MGE detailed information
MGE type: Prophage MGE length: 50502 bp
Accession: NZ_AP024159 Location: 1932183..1982684 Organism: Ralstonia solanacearum strain MAFF 211479 Replicon: chromosome
Accession: NZ_AP024159 Location: 1932183..1982684 Organism: Ralstonia solanacearum strain MAFF 211479 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JL097_RS09100 () | 1927397..1928605 | + | 1209 | WP_197368582.1 | efflux RND transporter periplasmic adaptor subunit | - |
| JL097_RS09105 () | 1928672..1931791 | + | 3120 | WP_019718736.1 | efflux RND transporter permease subunit | - |
| JL097_RS09115 () | 1932183..1933187 | + | 1005 | WP_071623735.1 | hypothetical protein ; Integrase | Integrase |
| JL097_RS09120 () | 1933188..1933496 | - | 309 | WP_071623736.1 | hypothetical protein | - |
| JL097_RS09125 () | 1933551..1935029 | - | 1479 | WP_071623737.1 | hypothetical protein | - |
| JL097_RS09130 () | 1935031..1935831 | - | 801 | WP_071623738.1 | PRTRC system ThiF family protein | - |
| JL097_RS09135 () | 1935828..1936613 | - | 786 | WP_071623739.1 | PRTRC system protein A | - |
| JL097_RS09140 () | 1936615..1937337 | - | 723 | WP_071623740.1 | PRTRC system protein B | - |
| JL097_RS09145 () | 1937345..1938394 | - | 1050 | WP_197368583.1 | PRTRC system protein F | - |
| JL097_RS09150 () | 1938391..1938780 | - | 390 | WP_071623742.1 | PRTRC system protein C | - |
| JL097_RS09155 () | 1938793..1939383 | - | 591 | WP_197368584.1 | PRTRC system protein E | - |
| JL097_RS09160 () | 1939409..1939645 | - | 237 | WP_071623744.1 | hypothetical protein | - |
| JL097_RS09165 () | 1939642..1940073 | - | 432 | WP_071623745.1 | hypothetical protein | - |
| JL097_RS09170 () | 1940083..1940298 | - | 216 | WP_103025750.1 | hypothetical protein | - |
| JL097_RS09175 () | 1940304..1940456 | - | 153 | WP_172840140.1 | hypothetical protein | - |
| JL097_RS09180 () | 1940453..1940890 | - | 438 | WP_078222098.1 | hypothetical protein | - |
| JL097_RS09185 () | 1940887..1941261 | - | 375 | WP_103025748.1 | hypothetical protein | - |
| JL097_RS09190 () | 1941270..1941407 | - | 138 | WP_197372500.1 | hypothetical protein | - |
| JL097_RS09195 () | 1941956..1942576 | - | 621 | WP_197368602.1 | hypothetical protein | - |
| JL097_RS09200 () | 1942859..1943383 | - | 525 | WP_078222094.1 | helix-turn-helix domain-containing protein | - |
| JL097_RS09205 () | 1944142..1944342 | - | 201 | WP_197368586.1 | hypothetical protein | - |
| JL097_RS09210 () | 1944437..1944952 | + | 516 | WP_197368587.1 | hypothetical protein | - |
| JL097_RS09215 () | 1944967..1945440 | - | 474 | WP_197368588.1 | hypothetical protein | - |
| JL097_RS09220 () | 1945709..1946065 | + | 357 | WP_197368603.1 | hypothetical protein | - |
| JL097_RS09225 () | 1946074..1946271 | + | 198 | WP_197368589.1 | hypothetical protein | - |
| JL097_RS09230 () | 1946268..1947302 | + | 1035 | WP_197368590.1 | hypothetical protein | - |
| JL097_RS09235 () | 1947299..1947595 | + | 297 | WP_071623753.1 | hypothetical protein | - |
| JL097_RS09240 () | 1947619..1948221 | + | 603 | WP_071623754.1 | hypothetical protein | - |
| JL097_RS09245 () | 1948405..1948779 | + | 375 | WP_011001621.1 | HNH endonuclease | - |
| JL097_RS09250 () | 1949204..1949545 | + | 342 | WP_049832880.1 | hypothetical protein | - |
| JL097_RS09255 () | 1949590..1951260 | + | 1671 | WP_071623755.1 | terminase large subunit | - |
| JL097_RS09260 () | 1951263..1951421 | + | 159 | WP_011001622.1 | hypothetical protein | - |
| JL097_RS09265 () | 1951418..1952641 | + | 1224 | WP_071623756.1 | phage portal protein | - |
| JL097_RS09270 () | 1952649..1953260 | + | 612 | WP_071623757.1 | HK97 family phage prohead protease | - |
| JL097_RS09275 () | 1953271..1954509 | + | 1239 | WP_011001625.1 | phage major capsid protein | - |
