MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_AP023291 Location: 995800..1006226 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain L-4126 Replicon: chromosome
Accession: NZ_AP023291 Location: 995800..1006226 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain L-4126 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5613_RS04720 (990913) | 990913..991293 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| K5613_RS04725 (991349) | 991349..993916 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| K5613_RS04730 (994075) | 994075..994596 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| K5613_RS04735 (994768) | 994768..995424 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| K5613_RS04740 (995771) | 995771..995976 | + | 206 | Protein_931 | IS5 family transposase ISEcl3 | Transposase |
| K5613_RS04745 (996049) | 996049..996576 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| K5613_RS04750 (996573) | 996573..996863 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| K5613_RS04755 (997133) | 997133..997311 | - | 179 | Protein_934 | IS3 family transposase | - |
| K5613_RS04760 (997552) | 997552..997878 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| K5613_RS04765 (998151) | 998151..998498 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| K5613_RS04770 (998483) | 998483..998932 | - | 450 | WP_000381610.1 | membrane protein | - |
| K5613_RS04775 (999363) | 999363..999806 | - | 444 | WP_000715092.1 | hypothetical protein | VF |
| K5613_RS04780 (1000263) | 1000263..1000913 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| K5613_RS04785 (1000910) | 1000910..1002598 | + | 1689 | WP_000848113.1 | Protein InvG | VF |
| K5613_RS04790 (1002595) | 1002595..1003713 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| K5613_RS04795 (1003738) | 1003738..1005795 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| K5613_RS04800 (1005819) | 1005819..1006226 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| K5613_RS04805 (1006223) | 1006223..1007518 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| K5613_RS04810 (1007496) | 1007496..1007939 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| K5613_RS04815 (1007939) | 1007939..1008949 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| K5613_RS04820 (1008949) | 1008949..1009860 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| K5613_RS04825 (1009850) | 1009850..1010524 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| K5613_RS04830 (1010550) | 1010550..1010810 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |