MGE detailed information
MGE type: Genomic_island MGE length: 11459 bp
Accession: NZ_AP023311 Location: 994884..1006342 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4596 Replicon: chromosome
Accession: NZ_AP023311 Location: 994884..1006342 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4596 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5674_RS04725 (991029) | 991029..991409 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| K5674_RS04730 (991465) | 991465..994032 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| K5674_RS04735 (994191) | 994191..994712 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| K5674_RS04740 (994884) | 994884..995540 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| K5674_RS04745 (995887) | 995887..996092 | + | 206 | Protein_931 | IS5 family transposase ISEcl3 | Transposase |
| K5674_RS04750 (996165) | 996165..996692 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| K5674_RS04755 (996689) | 996689..996979 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| K5674_RS04760 (997249) | 997249..997427 | - | 179 | Protein_934 | IS3 family transposase | - |
| K5674_RS04765 (997668) | 997668..997994 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| K5674_RS04770 (998267) | 998267..998614 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| K5674_RS04775 (998599) | 998599..999048 | - | 450 | WP_000381610.1 | membrane protein | - |
| K5674_RS04780 (999479) | 999479..999922 | - | 444 | WP_000715092.1 | HTH-type transcriptional regulator IscR | VF |
| K5674_RS04785 (1000379) | 1000379..1001029 | + | 651 | WP_001674874.1 | Cysteine desulfurase IscS | VF |
| K5674_RS04790 (1001026) | 1001026..1002714 | + | 1689 | WP_000848113.1 | hypothetical protein | VF |
| K5674_RS04795 (1002711) | 1002711..1003829 | + | 1119 | WP_000612171.1 | Iron-binding protein IscA | VF |
| K5674_RS04800 (1003854) | 1003854..1005911 | + | 2058 | WP_000927219.1 | Co-chaperone protein HscB | VF |
| K5674_RS04805 (1005935) | 1005935..1006342 | + | 408 | WP_001164066.1 | hypothetical protein | VF |
| K5674_RS04810 (1006339) | 1006339..1007634 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| K5674_RS04815 (1007612) | 1007612..1008055 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| K5674_RS04820 (1008055) | 1008055..1009065 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| K5674_RS04825 (1009065) | 1009065..1009976 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| K5674_RS04830 (1009966) | 1009966..1010640 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| K5674_RS04835 (1010666) | 1010666..1010926 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0.003 |