nuclear transport factor 2 family protein -
VA249_RS23115 (VYA_44190) 7889..8941 + 1053 WP_221072511.1 alpha/beta hydrolase -
VA249_RS23120 (VYA_44200) 9299..9835 + 537 WP_221072513.1 redoxin family protein -
VA249_RS23125 (VYA_44210) 9976..10341 - 366 WP_221072514.1 helix-turn-helix domain-containing protein -
VA249_RS23130 (VYA_44220) 10496..11080 - 585 WP_221072515.1 NAD(P)H-dependent oxidoreductase -
VA249_RS23135 (VYA_44230) 11615..12667 - 1053 WP_221072516.1 amino acid racemase -
VA249_RS23140 (VYA_44240) 13105..13860 - 756 WP_221072517.1 phosphatase PAP2 family protein -
VA249_RS23145 (VYA_44250) 14242..15627 - 1386 WP_199453839.1 amidohydrolase family protein -
VA249_RS23150 (VYA_44260) 15759..16763 - 1005 WP_221072518.1 helix-turn-helix transcriptional regulator -
VA249_RS23155 (VYA_44270) 16904..17296 + 393 WP_221072519.1 hypothetical protein -
VA249_RS23160 (VYA_44280) 17432..18418 + 987 WP_221072520.1 hypothetical protein -
VA249_RS23165 (VYA_44290) 18367..18729 + 363 WP_221072521.1 carbohydrate porin -
VA249_RS23170 (VYA_44300) 18909..19748 + 840 WP_199453833.1 hypothetical protein -
VA249_RS23175 (VYA_44340) 21990..22400 + 411 WP_221072522.1 hypothetical protein -
VA249_RS23180 22659..22796 + 138 WP_221072523.1 hypothetical protein -
VA249_RS23185 (VYA_44350) 23219..24154 - 936 WP_221072526.1 OB-fold domain-containing protein -
VA249_RS23190 (VYA_44360) 24158..25369 - 1212 WP_221072528.1 thiolase family protein -
VA249_RS23195 (VYA_44370) 25386..27275 - 1890 WP_225927173.1 long-chain-acyl-CoA synthetase -
VA249_RS23200 (VYA_44380) 27593..28423 + 831 WP_221072666.1 alpha/beta hydrolase -
VA249_RS23205 (VYA_44390) 28442..30559 + 2118 WP_221072531.1 FAD-dependent oxidoreductase -
VA249_RS23210 (VYA_44400) 30644..32065 + 1422 WP_221072533.1 coniferyl aldehyde dehydrogenase -
VA249_RS23215 (VYA_44410) 32843..33919 - 1077 WP_210205399.1 replication initiation protein -
VA249_RS23220 (VYA_44420) 34590..36989 - 2400 WP_221072535.1 MMPL family transporter -
VA249_RS23225 (VYA_44430) 37007..38017 - 1011 WP_221072537.1 YCF48-related protein -
VA249_RS23230 (VYA_44440) 38261..39784 - 1524 WP_225927169.1 DUF1302 family protein -
VA249_RS23235 (VYA_44450) 39800..41185 - 1386 WP_221072539.1 DUF1329 domain-containing protein -
VA249_RS23240 (VYA_44460) 41434..42402 + 969 WP_221072541.1 flavin reductase -
VA249_RS23245 (VYA_44470) 42413..43210 + 798 WP_221072551.1 fumarylacetoacetate hydrolase family protein -
VA249_RS23250 (VYA_44480) 43257..44159 + 903 WP_128813540.1 acetaldehyde dehydrogenase (acetylating) -
VA249_RS23255 (VYA_44490) 44170..45192 + 1023 WP_221072553.1 4-hydroxy-2-oxovalerate aldolase -
VA249_RS23260 (VYA_44500) 45215..45994 + 780 WP_210205301.1 SDR family oxidoreductase -
VA249_RS23265 (VYA_44510) 46443..47519 - 1077 WP_221072555.1 ParB family protein -
VA249_RS23270 (VYA_44520) 47519..48718 - 1200 WP_128813537.1 ParA family protein -
VA249_RS23275 (VYA_44530) 48926..50017 - 1092 WP_221072564.1 Rieske 2Fe-2S domain-containing protein -
VA249_RS23280 (VYA_44540) 50010..51398 - 1389 WP_221072566.1 MFS transporter -
VA249_RS23285 (VYA_44550) 51647..52735 + 1089 WP_221072569.1 MBL fold metallo-hydrolase -
VA249_RS23290 (VYA_44560) 52749..54464 + 1716 WP_221072570.1 class I adenylate-forming enzyme family protein -
VA249_RS23295 (VYA_44570) 54508..56265 + 1758 WP_221072572.1 FAD-binding protein -
VA249_RS23300 (VYA_44580) 56295..57893 + 1599 WP_221072574.1 FadD3 family acyl-CoA ligase -
VA249_RS23305 (VYA_44590) 58038..58853 + 816 WP_221072576.1 SDR family NAD(P)-dependent oxidoreductase -
VA249_RS23310 (VYA_44600) 58864..59997 + 1134 WP_225927170.1 alkene reductase -
VA249_RS23315 (VYA_44610) 60013..60744 + 732 WP_221072577.1 SDR family NAD(P)-dependent oxidoreductase -
VA249_RS23320 (VYA_44620) 60755..61390 + 636 WP_221072578.1 nuclear transport factor 2 family protein -
VA249_RS23325 (VYA_44630) 61901..62629 + 729 WP_221072579.1 PEP-CTERM sorting domain-containing protein -
VA249_RS23330 (VYA_44640) 63060..67136 + 4077 WP_221072581.1 ImpA family metalloprotease -
VA249_RS23335 (VYA_44650) 67418..68203 + 786 WP_221072673.1 SDR family oxidoreductase -
VA249_RS23340 (VYA_44660) 68216..68677 + 462 WP_221072583.1 MaoC family dehydratase -
VA249_RS23345 (VYA_44670) 68694..69899 + 1206 WP_221072586.1 thiolase family protein -
VA249_RS23350 (VYA_44680) 69911..70720 + 810 WP_221072588.1 enoyl-CoA hydratase-related protein -
VA249_RS23355 (VYA_44690) 70737..72377 + 1641 WP_221072590.1 electron transfer flavoprotein-ubiquinone oxidoreductase -
VA249_RS23360 (VYA_44700) 72444..73349 - 906 WP_221072591.1 sensor domain-containing diguanylate cyclase -
VA249_RS23365 (VYA_44710) 73659..74570 + 912 WP_225927171.1 PEP-CTERM sorting domain-containing protein -
VA249_RS23370 (VYA_44720) 74766..75527 - 762 WP_225927172.1 serine protease -
VA249_RS23375 (VYA_44730) 75548..78319 - 2772 WP_221072594.1 PEP-CTERM system TPR-repeat protein PrsT -
VA249_RS23380 (VYA_44740) 78539..79693 + 1155 WP_221072605.1 GNAT family N-acetyltransferase -
VA249_RS23385 (VYA_44750) 79734..81212 + 1479 WP_221072607.1 oligosaccharide flippase family protein -
VA249_RS23390 (VYA_44760) 81305..83089 + 1785 WP_221072609.1 ATP-grasp domain-containing protein -
VA249_RS23395 (VYA_44770) 83086..84093 + 1008 WP_221072611.1 hypothetical protein -
VA249_RS23400 (VYA_44780) 84090..85601 + 1512 WP_221072614.1 oligosaccharide flippase family protein -
VA249_RS23405 (VYA_44790) 85717..86772 - 1056 WP_221072616.1 glycosyltransferase family 2 protein -
VA249_RS23410 (VYA_44800) 86781..87557 - 777 WP_221072618.1 hypothetical protein -
VA249_RS23415 (VYA_44810) 87554..88564 - 1011 WP_221072619.1 glycosyltransferase family A protein -
VA249_RS23420 (VYA_44820) 88634..89557 - 924 WP_221072621.1 polysaccharide pyruvyl transferase family protein -
VA249_RS23425 (VYA_44830) 89606..90655 - 1050 WP_221072624.1 glycosyltransferase family 2 protein -
VA249_RS23430 90899..92926 + 2028 WP_221072627.1 PEP-CTERM system histidine kinase PrsK -
VA249_RS23435 (VYA_44860) 93064..94401 + 1338 WP_221072678.1 PEP-CTERM-box response regulator transcription factor -
VA249_RS23440 94447..95718 + 1272 WP_221072629.1 hypothetical protein -
VA249_RS23445 (VYA_44870) 95990..96994 + 1005 WP_221072631.1 tyrosine-type recombinase/integrase -
VA249_RS23450 96996..98312 - 1317 WP_221072633.1 putative O-glycosylation ligase, exosortase A system-associated -
VA249_RS23455 (VYA_44880) 98399..99529 - 1131 WP_221072635.1 glycosyltransferase -
VA249_RS23460 (VYA_44890) 99728..100756 + 1029 WP_221072636.1 GHMP kinase -
VA249_RS23465 (VYA_44900) 100744..101334 + 591 WP_128813629.1 D-sedoheptulose 7-phosphate isomerase -
VA249_RS23475 (VYA_44910) 101318..102054 + 737 Protein_78 nucleotidyltransferase family protein -
VA249_RS23480 (VYA_44920) 102051..102989 + 939 WP_221072651.1 hypothetical protein -
VA249_RS23485 (VYA_44930) 103071..104495 + 1425 WP_221072653.1 UbiA family prenyltransferase -
VA249_RS23490 (VYA_44940) 104492..104860 + 369 WP_128813625.1 EamA family transporter -
VA249_RS23495 104872..106332 + 1461 WP_221072655.1 hypothetical protein -
VA249_RS23500 (VYA_44970) 106500..107114 + 615 WP_221072658.1 hypothetical protein -
VA249_RS23505 (VYA_44980) 107157..108488 - 1332 WP_221072660.1 hypothetical protein -
VA249_RS23510 (VYA_44990) 108544..109974 - 1431 WP_221072662.1 hypothetical protein -
VA249_RS23515 (VYA_45000) 109967..110782 - 816 WP_221072664.1 XrtA-associated tyrosine autokinase -
VA249_RS23520 (VYA_45010) 110799..112364 - 1566 WP_221072362.1 hypothetical protein -
VA249_RS23525 (VYA_45020) 112382..113032 - 651 WP_221072364.1 polysaccharide export protein -
VA249_RS23530 (VYA_45030) 113770..115170 + 1401 WP_221072366.1 TIGR03013 family PEP-CTERM/XrtA system glycosyltransferase -
VA249_RS23535 (VYA_45040) 115175..116113 + 939 WP_221072368.1 DUF3473 domain-containing protein -
VA249_RS23540 (VYA_45050) 116043..117086 + 1044 WP_221072370.1 FemAB family PEP-CTERM system-associated protein -
VA249_RS23545 (VYA_45060) 117090..118307 + 1218 WP_221072371.1 TIGR03087 family PEP-CTERM/XrtA system glycosyltransferase -
VA249_RS23550 (VYA_45070) 118312..119736 + 1425 WP_221072373.1 exosortase A -
VA249_RS23555 (VYA_45080) 119751..121631 + 1881 WP_221072375.1 amidotransferase 1, exosortase A system-associated -
VA249_RS23560 (VYA_45090) 121637..122866 + 1230 WP_221072378.1 glycosyltransferase family 4 protein -
VA249_RS23565 (VYA_45100) 122890..124059 + 1170 WP_221072379.1 glycosyltransferase family 4 protein -
VA249_RS23570 (VYA_45110) 124075..125172 + 1098 WP_221072380.1 glycosyltransferase family 4 protein -
VA249_RS23575 (VYA_45120) 125185..126054 + 870 WP_221072381.1 glycosyltransferase family 2 protein -
VA249_RS23580 (VYA_45130) 126089..127102 + 1014 WP_221072382.1 glycosyltransferase -
VA249_RS23585 (VYA_45140) 127228..127842 + 615 WP_221072383.1 3'-5' exonuclease -
VA249_RS23590 (VYA_45150) 127869..128951 - 1083 WP_221072384.1 CDP-glycerol glycerophosphotransferase family protein -
VA249_RS23595 (VYA_45160) 129142..129921 - 780 WP_221072385.1 phosphocholine cytidylyltransferase family protein -
VA249_RS23600 (VYA_45170) 129918..130547 - 630 WP_221072386.1 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein -
VA249_RS23605 (VYA_45180) 130544..133444 - 2901 WP_225927160.1 PEP-utilizing enzyme -
VA249_RS23610 (VYA_45190) 134001..134909 + 909 WP_221072389.1 sulfate adenylyltransferase subunit CysD -
VA249_RS23615 (VYA_45200) 134955..136406 + 1452 WP_221072391.1 sulfate adenylyltransferase subunit CysN -
VA249_RS23620 (VYA_45210) 136471..138195 + 1725 WP_221072393.1 SLC13 family permease -
VA249_RS23625 (VYA_45220) 138325..139452 - 1128 WP_221072395.1 acyl-CoA dehydrogenase family protein -
VA249_RS23630 (VYA_45230) 139465..140673 - 1209 WP_221072397.1 acyl-CoA dehydrogenase family protein -
VA249_RS23635 (VYA_45240) 140690..141856 - 1167 WP_221072399.1 acyl-CoA dehydrogenase family protein -
VA249_RS23640 (VYA_45250) 141865..143040 - 1176 WP_221072401.1 lipid-transfer protein -
VA249_RS23645 (VYA_45260) 143052..143474 - 423 WP_128813593.1 MaoC family dehydratase -
VA249_RS23650 (VYA_45270) 143455..144564 - 1110 WP_221072404.1 acyl-CoA dehydrogenase family protein -
VA249_RS23655 (VYA_45280) 144564..145535 - 972 WP_221072405.1 OB-fold domain-containing protein -
VA249_RS23660 (VYA_45290) 145575..146339 - 765 WP_221072407.1 SDR family oxidoreductase -
VA249_RS23665 (VYA_45300) 146485..147261 + 777 WP_221072408.1 enoyl-CoA hydratase -
VA249_RS23670 (VYA_45310) 147432..148604 - 1173 WP_210205370.1 helix-turn-helix transcriptional regulator -
VA249_RS23675 (VYA_45320) 148671..149630 - 960 WP_221072411.1 FAD-binding protein -
VA249_RS23680 (VYA_45330) 149640..150389 - 750 WP_221072413.1 electron transfer flavoprotein subunit beta/FixA family protein -
VA249_RS23685 (VYA_45340) 150568..151314 - 747 WP_221072415.1 hypothetical protein -
VA249_RS23690 (VYA_45350) 151529..152008 - 480 WP_221072417.1 ATP-binding protein -
VA249_RS23695 (VYA_45360) 152079..153272 - 1194 WP_221072419.1 MFS transporter -
VA249_RS23700 (VYA_45370) 153381..154304 + 924 WP_221072421.1 helix-turn-helix domain-containing protein -
VA249_RS23705 (VYA_45380) 154323..155351 - 1029 WP_221072423.1 ferredoxin--NADP reductase -
VA249_RS23710 (VYA_45390) 155379..156599 - 1221 WP_221072425.1 hypothetical protein -
VA249_RS23715 (VYA_45400) 156844..157890 - 1047 WP_225927161.1 alpha/beta hydrolase -
VA249_RS23720 (VYA_45410) 158219..159013 - 795 WP_221072427.1 hypothetical protein -
VA249_RS23725 (VYA_45420) 159142..160596 - 1455 WP_221072428.1 DUF1214 domain-containing protein -
VA249_RS23730 (VYA_45430) 160669..160974 - 306 WP_225927162.1 hypothetical protein -
VA249_RS23735 (VYA_45440) 161184..162971 + 1788 WP_221072432.1 protein translocase subunit SecD -
VA249_RS23740 (VYA_45450) 162971..163873 + 903 WP_104029171.1 protein translocase subunit SecF -
VA249_RS23745 (VYA_45460) 164140..165231 + 1092 WP_221072434.1 calcium:proton antiporter -
VA249_RS23750 (VYA_45470) 165289..165945 + 657 WP_221072436.1 DedA family protein -
VA249_RS23755 (VYA_45480) 165990..167381 + 1392 WP_221072437.1 magnesium transporter -
VA249_RS23760 (VYA_45490) 167418..168068 + 651 WP_221072439.1 MarC family NAAT transporter -
VA249_RS23765 (VYA_45500) 168451..169377 + 927 WP_221072441.1 LysR family transcriptional regulator -
VA249_RS23770 (VYA_45510) 169481..171151 - 1671 WP_225927163.1 mechanosensitive ion channel family protein -
VA249_RS23775 (VYA_45520) 171490..172533 - 1044 WP_221072444.1 alpha/beta hydrolase -
VA249_RS23780 (VYA_45530) 173139..174140 - 1002 WP_221072446.1 hypothetical protein -
VA249_RS23785 (VYA_45540) 174152..175213 - 1062 WP_221072448.1 HlyD family secretion protein -
VA249_RS23790 (VYA_45550) 175283..176407 - 1125 WP_221072450.1 AI-2E family transporter -
VA249_RS23795 (VYA_45560) 176683..177699 + 1017 WP_221072452.1 helix-turn-helix domain-containing protein -
VA249_RS23800 (VYA_45570) 177949..178281 + 333 WP_221072454.1 SEC-C metal-binding domain-containing protein -
VA249_RS23805 (VYA_45580) 178344..178613 - 270 WP_221072682.1 Txe/YoeB family addiction module toxin Toxin Detail
VA249_RS23810 (VYA_45590) 178606..178860 - 255 WP_221072456.1 type II toxin-antitoxin system prevent-host-death family antitoxin Antitoxin Detail
VA249_RS23815 (VYA_45600) 179004..180593 - 1590 WP_221072458.1 amidase -
VA249_RS23820 (VYA_45610) 180595..181473 - 879 WP_221072460.1 SDR family oxidoreductase -
VA249_RS23825 (VYA_45620) 181530..182681 - 1152 WP_221072462.1 acetyl-CoA C-acetyltransferase -
VA249_RS23830 (VYA_45630) 182681..183751 - 1071 WP_221072464.1 acyl-CoA dehydrogenase family protein -
