MGE detailed information
MGE type: Conjugative plasmid MGE length: 60222 bp
Accession: NZ_AP023295 Location: 1..60222 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4261 Replicon: plasmid L-4261 strain 4[5]12:i:-
Accession: NZ_AP023295 Location: 1..60222 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4261 Replicon: plasmid L-4261 strain 4[5]12:i:-
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5635_RS23890 (34) | 34..108 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| K5635_RS23895 (101) | 101..958 | + | 858 | WP_021579013.1 | incFII family plasmid replication initiator RepA | - |
| K5635_RS23900 (1871) | 1871..2155 | + | 285 | WP_053264211.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| K5635_RS23905 (2155) | 2155..2430 | + | 276 | WP_012000729.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| K5635_RS23910 (2584) | 2584..3588 | + | 1005 | WP_074568613.1 | hypothetical protein | - |
| K5635_RS23915 (3685) | 3685..4689 | - | 1005 | WP_244582493.1 | hypothetical protein | - |
| K5635_RS23920 (4873) | 4873..5268 | - | 396 | WP_053265925.1 | plasmid partitioning/stability family protein | - |
| K5635_RS23925 (5268) | 5268..6227 | - | 960 | WP_000921959.1 | plasmid segregation protein ParM | - |
| K5635_RS23930 (6666) | 6666..7568 | + | 903 | WP_053265924.1 | DUF1281 domain-containing protein | - |
| K5635_RS23935 (7572) | 7572..7877 | + | 306 | WP_072135136.1 | hypothetical protein | - |
| K5635_RS23940 (7954) | 7954..8637 | + | 684 | WP_021545186.1 | DNA methylase | - |
| K5635_RS23945 (8638) | 8638..8859 | + | 222 | WP_001585128.1 | hypothetical protein | - |
| K5635_RS23950 (8753) | 8753..9307 | + | 555 | WP_122991193.1 | DUF1380 family protein | - |
| K5635_RS23955 (9352) | 9352..10122 | + | 771 | WP_021579020.1 | hypothetical protein | - |
| K5635_RS23960 (10540) | 10540..10965 | + | 426 | WP_021545181.1 | antirestriction protein | - |
| K5635_RS23965 (11012) | 11012..11434 | + | 423 | WP_021545180.1 | DUF1380 family protein | - |
| K5635_RS23970 (11431) | 11431..11622 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| K5635_RS23975 (12617) | 12617..12847 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| K5635_RS23980 (12899) | 12899..14260 | + | 1362 | WP_021579022.1 | DUF3560 domain-containing protein | - |
| K5635_RS23985 (14307) | 14307..14870 | + | 564 | WP_021545178.1 | class I SAM-dependent methyltransferase | - |
| K5635_RS23990 (14956) | 14956..15423 | - | 468 | WP_097418494.1 | hypothetical protein | - |
| K5635_RS23995 (15725) | 15725..16264 | + | 540 | WP_009426937.1 | single-stranded DNA-binding protein | - |
| K5635_RS24000 (16322) | 16322..16555 | + | 234 | WP_021545209.1 | DUF905 family protein | - |
| K5635_RS24005 (16619) | 16619..18577 | + | 1959 | WP_221061096.1 | ParB/RepB/Spo0J family partition protein | - |
| K5635_RS24010 (18632) | 18632..19066 | + | 435 | WP_000845926.1 | conjugation system SOS inhibitor PsiB | - |
| K5635_RS24015 (19063) | 19063..19782 | + | 720 | WP_021545207.1 | plasmid SOS inhibition protein A | - |
| K5635_RS24020 (19779) | 19779..20093 | + | 315 | WP_000872077.1 | hypothetical protein | - |
| - (20042) | 20042..20235 | + | 194 | NuclAT_0 | - | - |
| - (20042) | 20042..20235 | + | 194 | NuclAT_0 | - | - |
| - (20042) | 20042..20235 | + | 194 | NuclAT_0 | - | - |
| - (20042) | 20042..20235 | + | 194 | NuclAT_0 | - | - |
| - (20045) | 20045..20235 | - | 191 | NuclAT_0 | - | - |
| K5635_RS24510 (20243) | 20243..20395 | + | 153 | Protein_27 | FlmC family protein | - |
| K5635_RS24025 (20340) | 20340..20462 | + | 123 | WP_223170659.1 | type I toxin-antitoxin system Hok family toxin | - |
| K5635_RS24515 (20762) | 20762..21059 | - | 298 | Protein_29 | hypothetical protein | - |
| K5635_RS24035 (21360) | 21360..21647 | + | 288 | WP_221061097.1 | hypothetical protein | - |
| K5635_RS24040 (21766) | 21766..22587 | + | 822 | WP_021545205.1 | DUF932 domain-containing protein | - |
| K5635_RS24045 (22883) | 22883..23473 | - | 591 | WP_171729014.1 | hypothetical protein | VF |
| K5635_RS24050 (23806) | 23806..24189 | + | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| K5635_RS24055 (24376) | 24376..25065 | + | 690 | WP_000283380.1 | conjugal transfer transcriptional regulator TraJ | - |
| K5635_RS24060 (25158) | 25158..25559 | + | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| K5635_RS24065 (25592) | 25592..25951 | + | 360 | WP_000994781.1 | type IV conjugative transfer system pilin TraA | - |
| K5635_RS24070 (25966) | 25966..26277 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| K5635_RS24075 (26299) | 26299..26865 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| K5635_RS24080 (26852) | 26852..27580 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| K5635_RS24085 (27580) | 27580..29007 | + | 1428 | WP_021545202.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| K5635_RS24090 (28997) | 28997..29581 | + | 585 | WP_021545201.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| K5635_RS24095 (29568) | 29568..29888 | + | 321 | WP_021545200.1 | conjugal transfer protein TrbD | - |
| K5635_RS24100 (29881) | 29881..30132 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| K5635_RS24105 (30129) | 30129..30644 | + | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| K5635_RS24110 (30779) | 30779..31000 | + | 222 | WP_072113546.1 | conjugal transfer protein TraR | - |
| K5635_RS24115 (31393) | 31393..34023 | + | 2631 | WP_021545198.1 | type IV secretion system protein TraC | - |
| K5635_RS24120 (34020) | 34020..34406 | + | 387 | WP_000214096.1 | type-F conjugative transfer system protein TrbI | - |
| K5635_RS24125 (34403) | 34403..35035 | + | 633 | WP_001203745.1 | type-F conjugative transfer system protein TraW | - |
| K5635_RS24130 (35032) | 35032..36024 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| K5635_RS24135 (36050) | 36050..36511 | + | 462 | WP_086624112.1 | hypothetical protein | - |
| K5635_RS24140 (36541) | 36541..36993 | + | 453 | WP_021545197.1 | hypothetical protein | - |
| K5635_RS24145 (37021) | 37021..37659 | + | 639 | WP_001104086.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| K5635_RS24150 (37656) | 37656..39464 | + | 1809 | WP_000821839.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| K5635_RS24155 (39491) | 39491..39751 | + | 261 | WP_137475372.1 | conjugal transfer protein TrbE | - |
| K5635_RS24160 (39744) | 39744..40487 | + | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| K5635_RS24165 (40503) | 40503..40850 | + | 348 | WP_001287902.1 | conjugal transfer protein TrbA | - |
| K5635_RS24170 (40969) | 40969..41253 | + | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| K5635_RS24175 (41240) | 41240..41785 | + | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| K5635_RS24180 (41715) | 41715..42077 | + | 363 | WP_001443292.1 | P-type conjugative transfer protein TrbJ | - |
| K5635_RS24185 (42074) | 42074..43450 | + | 1377 | WP_000982833.1 | conjugal transfer pilus assembly protein TraH | - |
| K5635_RS24190 (43447) | 43447..46272 | + | 2826 | WP_001554363.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| K5635_RS24195 (46269) | 46269..46778 | + | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| K5635_RS24200 (46792) | 46792..47523 | + | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| K5635_RS24205 (47775) | 47775..49973 | + | 2199 | WP_001496532.1 | type IV conjugative transfer system coupling protein TraD | - |
| K5635_RS24210 (49973) | 49973..55243 | + | 5271 | WP_085543300.1 | Multifunctional conjugation protein TraI | Relaxase |
| K5635_RS24215 (55263) | 55263..56009 | + | 747 | WP_000205766.1 | conjugal transfer pilus acetylase TraX | - |
| K5635_RS24220 (56068) | 56068..56928 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| K5635_RS24225 (57031) | 57031..57591 | + | 561 | WP_000840464.1 | fertility inhibition protein FinO | - |
| K5635_RS24230 (57724) | 57724..57882 | + | 159 | WP_021545194.1 | hypothetical protein | - |
| K5635_RS24235 (58181) | 58181..58648 | + | 468 | WP_221061095.1 | thermonuclease family protein | - |
| K5635_RS24240 (58694) | 58694..58903 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| K5635_RS24245 (58941) | 58941..59531 | + | 591 | WP_021545192.1 | DUF2726 domain-containing protein | - |
| K5635_RS24250 (59771) | 59771..60031 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|