MGE detailed information
MGE type: Genomic_island MGE length: 35288 bp
Accession: NZ_AP023348 Location: 5221794..5257081 Organism: Pseudomonas sp. RtIB026 Replicon: chromosome
Accession: NZ_AP023348 Location: 5221794..5257081 Organism: Pseudomonas sp. RtIB026 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PRtIB026_RS23465 () | 5218104..5220506 | - | 2403 | WP_203648009.1 | DUF3772 domain-containing protein | - |
| PRtIB026_RS23470 () | 5220561..5221619 | - | 1059 | WP_203648010.1 | bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada | - |
| PRtIB026_RS23475 () | 5221794..5222420 | - | 627 | WP_203648011.1 | DNA-3-methyladenine glycosylase | - |
| PRtIB026_RS23480 () | 5222589..5223104 | + | 516 | WP_186735844.1 | putative RNA polymerase sigma factor FecI | VF |
| PRtIB026_RS23485 () | 5223097..5224047 | + | 951 | WP_203648012.1 | DUF4880 domain-containing protein | - |
| PRtIB026_RS23490 () | 5224143..5226617 | + | 2475 | WP_203648013.1 | Ferripyoverdine receptor | VF |
| PRtIB026_RS23495 () | 5226655..5228958 | - | 2304 | WP_203648014.1 | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase | - |
| PRtIB026_RS23500 () | 5229310..5230791 | + | 1482 | WP_203648015.1 | methylenetetrahydrofolate reductase C-terminal domain-containing protein | - |
| PRtIB026_RS23505 () | 5231229..5231636 | + | 408 | WP_203652708.1 | DUF2846 domain-containing protein | - |
| PRtIB026_RS23510 () | 5231739..5231978 | + | 240 | WP_203648016.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| PRtIB026_RS23515 () | 5231968..5232081 | + | 114 | WP_203648017.1 | stability protein StbE | Toxin Detail |
| PRtIB026_RS23520 () | 5232044..5234401 | - | 2358 | WP_203648018.1 | transporter substrate-binding domain-containing protein | - |
| PRtIB026_RS23525 () | 5234401..5235093 | - | 693 | WP_203652709.1 | Transcriptional regulatory protein UhpA | VF |
| PRtIB026_RS23530 () | 5235319..5236764 | - | 1446 | WP_203648019.1 | Autotransporter adhesin SadA | VF |
| PRtIB026_RS23535 () | 5237268..5238040 | - | 773 | Protein_4616 | carbon-nitrogen hydrolase family protein | - |
| PRtIB026_RS23540 () | 5238237..5239277 | + | 1041 | WP_203648020.1 | DMT family transporter | - |
| PRtIB026_RS23545 () | 5239438..5240457 | + | 1020 | WP_203648021.1 | hypothetical protein | - |
| PRtIB026_RS23550 () | 5240436..5241215 | + | 780 | WP_203648022.1 | hypothetical protein | - |
| PRtIB026_RS23555 () | 5241333..5242115 | + | 783 | WP_203648023.1 | hypothetical protein | - |
| PRtIB026_RS23560 () | 5242109..5242357 | + | 249 | Protein_4621 | hypothetical protein | - |
| PRtIB026_RS23565 () | 5242476..5242829 | + | 354 | WP_203652727.1 | hypothetical protein | - |
| PRtIB026_RS23570 () | 5242871..5243935 | - | 1065 | WP_203648024.1 | hypothetical protein | - |
| PRtIB026_RS23575 () | 5244214..5244810 | + | 597 | WP_203648025.1 | hypothetical protein | - |
| PRtIB026_RS23580 () | 5244939..5245952 | - | 1014 | WP_203648026.1 | alpha/beta hydrolase | - |
| PRtIB026_RS23585 () | 5245985..5246404 | - | 420 | WP_203648027.1 | organic hydroperoxide resistance protein | - |
| PRtIB026_RS23590 () | 5246562..5246945 | - | 384 | WP_203648028.1 | HTH-type transcriptional activator RhaR | VF |
| PRtIB026_RS23595 () | 5247109..5247792 | - | 684 | WP_028689876.1 | hydrolase | - |
| PRtIB026_RS23600 () | 5248052..5248513 | + | 462 | WP_062575164.1 | hypothetical protein | - |
| PRtIB026_RS23605 () | 5248556..5249500 | - | 945 | Protein_4630 | LysR family transcriptional regulator | - |
| PRtIB026_RS23610 () | 5249662..5249892 | - | 231 | WP_186594201.1 | hypothetical protein | - |
| PRtIB026_RS23615 () | 5250914..5251132 | + | 219 | WP_203648029.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| PRtIB026_RS23620 () | 5251160..5251475 | + | 316 | Protein_4633 | IS3 family transposase | - |
| PRtIB026_RS23625 () | 5251812..5252084 | + | 273 | WP_203648030.1 | hypothetical protein | - |
| PRtIB026_RS23630 () | 5252326..5252898 | + | 573 | WP_203648031.1 | hypothetical protein | - |
| PRtIB026_RS23635 () | 5253498..5256014 | - | 2517 | WP_203648032.1 | S8 family peptidase | - |
| PRtIB026_RS23640 () | 5256056..5257081 | - | 1026 | WP_203648033.1 | ATP-binding protein | - |
| PRtIB026_RS23650 () | 5257532..5257942 | - | 411 | WP_062575174.1 | pilin | - |
| PRtIB026_RS23655 () | 5258169..5259377 | + | 1209 | WP_203648034.1 | type II secretion system F family protein | - |
| PRtIB026_RS23660 () | 5259380..5260246 | + | 867 | WP_203648035.1 | A24 family peptidase | - |
| PRtIB026_RS23665 () | 5260246..5260869 | + | 624 | WP_028689885.1 | dephospho-CoA kinase | - |
| PRtIB026_RS23670 () | 5260866..5261064 | + | 199 | Protein_4642 | DNA gyrase inhibitor YacG | - |
| PRtIB026_RS23675 () | 5261215..5261922 | - | 708 | WP_203648036.1 | energy-coupling factor ABC transporter permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|