MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 93649 bp
Accession: NZ_AP023238 Location: 1..93649 Organism: Escherichia coli strain F070 Replicon: plasmid pF070-NDM5
Accession: NZ_AP023238 Location: 1..93649 Organism: Escherichia coli strain F070 Replicon: plasmid pF070-NDM5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FJI53_RS23345 () | 1..978 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| FJI53_RS23350 () | 1263..2003 | - | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| FJI53_RS23355 () | 2124..2306 | - | 183 | WP_042065278.1 | hypothetical protein | - |
| FJI53_RS23360 () | 2649..2956 | - | 308 | Protein_3 | type II toxin-antitoxin system ParD family antitoxin | - |
| FJI53_RS23365 () | 3449..4321 | + | 873 | WP_104989445.1 | hypothetical protein | - |
| FJI53_RS23370 () | 4355..5052 | + | 698 | Protein_5 | IS1 family transposase IS1R | Transposase |
| FJI53_RS23375 () | 5068..5187 | + | 120 | Protein_6 | ArsR family transcriptional regulator | - |
| FJI53_RS23380 () | 5165..5788 | - | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| FJI53_RS23385 () | 5870..7075 | + | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| FJI53_RS23390 () | 7188..7781 | - | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| FJI53_RS23395 () | 7915..8619 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| FJI53_RS23400 () | 8673..9038 | - | 366 | Protein_11 | chromate transporter | - |
| FJI53_RS23405 () | 9194..9397 | - | 204 | WP_000376616.1 | hypothetical protein | - |
| FJI53_RS23410 () | 9525..10364 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| FJI53_RS23415 () | 10358..10705 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| FJI53_RS23420 () | 10869..11660 | - | 792 | WP_001206356.1 | Streptomycin 3''-adenylyltransferase | ARG |
| FJI53_RS23425 () | 11666..11956 | - | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| FJI53_RS23430 () | 12068..12565 | - | 498 | WP_001083725.1 | Dihydrofolate reductase | ARG |
| FJI53_RS23435 () | 12710..13576 | + | 867 | Protein_18 | IS91 family transposase ISAzo26 | Transposase |
| FJI53_RS23440 () | 13631..14335 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| FJI53_RS23445 () | 14500..14793 | + | 294 | Protein_20 | IS30 family transposase | - |
| FJI53_RS23450 () | 14894..15706 | + | 813 | WP_023408309.1 | Metallo-beta-lactamase type 2 | ARG |
| FJI53_RS23455 () | 15710..16075 | + | 366 | WP_004201167.1 | bleomycin binding protein Ble-MBL | - |
| FJI53_RS23460 () | 16080..16718 | + | 639 | WP_004201168.1 | phosphoribosylanthranilate isomerase | - |
| FJI53_RS23465 () | 16729..17760 | - | 1032 | WP_004201169.1 | protein-disulfide reductase DsbD N-terminal domain-containing protein | - |
| FJI53_RS23470 () | 18073..19614 | - | 1542 | WP_000050481.1 | IS91 family transposase ISVsa3 | Transposase |
| FJI53_RS23475 () | 20019..20858 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| FJI53_RS23480 () | 20852..21199 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| FJI53_RS23485 () | 21405..22193 | - | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| FJI53_RS23490 () | 22324..22797 | - | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| FJI53_RS23495 () | 22955..23968 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| FJI53_RS23500 () | 24171..24317 | + | 147 | Protein_31 | EAL domain-containing protein | - |
| FJI53_RS23505 () | 24370..25074 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| FJI53_RS23510 () | 25233..25514 | - | 282 | Protein_33 | IS91 family transposase ISPps1 | Transposase |
| FJI53_RS23515 () | 25661..26521 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| FJI53_RS23520 () | 26704..26895 | - | 192 | Protein_35 | helix-turn-helix domain-containing protein | - |
| FJI53_RS23525 () | 26959..27663 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| FJI53_RS23530 () | 27718..28563 | - | 846 | Protein_37 | IS4 family transposase IS10R | Transposase |
| FJI53_RS23535 () | 28706..29566 | + | 861 | WP_000557454.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| FJI53_RS23540 () | 29579..30121 | + | 543 | WP_000587837.1 | AAA family ATPase | - |
| FJI53_RS23545 () | 30603..30794 | - | 192 | WP_000951934.1 | hypothetical protein | - |
| FJI53_RS23550 () | 30818..31045 | + | 228 | WP_000248278.1 | hypothetical protein | - |
| FJI53_RS23555 () | 31096..32223 | + | 1128 | WP_014837927.1 | DUF3883 domain-containing protein | - |
| FJI53_RS23560 () | 32260..32964 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| FJI53_RS23565 () | 33086..34000 | + | 915 | WP_023063803.1 | hypothetical protein | ARG |
| FJI53_RS23570 () | 33997..35235 | + | 1239 | WP_000004159.1 | MFS transporter | - |
| FJI53_RS23575 () | 35235..35819 | + | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| FJI53_RS23580 () | 36312..37076 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| FJI53_RS23585 () | 37216..37920 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| FJI53_RS23590 () | 37981..38817 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| FJI53_RS23595 () | 38817..39620 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| FJI53_RS23600 () | 39681..40496 | - | 816 | WP_001043265.1 | Dihydropteroate synthase | ARG |
| FJI53_RS23605 () | 40804..41655 | - | 852 | WP_000240536.1 | replication protein | - |
| FJI53_RS23610 () | 41642..42361 | - | 720 | Protein_53 | AAA family ATPase | - |
| FJI53_RS23615 () | 42411..43115 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| FJI53_RS23620 () | 43315..43869 | - | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| FJI53_RS23625 () | 44013..44717 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| FJI53_RS23630 () | 44780..47125 | + | 2346 | Protein_57 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| FJI53_RS23635 () | 47262..47663 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| FJI53_RS23640 () | 47596..47853 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| FJI53_RS23645 () | 47946..48599 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| FJI53_RS23650 () | 49539..50396 | - | 858 | WP_000130640.1 | incFII family plasmid replication initiator RepA | - |
| FJI53_RS23655 () | 50389..50463 | - | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| FJI53_RS23910 () | 50460..50594 | - | 135 | Protein_63 | protein CopA/IncA | - |
| FJI53_RS23660 () | 50825..52366 | + | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| FJI53_RS23665 () | 52381..53127 | + | 747 | WP_053906593.1 | IS21 family transposase ISEc12 | Transposase |
| FJI53_RS23670 () | 53287..53541 | - | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| FJI53_RS23675 () | 53838..53972 | - | 135 | WP_023144756.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 54017..54077 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 54017..54077 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 54017..54077 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - () | 54017..54077 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| FJI53_RS23680 () | 54044..54330 | - | 287 | Protein_68 | DUF2726 domain-containing protein | - |
| FJI53_RS23685 () | 54843..55055 | - | 213 | WP_013023861.1 | hypothetical protein | - |
| FJI53_RS23690 () | 55186..55746 | - | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| FJI53_RS23695 () | 55801..56547 | - | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| FJI53_RS23700 () | 56567..58960 | - | 2394 | Protein_72 | Multifunctional conjugation protein TraI | Relaxase |
| FJI53_RS23705 () | 58930..60012 | - | 1083 | WP_060621339.1 | DUF3560 domain-containing protein | - |
| FJI53_RS23710 () | 60064..60294 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| FJI53_RS23715 () | 61329..61520 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| FJI53_RS23720 () | 61517..61657 | - | 141 | WP_162752839.1 | hypothetical protein | - |
| FJI53_RS23725 () | 61657..61938 | - | 282 | WP_136512299.1 | DUF1380 family protein | - |
| FJI53_RS23730 () | 61985..62287 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| FJI53_RS23735 () | 62827..63603 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| FJI53_RS23740 () | 63654..64088 | - | 435 | WP_000274437.1 | DUF1380 family protein | - |
| FJI53_RS23745 () | 64102..64323 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| FJI53_RS23750 () | 64324..65007 | - | 684 | WP_000086185.1 | DNA methylase | - |
| FJI53_RS23755 () | 65084..65388 | - | 305 | Protein_83 | hypothetical protein | - |
| FJI53_RS23760 () | 65392..66294 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| FJI53_RS23765 () | 67161..68132 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| FJI53_RS23770 () | 68132..69298 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| FJI53_RS23775 () | 69886..70641 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| FJI53_RS23780 () | 71415..72221 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| FJI53_RS23785 () | 72222..72527 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| FJI53_RS23790 () | 72529..72747 | - | 219 | WP_023909027.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| FJI53_RS23795 () | 73381..73578 | + | 198 | WP_000215657.1 | hypothetical protein | - |
| FJI53_RS23800 () | 73575..73859 | - | 285 | WP_000642771.1 | hypothetical protein | - |
| FJI53_RS23805 () | 73879..75012 | - | 1134 | WP_000545983.1 | DUF3800 domain-containing protein | - |
| FJI53_RS23810 () | 75275..78394 | - | 3120 | WP_023909028.1 | hypothetical protein | - |
| FJI53_RS23815 () | 78701..78931 | + | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| FJI53_RS23820 () | 78928..79344 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| FJI53_RS23825 () | 79506..81644 | - | 2139 | WP_000350635.1 | AAA family ATPase | - |
| FJI53_RS23830 () | 82109..83104 | + | 996 | WP_000246636.1 | hypothetical protein | - |
| FJI53_RS23835 () | 83108..84040 | + | 933 | WP_000991832.1 | hypothetical protein | - |
| FJI53_RS23840 () | 84177..84874 | - | 698 | Protein_100 | IS1 family transposase IS1R | Transposase |
| FJI53_RS23845 () | 85088..88204 | - | 3117 | WP_031311986.1 | HsdR family type I site-specific deoxyribonuclease | - |
| FJI53_RS23850 () | 88326..89609 | - | 1284 | WP_001617890.1 | restriction endonuclease subunit S | - |
| FJI53_RS23855 () | 89606..91162 | - | 1557 | WP_001553856.1 | type I restriction-modification system subunit M | - |
| FJI53_RS23860 () | 91345..91566 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| FJI53_RS23865 () | 91566..91946 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| FJI53_RS23870 () | 91951..92130 | + | 180 | WP_001513661.1 | hypothetical protein | - |
| FJI53_RS23875 () | 92158..92517 | + | 360 | WP_001513660.1 | hypothetical protein | - |
| FJI53_RS23880 () | 92441..92854 | + | 414 | Protein_108 | IS3 family transposase ISLad1 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|