VA249_RS23835 (VYA_45640) 183760..184911 - 1152 WP_221072465.1 acyl-CoA dehydrogenase family protein -
VA249_RS23840 (VYA_45650) 184930..185703 - 774 WP_221072466.1 enoyl-CoA hydratase family protein -
VA249_RS23845 (VYA_45660) 185704..186798 - 1095 WP_128813569.1 nitronate monooxygenase -
VA249_RS23850 (VYA_45670) 186804..187685 - 882 WP_221072467.1 enoyl-CoA hydratase -
VA249_RS23855 (VYA_45680) 187682..188512 - 831 WP_221072468.1 hypothetical protein -
VA249_RS23860 (VYA_45690) 188524..189399 - 876 WP_221072469.1 CoA-transferase -
VA249_RS23865 (VYA_45700) 189401..190291 - 891 WP_221072470.1 VOC family protein -
VA249_RS23870 (VYA_45710) 190621..191433 + 813 WP_221072471.1 hypothetical protein -
VA249_RS23875 (VYA_45730) 191720..192616 + 897 WP_221072472.1 HprK-related kinase A -
VA249_RS23880 (VYA_45740) 192600..193688 + 1089 WP_128813562.1 nucleotidyltransferase family protein -
VA249_RS24185 (VYA_45750) 193714..193887 + 174 WP_225927164.1 IclR family transcriptional regulator C-terminal domain-containing protein -
VA249_RS23890 (VYA_45760) 193998..194549 + 552 WP_221072474.1 SDR family oxidoreductase -
VA249_RS23895 (VYA_45770) 194629..194874 + 246 WP_225927165.1 hypothetical protein -
VA249_RS23900 (VYA_45780) 195120..196037 + 918 WP_221072476.1 LysR family transcriptional regulator -
VA249_RS23905 (VYA_45790) 196114..197538 - 1425 WP_221072684.1 phospholipase D family protein -
VA249_RS23910 (VYA_45800) 197732..198910 - 1179 WP_221072478.1 C45 family peptidase -
VA249_RS23915 (VYA_45810) 199219..201204 - 1986 WP_221072686.1 carboxylesterase family protein -
VA249_RS23920 (VYA_45820) 201443..202411 - 969 WP_221072480.1 linear amide C-N hydrolase -
VA249_RS23925 (VYA_45830) 202686..203876 - 1191 WP_225927166.1 BamA/TamA family outer membrane protein -
VA249_RS23930 (VYA_45840) 203993..204634 - 642 WP_221072481.1 TRIC cation channel family protein -
VA249_RS23935 (VYA_45850) 204727..205908 - 1182 WP_221072482.1 patatin-like phospholipase family protein -
VA249_RS23940 (VYA_45860) 206138..207784 - 1647 WP_225927167.1 hypothetical protein -
VA249_RS23945 (VYA_45870) 207997..209697 - 1701 WP_221072483.1 autotransporter assembly complex family protein -
VA249_RS23950 (VYA_45880) 209861..211429 - 1569 WP_221072484.1 amidohydrolase family protein -
VA249_RS23955 (VYA_45890) 211674..212420 - 747 WP_225927168.1 hypothetical protein -
VA249_RS23960 (VYA_45900) 212801..213832 + 1032 WP_221072485.1 IS110 family transposase -
VA249_RS23965 (VYA_45910) 214077..214283 - 207 WP_221072486.1 hypothetical protein -
VA249_RS23970 (VYA_45920) 214385..214645 + 261 WP_221072487.1 type II toxin-antitoxin system Phd/YefM family antitoxin -
VA249_RS23975 (VYA_45930) 214645..214947 + 303 WP_221072488.1 type II toxin-antitoxin system RelE/ParE family toxin -
VA249_RS23980 (VYA_45940) 215140..215367 + 228 WP_221072490.1 hypothetical protein -
VA249_RS23985 (VYA_45950) 215494..216594 - 1101 WP_221072492.1 Fic family protein -
VA249_RS23990 (VYA_45960) 216719..217054 - 336 WP_221072493.1 hypothetical protein -
VA249_RS24190 217941..218146 + 206 Protein_182 transposase zinc-binding domain-containing protein -
VA249_RS23995 (VYA_45970) 218213..219115 - 903 WP_221072495.1 EamA family transporter -
VA249_RS24000 (VYA_45980) 219182..219886 - 705 WP_128813561.1 phosphonate utilization transcriptional regulator PhnR -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance