MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 86244 bp
Accession: NZ_AP023303 Location: 1944563..2030806 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4526 Replicon: chromosome
Accession: NZ_AP023303 Location: 1944563..2030806 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4526 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5618_RS09325 () | 1940560..1940838 | - | 279 | Protein_1832 | transposase | - |
| K5618_RS09330 () | 1940924..1941391 | - | 468 | Protein_1833 | integrase domain-containing protein | - |
| K5618_RS24605 () | 1941634..1941768 | + | 135 | WP_001524547.1 | hypothetical protein | - |
| K5618_RS09335 () | 1941866..1942339 | - | 474 | WP_001219015.1 | peptidase | - |
| K5618_RS09345 () | 1943000..1943305 | - | 306 | Protein_1836 | Arm DNA-binding domain-containing protein | - |
| K5618_RS09355 () | 1943649..1944446 | - | 798 | WP_000598920.1 | DgsA anti-repressor MtfA | - |
| K5618_RS09365 () | 1944738..1945727 | - | 990 | WP_000532847.1 | tyrosine-type recombinase/integrase | - |
| K5618_RS09370 () | 1945729..1945956 | - | 228 | WP_001527041.1 | DUF4224 domain-containing protein | - |
| K5618_RS09375 () | 1945996..1946565 | - | 570 | WP_001061334.1 | 3'-5' exonuclease | - |
| K5618_RS09380 () | 1946569..1947150 | - | 582 | WP_020899398.1 | hypothetical protein | - |
| K5618_RS09385 () | 1947161..1947418 | - | 258 | WP_000224241.1 | hypothetical protein | - |
| K5618_RS09390 () | 1947420..1947953 | - | 534 | WP_000215886.1 | hypothetical protein | - |
| K5618_RS09395 () | 1948024..1948563 | - | 540 | WP_000008351.1 | hypothetical protein | - |
| K5618_RS09400 () | 1948700..1949527 | - | 828 | WP_000080416.1 | DUF2303 family protein | - |
| K5618_RS09405 () | 1949585..1949956 | - | 372 | WP_000997191.1 | hypothetical protein | - |
| K5618_RS24610 () | 1950180..1950299 | - | 120 | Protein_1847 | hypothetical protein | - |
| K5618_RS09410 () | 1950496..1950720 | + | 225 | WP_023891434.1 | hypothetical protein | - |
| K5618_RS09415 () | 1950683..1951021 | - | 339 | WP_001067432.1 | ClpX C4-type zinc finger protein | - |
| K5618_RS09420 () | 1951227..1951922 | - | 696 | WP_001020636.1 | helix-turn-helix transcriptional regulator | - |
| K5618_RS09425 () | 1952020..1952244 | + | 225 | WP_001191666.1 | helix-turn-helix transcriptional regulator | - |
| K5618_RS09430 () | 1952273..1952827 | + | 555 | WP_000509731.1 | YmfL family putative regulatory protein | - |
| K5618_RS24615 () | 1952967..1953146 | + | 180 | WP_001664303.1 | DUF4222 domain-containing protein | - |
| K5618_RS09435 () | 1953076..1953966 | + | 891 | WP_223168167.1 | Rha family phage regulatory protein | - |
| K5618_RS09440 () | 1953963..1954187 | + | 225 | WP_000620702.1 | hypothetical protein | - |
| K5618_RS09445 () | 1954184..1954780 | + | 597 | WP_259663024.1 | hypothetical protein | - |
| K5618_RS09450 () | 1954726..1955430 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| K5618_RS09455 () | 1955496..1955810 | + | 315 | Protein_1858 | recombinase family protein | - |
| K5618_RS09460 () | 1956129..1956785 | - | 657 | WP_001516695.1 | quinolone resistance pentapeptide repeat protein QnrS1 | - |
| K5618_RS09465 () | 1957180..1958195 | + | 1016 | Protein_1860 | IS3 family transposase | - |
| K5618_RS09470 () | 1958238..1961021 | - | 2784 | Protein_1861 | Tn3-like element Tn3 family transposase | - |
| K5618_RS09475 () | 1961047..1961379 | + | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| K5618_RS09480 () | 1961426..1962301 | - | 876 | WP_015387340.1 | extended-spectrum class A beta-lactamase CTX-M-55 | - |
| K5618_RS09485 () | 1962557..1962844 | - | 288 | Protein_1864 | transposase | - |
| K5618_RS09490 () | 1962899..1963603 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| K5618_RS09495 () | 1963699..1964340 | + | 642 | WP_001011939.1 | type A-2 chloramphenicol O-acetyltransferase CatII | - |
| K5618_RS09500 () | 1964484..1965188 | - | 705 | WP_127762863.1 | IS6-like element IS26 family transposase | - |
| K5618_RS09505 () | 1965254..1966768 | + | 1515 | Protein_1868 | Tn3-like element TnAs1 family transposase | - |
| K5618_RS09510 () | 1966837..1967721 | + | 885 | WP_001345827.1 | hypothetical protein | - |
| K5618_RS09515 () | 1967717..1967886 | + | 170 | Protein_1870 | resolvase | - |
| K5618_RS09520 () | 1967893..1968060 | - | 168 | WP_001430249.1 | hypothetical protein | - |
| K5618_RS09525 () | 1968232..1970907 | - | 2676 | WP_015059139.1 | hypothetical protein | - |
| K5618_RS09530 () | 1971210..1972211 | + | 1002 | WP_000138753.1 | DUF4238 domain-containing protein | - |
| K5618_RS09535 () | 1972436..1972846 | - | 411 | WP_001430251.1 | hypothetical protein | - |
| K5618_RS09540 () | 1973007..1973357 | - | 351 | WP_001430247.1 | plasmid partitioning/stability family protein | - |
| K5618_RS09545 () | 1973360..1974322 | - | 963 | WP_000959875.1 | plasmid segregation protein ParM | - |
| K5618_RS09550 () | 1974454..1974762 | + | 309 | WP_039021875.1 | hypothetical protein | - |
| K5618_RS09555 () | 1974839..1975522 | + | 684 | WP_000085889.1 | DNA methylase | - |
| K5618_RS09560 () | 1975523..1975744 | + | 222 | WP_001104902.1 | hypothetical protein | - |
| K5618_RS09565 () | 1975638..1976191 | + | 554 | Protein_1880 | DUF1380 domain-containing protein | - |
| K5618_RS09570 () | 1976236..1977006 | + | 771 | WP_001006207.1 | hypothetical protein | - |
| K5618_RS09575 () | 1977366..1977791 | + | 426 | WP_001470882.1 | antirestriction protein | - |
| K5618_RS09580 () | 1977838..1978260 | + | 423 | WP_000271684.1 | DUF1380 family protein | - |
| K5618_RS09585 () | 1978257..1978448 | + | 192 | WP_039021874.1 | hypothetical protein | - |
| K5618_RS09590 () | 1979483..1979713 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| K5618_RS09595 () | 1979765..1981126 | + | 1362 | WP_000170715.1 | DUF3560 domain-containing protein | - |
| K5618_RS09600 () | 1981174..1981737 | + | 564 | WP_001315564.1 | class I SAM-dependent methyltransferase | - |
| K5618_RS09605 () | 1981763..1981990 | + | 228 | WP_001825119.1 | hypothetical protein | - |
| K5618_RS24620 () | 1981888..1982160 | + | 273 | WP_072118979.1 | hypothetical protein | - |
| K5618_RS09610 () | 1982401..1982607 | + | 207 | WP_000275858.1 | hypothetical protein | - |
| K5618_RS09615 () | 1982633..1983172 | + | 540 | WP_001825195.1 | single-stranded DNA-binding protein | - |
| K5618_RS09620 () | 1983235..1983468 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| K5618_RS09625 () | 1983534..1985492 | + | 1959 | WP_065800285.1 | ParB/RepB/Spo0J family partition protein | - |
| K5618_RS09630 () | 1985547..1985981 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| K5618_RS09635 () | 1985978..1986697 | + | 720 | WP_013362833.1 | plasmid SOS inhibition protein A | - |
| - () | 1986709..1986933 | + | 225 | NuclAT_0 | - | - |
| - () | 1986709..1986933 | + | 225 | NuclAT_0 | - | - |
| - () | 1986709..1986933 | + | 225 | NuclAT_0 | - | - |
| - () | 1986709..1986933 | + | 225 | NuclAT_0 | - | - |
| - | 1986866..1986931 | + | 66 | - | - | Antitoxin Detail |
| K5618_RS24625 () | 1986919..1987068 | + | 150 | Protein_1896 | plasmid maintenance protein Mok | - |
| K5618_RS09640 () | 1987010..1987135 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| K5618_RS24630 () | 1987355..1987585 | + | 231 | WP_001426396.1 | hypothetical protein | - |
| K5618_RS24635 () | 1987583..1987756 | - | 174 | Protein_1899 | hypothetical protein | - |
| K5618_RS24640 () | 1987826..1988032 | + | 207 | WP_000547968.1 | hypothetical protein | - |
| K5618_RS09645 () | 1988057..1988344 | + | 288 | WP_000107544.1 | hypothetical protein | - |
| K5618_RS09650 () | 1988462..1989283 | + | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| K5618_RS09655 () | 1989580..1990227 | - | 648 | WP_031943493.1 | transglycosylase SLT domain-containing protein | - |
| K5618_RS09660 () | 1990504..1990887 | + | 384 | WP_000124981.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| K5618_RS09665 () | 1991078..1991764 | + | 687 | WP_000332484.1 | PAS domain-containing protein | - |
| K5618_RS09670 () | 1991858..1992085 | + | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| K5618_RS09675 () | 1992119..1992478 | + | 360 | WP_000340272.1 | type IV conjugative transfer system pilin TraA | - |
| K5618_RS09680 () | 1992493..1992804 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| K5618_RS09685 () | 1992826..1993392 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| K5618_RS09690 () | 1993379..1994107 | + | 729 | WP_001230813.1 | type-F conjugative transfer system secretin TraK | - |
| K5618_RS09695 () | 1994107..1995534 | + | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| K5618_RS09700 () | 1995524..1996114 | + | 591 | WP_000002787.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| K5618_RS09705 () | 1996101..1996421 | + | 321 | WP_001057287.1 | conjugal transfer protein TrbD | - |
| K5618_RS09710 () | 1996414..1996665 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| K5618_RS09715 () | 1996662..1997177 | + | 516 | WP_015059130.1 | type IV conjugative transfer system lipoprotein TraV | - |
| K5618_RS09720 () | 1997312..1997533 | + | 222 | WP_001278695.1 | conjugal transfer protein TraR | - |
| K5618_RS09725 () | 1997526..1998002 | + | 477 | WP_015059129.1 | hypothetical protein | - |
| K5618_RS09730 () | 1998082..1998296 | + | 215 | Protein_1918 | hypothetical protein | - |
| K5618_RS09735 () | 1998324..1998686 | + | 363 | WP_000836675.1 | hypothetical protein | - |
| K5618_RS09740 () | 1998812..2001442 | + | 2631 | WP_000069764.1 | type IV secretion system protein TraC | - |
| K5618_RS09745 () | 2001439..2001825 | + | 387 | WP_000214092.1 | type-F conjugative transfer system protein TrbI | - |
| K5618_RS09750 () | 2001822..2002454 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| K5618_RS09755 () | 2002451..2003443 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| K5618_RS09760 () | 2003452..2004090 | + | 639 | WP_000777692.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| K5618_RS09765 () | 2004087..2005895 | + | 1809 | WP_000821821.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| K5618_RS09770 () | 2005922..2006179 | + | 258 | WP_000864352.1 | conjugal transfer protein TrbE | - |
| K5618_RS09775 () | 2006172..2006915 | + | 744 | WP_001430248.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| K5618_RS09780 () | 2006931..2007278 | + | 348 | WP_001287891.1 | conjugal transfer protein TrbA | - |
| K5618_RS09785 () | 2007397..2007681 | + | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| K5618_RS09790 () | 2007668..2008213 | + | 546 | WP_000059821.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| K5618_RS09795 () | 2008143..2008505 | + | 363 | WP_010379880.1 | P-type conjugative transfer protein TrbJ | - |
| K5618_RS09800 () | 2008502..2009878 | + | 1377 | WP_029400169.1 | conjugal transfer pilus assembly protein TraH | - |
| K5618_RS09805 () | 2009875..2012700 | + | 2826 | WP_001007045.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| K5618_RS09810 () | 2012697..2013206 | + | 510 | WP_031943494.1 | conjugal transfer entry exclusion protein TraS | - |
| K5618_RS09815 () | 2013220..2013951 | + | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| K5618_RS09820 () | 2014204..2016420 | + | 2217 | WP_022630316.1 | type IV conjugative transfer system coupling protein TraD | - |
| K5618_RS09825 () | 2016420..2021690 | + | 5271 | WP_015059123.1 | conjugative transfer relaxase/helicase TraI | - |
| K5618_RS09830 () | 2021710..2022456 | + | 747 | WP_015059122.1 | conjugal transfer pilus acetylase TraX | - |
| K5618_RS09835 () | 2022511..2023071 | + | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| K5618_RS24645 () | 2023202..2023415 | + | 214 | Protein_1940 | ANR family transcriptional regulator | - |
| K5618_RS09840 () | 2023701..2024378 | + | 678 | WP_000392235.1 | PIN domain-containing protein | - |
| K5618_RS09845 () | 2025032..2025244 | + | 213 | Protein_1942 | ANR family transcriptional regulator | - |
| K5618_RS09850 () | 2025488..2025949 | + | 462 | WP_015059120.1 | thermonuclease family protein | - |
| K5618_RS09855 () | 2025995..2026204 | + | 210 | WP_001333231.1 | hemolysin expression modulator Hha | - |
| K5618_RS09860 () | 2026242..2026832 | + | 591 | WP_000766816.1 | DUF2726 domain-containing protein | - |
| K5618_RS09865 () | 2027072..2027326 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| K5618_RS09870 () | 2027564..2027638 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| K5618_RS09875 () | 2027631..2028539 | + | 909 | WP_161508035.1 | incFII family plasmid replication initiator RepA | - |
| K5618_RS09880 () | 2028551..2029255 | + | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| K5618_RS09885 () | 2029340..2029753 | - | 414 | WP_000842532.1 | hypothetical protein | - |
| K5618_RS09890 () | 2029750..2029962 | - | 213 | WP_001093793.1 | hypothetical protein | - |
| K5618_RS09895 () | 2030294..2030437 | + | 144 | Protein_1952 | tail fiber assembly protein | - |
| K5618_RS09900 () | 2031156..2031317 | + | 162 | WP_000500831.1 | hypothetical protein | - |
| K5618_RS09905 () | 2031444..2031863 | + | 420 | WP_000394196.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| K5618_RS09910 () | 2031866..2033134 | + | 1269 | WP_000457662.1 | Y-family DNA polymerase | - |
| K5618_RS09915 () | 2033589..2033801 | + | 213 | WP_000208509.1 | cold-shock protein | - |
| K5618_RS09920 () | 2033812..2034000 | + | 189 | WP_024131109.1 | hypothetical protein | - |
| K5618_RS09925 () | 2034261..2035457 | - | 1197 | WP_001080680.1 | porin OmpS1 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|