| JL097_RS09280 () | 1954542..1954865 | + | 324 | WP_078222088.1 | head-tail connector protein | - |
| JL097_RS09285 () | 1954873..1955199 | + | 327 | WP_072633576.1 | phage head closure protein | - |
| JL097_RS09290 () | 1955202..1955705 | + | 504 | WP_197368591.1 | HK97 gp10 family phage protein | - |
| JL097_RS09295 () | 1955695..1956048 | + | 354 | WP_071623760.1 | DUF3168 domain-containing protein | - |
| JL097_RS09300 () | 1956112..1956765 | + | 654 | WP_071623761.1 | phage tail protein | - |
| JL097_RS09305 () | 1956771..1957091 | + | 321 | WP_071623762.1 | hypothetical protein | - |
| JL097_RS09310 () | 1957139..1957399 | + | 261 | WP_197368604.1 | DUF1799 domain-containing protein | - |
| JL097_RS09315 () | 1957401..1960274 | + | 2874 | WP_197368592.1 | phage tail tape measure protein | - |
| JL097_RS09320 () | 1960277..1960615 | + | 339 | WP_197368593.1 | phage tail protein | - |
| JL097_RS09325 () | 1960612..1961247 | + | 636 | WP_072633584.1 | phage tail protein | - |
| JL097_RS09330 () | 1961253..1961849 | + | 597 | WP_197368594.1 | tail fiber assembly protein | - |
| JL097_RS09335 () | 1961846..1962547 | + | 702 | WP_197368595.1 | phage minor tail protein L | - |
| JL097_RS09340 () | 1962549..1963259 | + | 711 | WP_197368596.1 | C40 family peptidase | - |
| JL097_RS09345 () | 1963263..1963865 | + | 603 | WP_087451243.1 | tail assembly protein | - |
| JL097_RS09350 () | 1964031..1964369 | - | 339 | WP_197368597.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| JL097_RS09355 () | 1964366..1964620 | - | 255 | WP_197342763.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| JL097_RS09360 () | 1964671..1967826 | + | 3156 | WP_197368598.1 | host specificity protein J | - |
| JL097_RS09365 () | 1967826..1968137 | + | 312 | WP_071623779.1 | hypothetical protein | - |
| JL097_RS09370 () | 1968163..1968819 | + | 657 | WP_072633591.1 | hypothetical protein | - |
| JL097_RS09375 () | 1968888..1969379 | + | 492 | WP_011001641.1 | glycoside hydrolase family protein | - |
| JL097_RS09380 () | 1969379..1969687 | + | 309 | WP_011001642.1 | hypothetical protein | - |
| JL097_RS09385 () | 1969690..1969965 | + | 276 | WP_081365332.1 | hypothetical protein | - |
| JL097_RS09390 () | 1969965..1970510 | + | 546 | WP_071623774.1 | lysis protein | - |
| JL097_RS09395 () | 1970826..1971683 | - | 858 | WP_197368599.1 | hypothetical protein | - |
| JL097_RS09400 () | 1971813..1972115 | - | 303 | WP_071623782.1 | hypothetical protein | - |
| JL097_RS09405 () | 1972147..1973184 | - | 1038 | WP_071623781.1 | LysM peptidoglycan-binding domain-containing protein | - |
| JL097_RS09410 () | 1973681..1973875 | + | 195 | WP_011001649.1 | hypothetical protein | - |
| JL097_RS09415 () | 1973947..1975920 | + | 1974 | WP_197383723.1 | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | - |
| JL097_RS09420 () | 1976175..1977524 | + | 1350 | WP_011001651.1 | trigger factor | - |
| JL097_RS09425 () | 1977554..1978207 | + | 654 | WP_003267806.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| JL097_RS09430 () | 1978373..1979647 | + | 1275 | WP_011001652.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | - |
| JL097_RS09435 () | 1979818..1982238 | + | 2421 | WP_011001653.1 | endopeptidase La | - |
| JL097_RS09440 () | 1982412..1982684 | + | 273 | WP_003267811.1 | HU family DNA-binding protein | - |
| JL097_RS09455 () | 1983107..1985053 | + | 1947 | WP_197369505.1 | SurA N-terminal domain-containing protein | - |
| JL097_RS09460 () | 1985114..1985806 | - | 693 | WP_197369506.1 | signal peptidase I | - |
| JL097_RS09465 () | 1985883..1986503 | - | 621 | WP_020832084.1 | arylesterase | - |
| JL097_RS09470 () | 1986577..1987287 | + | 711 | WP_011001657.1 | ABC transporter ATP-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|