MGE detailed information
MGE type: IScluster/Tn MGE length: 19703 bp
Accession: NZ_AP024089 Location: 268332..288034 Organism: Vibrio nigripulchritudo strain TUMSAT-TG-2018 Replicon: plasmid pVNTG1
Accession: NZ_AP024089 Location: 268332..288034 Organism: Vibrio nigripulchritudo strain TUMSAT-TG-2018 Replicon: plasmid pVNTG1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VNTUMSATTG_RS29590 () | 263614..265260 | + | 1647 | WP_200769022.1 | SEC-C domain-containing protein | - |
| VNTUMSATTG_RS29595 () | 265564..265947 | + | 384 | WP_200768846.1 | hypothetical protein | - |
| VNTUMSATTG_RS29600 () | 266067..266567 | + | 501 | WP_200768847.1 | hypothetical protein | - |
| VNTUMSATTG_RS29605 () | 266699..268027 | - | 1329 | WP_200768848.1 | hypothetical protein | - |
| VNTUMSATTG_RS29610 () | 268332..269494 | + | 1163 | WP_200768849.1 | IS3 family transposase ISAs33 | Transposase |
| VNTUMSATTG_RS29615 () | 269517..270923 | - | 1407 | WP_200768850.1 | Serine/threonine-protein kinase toxin HipA | VF |
| VNTUMSATTG_RS29620 () | 270916..271251 | - | 336 | WP_200768851.1 | helix-turn-helix domain-containing protein | - |
| VNTUMSATTG_RS29625 () | 271485..271671 | + | 187 | Protein_246 | DUF2384 domain-containing protein | - |
| VNTUMSATTG_RS29630 () | 271741..271923 | - | 183 | WP_200768852.1 | IS3 family transposase ISAs33 | Transposase |
| VNTUMSATTG_RS29635 () | 271942..272538 | - | 597 | WP_200769023.1 | IS3 family transposase ISAs33 | Transposase |
| VNTUMSATTG_RS29640 () | 272863..274437 | - | 1575 | WP_200768853.1 | phosphodiester glycosidase family protein | - |
| VNTUMSATTG_RS29645 () | 274642..274984 | - | 343 | Protein_250 | transposase | - |
| VNTUMSATTG_RS29650 () | 275056..276082 | - | 1027 | Protein_251 | transposase | - |
| VNTUMSATTG_RS29655 () | 276217..276903 | + | 687 | Protein_252 | IS3 family transposase ISVpa2 | Transposase |
| VNTUMSATTG_RS29660 () | 277101..277364 | - | 264 | WP_200768854.1 | IS481 family transposase ISVch1 | Transposase |
| VNTUMSATTG_RS29665 () | 277375..277641 | - | 267 | WP_200768855.1 | helix-turn-helix domain-containing protein | - |
| VNTUMSATTG_RS29670 () | 277742..279691 | - | 1950 | WP_200768856.1 | DEAD/DEAH box helicase | - |
| VNTUMSATTG_RS29675 () | 279694..281421 | - | 1728 | WP_200768857.1 | AAA family ATPase | - |
| VNTUMSATTG_RS29680 () | 282228..283243 | + | 1016 | Protein_257 | IS3 family transposase ISVisp4 | Transposase |
| VNTUMSATTG_RS29685 () | 283238..283810 | - | 573 | Protein_258 | ATP-dependent helicase | - |
| VNTUMSATTG_RS29690 () | 283861..284136 | - | 276 | WP_200768858.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VNTUMSATTG_RS29695 () | 284136..284396 | - | 261 | WP_200768859.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| VNTUMSATTG_RS29700 () | 284601..285137 | + | 537 | WP_200768860.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| VNTUMSATTG_RS29705 () | 285158..288034 | + | 2877 | Protein_262 | Tn3 family transposase | - |
| VNTUMSATTG_RS29710 () | 288425..288946 | - | 522 | WP_200768861.1 | AraC family transcriptional regulator | - |
| VNTUMSATTG_RS29715 () | 289536..291560 | + | 2025 | WP_200768862.1 | TonB-dependent receptor | - |
| VNTUMSATTG_RS29720 () | 291572..292600 | + | 1029 | WP_200768863.1 | class I SAM-dependent methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|