MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_AP023292 Location: 995816..1006242 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4233 Replicon: chromosome
Accession: NZ_AP023292 Location: 995816..1006242 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4233 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5617_RS04720 (990929) | 990929..991309 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| K5617_RS04725 (991365) | 991365..993932 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| K5617_RS04730 (994091) | 994091..994612 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| K5617_RS04735 (994784) | 994784..995440 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| K5617_RS04740 (995787) | 995787..995992 | + | 206 | Protein_931 | IS5 family transposase ISEcl3 | Transposase |
| K5617_RS04745 (996065) | 996065..996592 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| K5617_RS04750 (996589) | 996589..996879 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| K5617_RS04755 (997149) | 997149..997327 | - | 179 | Protein_934 | IS3 family transposase | - |
| K5617_RS04760 (997568) | 997568..997894 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| K5617_RS04765 (998167) | 998167..998514 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| K5617_RS04770 (998499) | 998499..998948 | - | 450 | WP_000381610.1 | membrane protein | - |
| K5617_RS04775 (999379) | 999379..999822 | - | 444 | WP_000715092.1 | hypothetical protein | VF |
| K5617_RS04780 (1000279) | 1000279..1000929 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| K5617_RS04785 (1000926) | 1000926..1002614 | + | 1689 | WP_000848113.1 | Protein InvG | VF |
| K5617_RS04790 (1002611) | 1002611..1003729 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| K5617_RS04795 (1003754) | 1003754..1005811 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| K5617_RS04800 (1005835) | 1005835..1006242 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| K5617_RS04805 (1006239) | 1006239..1007534 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| K5617_RS04810 (1007512) | 1007512..1007955 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| K5617_RS04815 (1007955) | 1007955..1008965 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| K5617_RS04820 (1008965) | 1008965..1009876 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| K5617_RS04825 (1009866) | 1009866..1010540 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| K5617_RS04830 (1010566) | 1010566..1010826 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |