MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_AP023315 Location: 995896..1006322 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4614 Replicon: chromosome
Accession: NZ_AP023315 Location: 995896..1006322 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4614 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5684_RS04725 (991009) | 991009..991389 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| K5684_RS04730 (991445) | 991445..994012 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| K5684_RS04735 (994171) | 994171..994692 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| K5684_RS04740 (994864) | 994864..995520 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| K5684_RS04745 (995867) | 995867..996072 | + | 206 | Protein_931 | IS5 family transposase ISEcl3 | Transposase |
| K5684_RS04750 (996145) | 996145..996672 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| K5684_RS04755 (996669) | 996669..996959 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| K5684_RS04760 (997229) | 997229..997407 | - | 179 | Protein_934 | IS3 family transposase | - |
| K5684_RS04765 (997648) | 997648..997974 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| K5684_RS04770 (998247) | 998247..998594 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| K5684_RS04775 (998579) | 998579..999028 | - | 450 | WP_000381610.1 | membrane protein | - |
| K5684_RS04780 (999459) | 999459..999902 | - | 444 | WP_000715092.1 | hypothetical protein | VF |
| K5684_RS04785 (1000359) | 1000359..1001009 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| K5684_RS04790 (1001006) | 1001006..1002694 | + | 1689 | WP_000848113.1 | Protein InvG | VF |
| K5684_RS04795 (1002691) | 1002691..1003809 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| K5684_RS04800 (1003834) | 1003834..1005891 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| K5684_RS04805 (1005915) | 1005915..1006322 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| K5684_RS04810 (1006319) | 1006319..1007614 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| K5684_RS04815 (1007592) | 1007592..1008035 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| K5684_RS04820 (1008035) | 1008035..1009045 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| K5684_RS04825 (1009045) | 1009045..1009956 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| K5684_RS04830 (1009946) | 1009946..1010620 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| K5684_RS04835 (1010646) | 1010646..1010906 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |