MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_AP023299 Location: 995928..1006354 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4334 Replicon: chromosome
Accession: NZ_AP023299 Location: 995928..1006354 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4334 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5616_RS04725 (991041) | 991041..991421 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| K5616_RS04730 (991477) | 991477..994044 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| K5616_RS04735 (994203) | 994203..994724 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| K5616_RS04740 (994896) | 994896..995552 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| K5616_RS04745 (995899) | 995899..996104 | + | 206 | Protein_931 | IS5 family transposase ISEcl3 | Transposase |
| K5616_RS04750 (996177) | 996177..996704 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| K5616_RS04755 (996701) | 996701..996991 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| K5616_RS04760 (997261) | 997261..997439 | - | 179 | Protein_934 | IS3 family transposase | - |
| K5616_RS04765 (997680) | 997680..998006 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| K5616_RS04770 (998279) | 998279..998626 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| K5616_RS04775 (998611) | 998611..999060 | - | 450 | WP_000381610.1 | membrane protein | - |
| K5616_RS04780 (999491) | 999491..999934 | - | 444 | WP_000715092.1 | Acetylornithine deacetylase | VF |
| K5616_RS04785 (1000391) | 1000391..1001041 | + | 651 | WP_001674874.1 | Diaminopropionate ammonia-lyase | VF |
| K5616_RS04790 (1001038) | 1001038..1002726 | + | 1689 | WP_000848113.1 | Putative carbamoyltransferase YgeW | VF |
| K5616_RS04795 (1002723) | 1002723..1003841 | + | 1119 | WP_000612171.1 | Limonene hydroxylase | VF |
| K5616_RS04800 (1003866) | 1003866..1005923 | + | 2058 | WP_000927219.1 | Nicotinate dehydrogenase small FeS subunit | VF |
| K5616_RS04805 (1005947) | 1005947..1006354 | + | 408 | WP_001164066.1 | Nicotinate dehydrogenase FAD-subunit | VF |
| K5616_RS04810 (1006351) | 1006351..1007646 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| K5616_RS04815 (1007624) | 1007624..1008067 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| K5616_RS04820 (1008067) | 1008067..1009077 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| K5616_RS04825 (1009077) | 1009077..1009988 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| K5616_RS04830 (1009978) | 1009978..1010652 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| K5616_RS04835 (1010678) | 1010678..1010938 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |