MGE detailed information
MGE type: Genomic_island MGE length: 50898 bp
Accession: NZ_AP023224 Location: 4134611..4185508 Organism: Escherichia coli strain YJ1 Replicon: chromosome
Accession: NZ_AP023224 Location: 4134611..4185508 Organism: Escherichia coli strain YJ1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HXS59_RS19865 () | 4131142..4131867 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| HXS59_RS19870 () | 4131904..4132443 | - | 540 | WP_000824105.1 | type 1 fimbrial protein | - |
| HXS59_RS19875 () | 4132508..4133056 | - | 549 | WP_000695546.1 | type 1 fimbrial major subunit FimA | - |
| HXS59_RS19880 () | 4133537..4134133 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| HXS59_RS19885 () | 4134611..4135213 | - | 603 | WP_000790583.1 | hypothetical protein | VF |
| HXS59_RS19890 () | 4136669..4137385 | + | 717 | Protein_3886 | N-acetylneuraminic acid outer membrane channel NanC | - |
| HXS59_RS19895 () | 4137405..4138511 | + | 1107 | WP_001341302.1 | N-acetylneuraminate epimerase | - |
| HXS59_RS19900 () | 4138576..4139556 | + | 981 | WP_000991415.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| HXS59_RS19905 () | 4139564..4140214 | - | 651 | WP_001037966.1 | HNH endonuclease | - |
| HXS59_RS19910 () | 4141259..4141405 | - | 147 | WP_001290178.1 | hypothetical protein | - |
| HXS59_RS19915 () | 4141490..4141687 | - | 198 | WP_001327226.1 | DUF957 domain-containing protein | - |
| HXS59_RS19920 () | 4141707..4142195 | - | 489 | WP_000761685.1 | hypothetical protein | - |
| HXS59_RS19925 () | 4142192..4142569 | - | 378 | WP_001094444.1 | TA system toxin CbtA family protein | Toxin Detail |
| HXS59_RS19930 () | 4142659..4143027 | - | 369 | WP_001285607.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HXS59_RS19935 () | 4143107..4143328 | - | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| HXS59_RS19940 () | 4143415..4143891 | - | 477 | WP_001384029.1 | RadC family protein | - |
| HXS59_RS19945 () | 4143906..4144391 | - | 486 | WP_000213722.1 | antirestriction protein | - |
| HXS59_RS19950 () | 4144483..4145301 | - | 819 | WP_085668755.1 | DUF945 domain-containing protein | - |
| HXS59_RS19955 () | 4145391..4145600 | - | 210 | WP_032150870.1 | DUF905 family protein | - |
| HXS59_RS19960 () | 4145630..4146307 | - | 678 | WP_001097301.1 | hypothetical protein | - |
| HXS59_RS19965 () | 4146455..4147135 | - | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| HXS59_RS19970 () | 4147338..4148222 | - | 885 | WP_000010408.1 | 50S ribosome-binding GTPase | - |
| HXS59_RS19975 () | 4148407..4149537 | + | 1131 | WP_047928958.1 | hypothetical protein | - |
| HXS59_RS19980 () | 4151016..4151747 | + | 732 | WP_001075464.1 | inovirus Gp2 family protein | - |
| HXS59_RS19985 () | 4152075..4152953 | + | 879 | WP_000769116.1 | restriction endonuclease | - |
| HXS59_RS19990 () | 4153007..4153581 | + | 575 | Protein_3906 | transposase | - |
| HXS59_RS19995 () | 4153714..4154489 | - | 776 | Protein_3907 | DDE-type integrase/transposase/recombinase | - |
| HXS59_RS20000 () | 4154710..4155150 | + | 441 | WP_000038139.1 | H-NS histone family protein | - |
| HXS59_RS20005 () | 4155418..4155546 | + | 129 | Protein_3909 | IS256 family transposase | - |
| HXS59_RS20010 () | 4155576..4155925 | - | 350 | Protein_3910 | transposase | - |
| HXS59_RS20015 () | 4157089..4157655 | + | 567 | WP_001126809.1 | inovirus-type Gp2 protein | - |
| HXS59_RS20020 () | 4157902..4158477 | + | 576 | WP_000991596.1 | hypothetical protein | - |
| HXS59_RS20025 () | 4158546..4158779 | + | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| HXS59_RS20030 () | 4159036..4159548 | + | 513 | WP_001167442.1 | hypothetical protein | - |
| HXS59_RS20035 () | 4160144..4160746 | + | 603 | WP_001204062.1 | hypothetical protein | - |
| HXS59_RS20040 () | 4160756..4161739 | + | 984 | WP_000074845.1 | DUF4868 domain-containing protein | - |
| HXS59_RS20045 () | 4161826..4162316 | + | 491 | Protein_3917 | transposase | - |
| HXS59_RS20050 () | 4162376..4163114 | + | 739 | Protein_3918 | IS3 family transposase IS1203 | Transposase |
| HXS59_RS20055 () | 4163772..4163927 | + | 156 | WP_072258860.1 | reverse transcriptase-like protein | - |
| HXS59_RS20060 () | 4163978..4165090 | + | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| HXS59_RS20065 () | 4165263..4166645 | + | 1383 | Protein_3921 | group II intron reverse transcriptase/maturase | - |
| HXS59_RS20070 () | 4166735..4167208 | + | 474 | Protein_3922 | IS3 family transposase IS629 | Transposase |
| HXS59_RS20075 () | 4167391..4168014 | + | 624 | WP_001470157.1 | hypothetical protein | - |
| HXS59_RS20080 () | 4168149..4169739 | - | 1591 | Protein_3924 | IS3 family transposase | - |
| HXS59_RS20085 () | 4169848..4170048 | + | 201 | WP_012311738.1 | hypothetical protein | - |
| HXS59_RS20090 () | 4170138..4170524 | + | 387 | WP_001342709.1 | hypothetical protein | - |
| HXS59_RS20095 () | 4170582..4171616 | - | 1035 | WP_000774671.1 | virulence RhuM family protein | - |
| HXS59_RS20100 () | 4171652..4172491 | - | 840 | WP_000350135.1 | hypothetical protein | - |
| HXS59_RS20105 () | 4172494..4173048 | - | 555 | WP_001090220.1 | hypothetical protein | - |
| HXS59_RS20110 () | 4173048..4176284 | - | 3237 | WP_000718842.1 | type I restriction endonuclease subunit R | - |
| HXS59_RS20115 () | 4176284..4177570 | - | 1287 | WP_000991122.1 | restriction endonuclease subunit S | - |
| HXS59_RS20120 () | 4177570..4179549 | - | 1980 | WP_001053122.1 | type I restriction-modification system subunit M | - |
| HXS59_RS20125 () | 4179616..4180113 | - | 498 | WP_000648433.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| HXS59_RS20130 () | 4180386..4181083 | + | 698 | Protein_3934 | IS1 family transposase | - |
| HXS59_RS20135 () | 4181100..4181276 | - | 177 | Protein_3935 | integrase | - |
| HXS59_RS20140 () | 4181506..4182246 | + | 741 | WP_001477155.1 | porin family protein | - |
| HXS59_RS20145 () | 4182420..4183919 | + | 1500 | WP_012311728.1 | phosphoethanolamine transferase | - |
| HXS59_RS20150 () | 4184243..4185508 | - | 1266 | WP_001218930.1 | hypothetical protein ; Integrase | Integrase |
| HXS59_RS20160 () | 4185975..4186994 | + | 1020 | WP_000061768.1 | NADPH-dependent aldehyde reductase Ahr | - |
| HXS59_RS20165 () | 4187124..4188626 | + | 1503 | WP_001376011.1 | DUF853 domain-containing protein | - |
| HXS59_RS20170 () | 4188787..4189869 | - | 1083 | WP_001295681.1 | LPS export ABC transporter permease LptG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|