MGE detailed information
MGE type: Genomic_island MGE length: 12086 bp
Accession: NZ_AP023288 Location: 2477222..2489307 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-3835 Replicon: chromosome
Accession: NZ_AP023288 Location: 2477222..2489307 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-3835 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5610_RS12180 (2473143) | 2473143..2474345 | - | 1203 | WP_000347159.1 | MalY/PatB family protein | - |
| K5610_RS12185 (2474358) | 2474358..2475809 | - | 1452 | WP_001276616.1 | Na+/H+ antiporter NhaC | - |
| K5610_RS12190 (2475953) | 2475953..2476960 | - | 1008 | WP_000201080.1 | LacI family DNA-binding transcriptional regulator | - |
| K5610_RS12195 (2477219) | 2477219..2478685 | + | 1467 | WP_000987828.1 | hypothetical protein | - |
| K5610_RS12200 (2479493) | 2479493..2480207 | + | 715 | Protein_2399 | helix-turn-helix domain-containing protein | - |
| K5610_RS12205 (2480263) | 2480263..2481171 | - | 909 | WP_010989018.1 | hypothetical protein | - |
| K5610_RS12210 (2481314) | 2481314..2481646 | - | 333 | WP_000253154.1 | DUF1493 family protein | - |
| K5610_RS12215 (2481636) | 2481636..2481851 | - | 216 | WP_000206207.1 | hypothetical protein | - |
| K5610_RS12220 (2482003) | 2482003..2482251 | + | 249 | WP_000885424.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| K5610_RS12225 (2482241) | 2482241..2482525 | + | 285 | WP_000221343.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| K5610_RS12230 (2482696) | 2482696..2483085 | + | 390 | WP_000194089.1 | RidA family protein | - |
| K5610_RS12235 (2483137) | 2483137..2484216 | - | 1080 | WP_000954688.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| K5610_RS12240 (2484409) | 2484409..2484897 | - | 489 | WP_001293638.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| K5610_RS12245 (2484942) | 2484942..2486450 | + | 1509 | WP_000199411.1 | FAD-dependent oxidoreductase | - |
| K5610_RS12250 (2486440) | 2486440..2487681 | + | 1242 | WP_001095738.1 | MFS transporter | - |
| K5610_RS12255 (2487751) | 2487751..2489307 | + | 1557 | WP_000476912.1 | PhoPQ-activated pathogenicity-related family protein | - |
| K5610_RS12260 (2489484) | 2489484..2490770 | + | 1287 | WP_000824240.1 | MFS transporter | - |
| K5610_RS12265 (2490745) | 2490745..2491770 | + | 1026 | WP_000864924.1 | zinc-binding alcohol dehydrogenase family protein | - |
| K5610_RS12270 (2491829) | 2491829..2492620 | - | 792 | WP_001518759.1 | FadR/GntR family transcriptional regulator | - |
| K5610_RS12275 (2492666) | 2492666..2493757 | - | 1092 | WP_000976498.1 | linear amide C-N hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297233 | UFRD01000002 | 1156436..1168519 | 0 |