MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_AP023304 Location: 1029229..1039655 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4551 Replicon: chromosome
Accession: NZ_AP023304 Location: 1029229..1039655 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4551 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5676_RS04925 (1024342) | 1024342..1024722 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| K5676_RS04930 (1024778) | 1024778..1027345 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| K5676_RS04935 (1027504) | 1027504..1028025 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| K5676_RS04940 (1028197) | 1028197..1028853 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| K5676_RS04945 (1029200) | 1029200..1029405 | + | 206 | Protein_971 | IS5 family transposase ISEcl3 | Transposase |
| K5676_RS04950 (1029478) | 1029478..1030005 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| K5676_RS04955 (1030002) | 1030002..1030292 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| K5676_RS04960 (1030562) | 1030562..1030740 | - | 179 | Protein_974 | IS3 family transposase | - |
| K5676_RS04965 (1030981) | 1030981..1031307 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| K5676_RS04970 (1031580) | 1031580..1031927 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| K5676_RS04975 (1031912) | 1031912..1032361 | - | 450 | WP_000381610.1 | membrane protein | - |
| K5676_RS04980 (1032792) | 1032792..1033235 | - | 444 | WP_000715092.1 | hypothetical protein | VF |
| K5676_RS04985 (1033692) | 1033692..1034342 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| K5676_RS04990 (1034339) | 1034339..1036027 | + | 1689 | WP_000848113.1 | Protein InvG | VF |
| K5676_RS04995 (1036024) | 1036024..1037142 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| K5676_RS05000 (1037167) | 1037167..1039224 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| K5676_RS05005 (1039248) | 1039248..1039655 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| K5676_RS05010 (1039652) | 1039652..1040947 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| K5676_RS05015 (1040925) | 1040925..1041368 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| K5676_RS05020 (1041368) | 1041368..1042378 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| K5676_RS05025 (1042378) | 1042378..1043289 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| K5676_RS05030 (1043279) | 1043279..1043953 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| K5676_RS05035 (1043979) | 1043979..1044239 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |