MGE detailed information
MGE type: Genomic_island MGE length: 52184 bp
Accession: NZ_AP024130 Location: 3837414..3889597 Organism: Escherichia coli strain SI-NP020 Replicon: chromosome
Accession: NZ_AP024130 Location: 3837414..3889597 Organism: Escherichia coli strain SI-NP020 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FFK26_RS18570 (3833131) | 3833131..3833796 | + | 666 | WP_001209088.1 | protein YkgH | - |
| FFK26_RS18575 (3834042) | 3834042..3834737 | - | 696 | WP_001358288.1 | lactate utilization protein C | - |
| FFK26_RS18580 (3834730) | 3834730..3836157 | - | 1428 | WP_000023906.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| FFK26_RS18585 (3836168) | 3836168..3836887 | - | 720 | WP_001102119.1 | (Fe-S)-binding protein | - |
| FFK26_RS18590 (3837414) | 3837414..3838268 | - | 855 | WP_000339598.1 | RCS-specific HTH-type transcriptional activator RclR | VF |
| FFK26_RS18595 (3838494) | 3838494..3839819 | + | 1326 | WP_001046314.1 | reactive chlorine resistance oxidoreductase RclA | - |
| FFK26_RS18600 (3839928) | 3839928..3840164 | + | 237 | WP_000474084.1 | reactive chlorine resistance periplasmic protein RclB | - |
| FFK26_RS18605 (3840176) | 3840176..3840769 | + | 594 | WP_001299021.1 | reactive chlorine species resistance protein RclC | - |
| FFK26_RS18610 (3840929) | 3840929..3841798 | - | 870 | WP_001299025.1 | aldo/keto reductase | - |
| FFK26_RS18615 (3842047) | 3842047..3842904 | + | 858 | WP_001446389.1 | Right origin-binding protein | VF |
| FFK26_RS18620 (3843025) | 3843025..3847278 | - | 4254 | WP_000092537.1 | Invasin | VF |
| FFK26_RS24400 (3847831) | 3847831..3847920 | + | 90 | Protein_3656 | hypothetical protein | - |
| FFK26_RS18625 (3848394) | 3848394..3848495 | + | 102 | WP_000662258.1 | small membrane protein YkgR | - |
| FFK26_RS18630 (3848858) | 3848858..3849121 | + | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| FFK26_RS18635 (3849121) | 3849121..3849261 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| FFK26_RS18640 (3849296) | 3849296..3849523 | - | 228 | WP_001147279.1 | protein YkgL | - |
| FFK26_RS18645 (3850346) | 3850346..3850888 | + | 543 | WP_001296902.1 | HTH-type transcriptional regulator EcpR | VF |
| FFK26_RS18650 (3850963) | 3850963..3851550 | + | 588 | WP_000730972.1 | Common pilus major fimbrillin subunit EcpA | VF |
| FFK26_RS18655 (3851608) | 3851608..3852276 | + | 669 | WP_000716398.1 | putative fimbrial chaperone EcpB | VF |
| FFK26_RS18660 (3852302) | 3852302..3854827 | + | 2526 | WP_001131092.1 | putative outer membrane usher protein EcpC | VF |
| FFK26_RS18665 (3854817) | 3854817..3856460 | + | 1644 | WP_001446388.1 | Fimbria adhesin EcpD | VF |
| FFK26_RS18670 (3856429) | 3856429..3857139 | + | 711 | WP_001296887.1 | putative fimbrial chaperone EcpE | VF |
| FFK26_RS18675 (3857452) | 3857452..3857781 | + | 330 | WP_001303809.1 | YkgJ family cysteine cluster protein | - |
| FFK26_RS18680 (3858029) | 3858029..3858643 | - | 615 | WP_001019920.1 | YagU family protein | - |
| FFK26_RS18685 (3859061) | 3859061..3859750 | + | 690 | WP_000070694.1 | aldehyde dehydrogenase iron-sulfur subunit PaoA | - |
| FFK26_RS18690 (3859747) | 3859747..3860703 | + | 957 | WP_000643328.1 | aldehyde oxidoreductase FAD-binding subunit PaoB | - |
| FFK26_RS18695 (3860700) | 3860700..3862898 | + | 2199 | WP_000667026.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| FFK26_RS18700 (3862908) | 3862908..3863864 | + | 957 | WP_137564198.1 | molybdenum cofactor insertion chaperone PaoD | - |
| FFK26_RS18705 (3863915) | 3863915..3864253 | + | 339 | Protein_3673 | LysR substrate-binding domain-containing protein | - |
| FFK26_RS18710 (3864591) | 3864591..3865910 | + | 1320 | WP_000144688.1 | Prophage integrase IntA ; Integrase | Integrase |
| FFK26_RS18715 (3866003) | 3866003..3866851 | - | 849 | WP_000014502.1 | DUF4942 domain-containing protein | - |
| FFK26_RS18720 (3866948) | 3866948..3867145 | - | 198 | WP_000772024.1 | DUF957 domain-containing protein | - |
| FFK26_RS18725 (3867165) | 3867165..3867653 | - | 489 | WP_000761700.1 | DUF5983 family protein | - |
| FFK26_RS18730 (3867650) | 3867650..3868027 | - | 378 | WP_000854828.1 | TA system toxin CbtA family protein | Toxin Detail |
| FFK26_RS18735 (3868117) | 3868117..3868485 | - | 369 | WP_001285572.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| FFK26_RS18740 (3868535) | 3868535..3869182 | - | 648 | WP_000094921.1 | hypothetical protein | - |
| FFK26_RS18745 (3869201) | 3869201..3869422 | - | 222 | WP_000692303.1 | DUF987 domain-containing protein | - |
| FFK26_RS18750 (3869491) | 3869491..3869967 | - | 477 | WP_001186724.1 | RadC family protein | - |
| FFK26_RS18755 (3869983) | 3869983..3870465 | - | 483 | WP_000213707.1 | antirestriction protein | - |
| FFK26_RS18760 (3870554) | 3870554..3871372 | - | 819 | WP_001234691.1 | DUF932 domain-containing protein | - |
| FFK26_RS18765 (3871472) | 3871472..3871705 | - | 234 | WP_024210659.1 | DUF905 family protein | - |
| FFK26_RS18770 (3871784) | 3871784..3872239 | - | 456 | WP_000581504.1 | IrmA family protein | - |
| FFK26_RS18775 (3872315) | 3872315..3874831 | - | 2517 | WP_001348608.1 | hypothetical protein | - |
| FFK26_RS18780 (3874952) | 3874952..3878071 | - | 3120 | WP_137564264.1 | autotransporter adhesin Ag43 | - |
| FFK26_RS18785 (3878399) | 3878399..3879271 | - | 873 | WP_001069723.1 | GTPase family protein | - |
| FFK26_RS18790 (3879443) | 3879443..3881704 | + | 2262 | WP_231201151.1 | DNA methyltransferase | - |
| FFK26_RS18795 (3881701) | 3881701..3884274 | + | 2574 | WP_000673261.1 | DEAD/DEAH box helicase family protein | - |
| FFK26_RS18800 (3884587) | 3884587..3885381 | + | 795 | WP_223277103.1 | BRO family protein | - |
| FFK26_RS18805 (3885723) | 3885723..3886040 | + | 318 | WP_000165753.1 | hypothetical protein | - |
| FFK26_RS18810 (3886160) | 3886160..3887773 | - | 1614 | WP_000080191.1 | IS66 family transposase ISEc23 | Transposase |
| FFK26_RS18815 (3887804) | 3887804..3888154 | - | 351 | WP_000624720.1 | IS66 family transposase ISEc23 | Transposase |
| FFK26_RS18820 (3888151) | 3888151..3888576 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| FFK26_RS18825 (3888805) | 3888805..3888981 | - | 177 | WP_170995989.1 | hypothetical protein | - |
| FFK26_RS18830 (3889187) | 3889187..3889597 | - | 411 | WP_024209848.1 | immunity 63 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|