MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 94946 bp
Accession: NZ_AP023213 Location: 3056379..3151324 Organism: Geobacter bremensis strain R4 Replicon: chromosome
Accession: NZ_AP023213 Location: 3056379..3151324 Organism: Geobacter bremensis strain R4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GEOBRER4_RS13385 () | 3051415..3052260 | + | 846 | WP_185242721.1 | TonB family protein | - |
| GEOBRER4_RS13390 () | 3052257..3053123 | - | 867 | WP_185242722.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| GEOBRER4_RS13395 () | 3053197..3054042 | - | 846 | WP_085812123.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD | - |
| GEOBRER4_RS13400 () | 3054215..3054454 | - | 240 | WP_185242723.1 | zinc ribbon domain-containing protein | - |
| GEOBRER4_RS13405 () | 3054539..3055000 | - | 462 | WP_185242724.1 | CBS domain-containing protein | - |
| GEOBRER4_RS13410 () | 3055010..3055309 | - | 300 | WP_185242725.1 | YggU family protein | - |
| GEOBRER4_RS13415 () | 3055306..3055752 | - | 447 | WP_185242726.1 | DivIVA domain-containing protein | - |
| GEOBRER4_RS13420 () | 3055749..3056078 | - | 330 | WP_085812117.1 | YggT family protein | - |
| GEOBRER4_RS13430 () | 3056423..3057751 | - | 1329 | WP_185242727.1 | hypothetical protein ; Integrase | Integrase |
| GEOBRER4_RS13435 () | 3057818..3058150 | - | 333 | WP_185242728.1 | hypothetical protein | - |
| GEOBRER4_RS13440 () | 3058279..3059394 | + | 1116 | WP_185242729.1 | helix-turn-helix domain containing protein | - |
| GEOBRER4_RS13445 () | 3059565..3061598 | - | 2034 | WP_185242730.1 | AAA family ATPase | - |
| GEOBRER4_RS13450 () | 3061595..3068083 | - | 6489 | WP_185242731.1 | DEAD/DEAH box helicase | - |
| GEOBRER4_RS13455 () | 3068087..3073045 | - | 4959 | WP_185242732.1 | class I SAM-dependent DNA methyltransferase | - |
| GEOBRER4_RS13460 () | 3073049..3075931 | - | 2883 | WP_185242733.1 | DEAD/DEAH box helicase | - |
| GEOBRER4_RS13465 () | 3076258..3079509 | - | 3252 | WP_185242734.1 | DEAD/DEAH box helicase | - |
| GEOBRER4_RS13470 () | 3079506..3081416 | - | 1911 | WP_185242735.1 | phospholipase D family protein | - |
| GEOBRER4_RS13475 () | 3081409..3082695 | - | 1287 | WP_185242736.1 | hypothetical protein | - |
| GEOBRER4_RS13480 () | 3082867..3084870 | - | 2004 | WP_185242737.1 | DEAD/DEAH box helicase | - |
| GEOBRER4_RS13485 () | 3084887..3086359 | - | 1473 | WP_185242738.1 | DUF2791 family P-loop domain-containing protein | - |
| GEOBRER4_RS13490 () | 3086356..3087654 | - | 1299 | WP_185242739.1 | DUF2791 family P-loop domain-containing protein | - |
| GEOBRER4_RS13495 () | 3087677..3088534 | - | 858 | WP_185242740.1 | hypothetical protein | - |
| GEOBRER4_RS13500 () | 3088549..3091053 | - | 2505 | WP_185242741.1 | hypothetical protein | - |
| GEOBRER4_RS13505 () | 3091343..3092074 | - | 732 | WP_185245331.1 | hypothetical protein | - |
| GEOBRER4_RS13510 () | 3092264..3092632 | - | 369 | WP_185242742.1 | hypothetical protein | - |
| GEOBRER4_RS13515 () | 3092681..3094534 | - | 1854 | WP_185242743.1 | NERD domain-containing protein | - |
| GEOBRER4_RS13520 () | 3094927..3095898 | - | 972 | WP_185242744.1 | WYL domain-containing protein | - |
| GEOBRER4_RS13525 () | 3096233..3096470 | + | 238 | Protein_2657 | IS3 family transposase | - |
| GEOBRER4_RS13530 () | 3096560..3097948 | - | 1389 | WP_185242745.1 | hypothetical protein | - |
| GEOBRER4_RS13535 () | 3098182..3099315 | - | 1134 | WP_185242746.1 | hypothetical protein | - |
| GEOBRER4_RS13540 () | 3099443..3099778 | - | 336 | WP_185242747.1 | hypothetical protein | - |
| GEOBRER4_RS13545 () | 3100204..3100743 | - | 540 | WP_185242748.1 | hypothetical protein | - |
| GEOBRER4_RS13550 () | 3101035..3101682 | - | 648 | WP_185242749.1 | hypothetical protein | - |
| GEOBRER4_RS13555 () | 3101774..3103399 | - | 1626 | WP_185242750.1 | ADP-ribosylglycohydrolase family protein | - |
| GEOBRER4_RS13560 () | 3104066..3104527 | + | 462 | WP_185242751.1 | HNH endonuclease | - |
| GEOBRER4_RS13565 () | 3104958..3105236 | - | 279 | WP_185242752.1 | hypothetical protein | - |
| GEOBRER4_RS13570 () | 3105492..3105743 | - | 252 | WP_185242753.1 | hypothetical protein | - |
| GEOBRER4_RS13575 () | 3106142..3106423 | + | 282 | WP_185242754.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| GEOBRER4_RS13580 () | 3106426..3106845 | + | 420 | WP_185245332.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| GEOBRER4_RS13585 () | 3107566..3110715 | - | 3150 | WP_185242755.1 | UvrD-helicase domain-containing protein | - |
| GEOBRER4_RS13590 () | 3110715..3113381 | - | 2667 | WP_185242756.1 | PD-(D/E)XK nuclease family protein | - |
| GEOBRER4_RS13595 () | 3113518..3114858 | - | 1341 | WP_185242757.1 | hypothetical protein | - |
| GEOBRER4_RS13600 () | 3115142..3115753 | + | 612 | WP_185242758.1 | hypothetical protein | - |
| GEOBRER4_RS13605 () | 3115784..3117307 | - | 1524 | WP_185242759.1 | HEAT repeat domain-containing protein | - |
| GEOBRER4_RS13610 () | 3117343..3117735 | - | 393 | WP_185242760.1 | hypothetical protein | - |
| GEOBRER4_RS13615 () | 3117732..3118889 | - | 1158 | WP_185242761.1 | hypothetical protein | - |
| GEOBRER4_RS13620 () | 3119334..3119570 | - | 237 | WP_185242762.1 | hypothetical protein | - |
| GEOBRER4_RS13625 () | 3119810..3120100 | - | 291 | WP_185242763.1 | hypothetical protein | - |
| GEOBRER4_RS13630 () | 3120588..3121061 | - | 474 | WP_185242764.1 | hypothetical protein | - |
| GEOBRER4_RS13635 () | 3121061..3121489 | - | 429 | WP_185242765.1 | HNH endonuclease | - |
| GEOBRER4_RS13640 () | 3121553..3121894 | - | 342 | WP_185242766.1 | hypothetical protein | - |
| GEOBRER4_RS13645 () | 3122035..3122418 | + | 384 | WP_185242767.1 | helix-turn-helix domain-containing protein | - |
| GEOBRER4_RS13650 () | 3122576..3122785 | - | 210 | WP_185245333.1 | hypothetical protein | - |
| GEOBRER4_RS13655 () | 3122895..3123887 | + | 993 | WP_185242768.1 | WYL domain-containing protein | - |
| GEOBRER4_RS13660 () | 3123947..3124888 | + | 942 | WP_185242769.1 | hypothetical protein | - |
| GEOBRER4_RS13665 () | 3125065..3125391 | + | 327 | WP_185242770.1 | transcriptional regulator | - |
| GEOBRER4_RS13670 () | 3125550..3126326 | - | 777 | WP_185242771.1 | IS3 family transposase | - |
| GEOBRER4_RS13675 () | 3127418..3127684 | + | 267 | WP_185242772.1 | hypothetical protein | - |
| GEOBRER4_RS13680 () | 3128196..3128441 | - | 246 | WP_185242773.1 | hypothetical protein | - |
| GEOBRER4_RS13685 () | 3128721..3128858 | - | 138 | WP_185242774.1 | hypothetical protein | - |
| GEOBRER4_RS13690 () | 3129903..3130664 | - | 762 | WP_185242775.1 | metallophosphoesterase | - |
| GEOBRER4_RS13695 () | 3130769..3131188 | - | 420 | WP_197971385.1 | ADP-ribosylglycohydrolase family protein | - |
| GEOBRER4_RS13700 () | 3131383..3132932 | + | 1550 | WP_185245335.1 | IS3 family transposase ISGur5 | Transposase |
| GEOBRER4_RS13705 () | 3132886..3134163 | - | 1278 | WP_185242776.1 | ADP-ribosylglycohydrolase family protein | - |
| GEOBRER4_RS13710 () | 3134507..3135166 | + | 660 | WP_185242777.1 | hypothetical protein | - |
| GEOBRER4_RS13715 () | 3135225..3136250 | + | 1026 | WP_185242778.1 | ATP-binding protein | - |
| GEOBRER4_RS13720 () | 3136286..3137554 | + | 1269 | WP_185242779.1 | hypothetical protein | - |
| GEOBRER4_RS13725 () | 3137551..3139269 | + | 1719 | WP_185242780.1 | hypothetical protein | - |
| GEOBRER4_RS13730 () | 3139266..3139898 | + | 633 | WP_185242781.1 | OmpA family protein | - |
| GEOBRER4_RS13735 () | 3139967..3142315 | + | 2349 | WP_185242782.1 | dynamin family protein | - |
| GEOBRER4_RS13740 () | 3142331..3144580 | + | 2250 | WP_185242783.1 | dynamin family protein | - |
| GEOBRER4_RS13745 () | 3144606..3144983 | + | 378 | WP_185242784.1 | hypothetical protein | - |
| GEOBRER4_RS13750 () | 3144997..3145782 | + | 786 | WP_185242785.1 | hypothetical protein | - |
| GEOBRER4_RS13755 () | 3145785..3147266 | + | 1482 | WP_185242786.1 | hypothetical protein | - |
| GEOBRER4_RS13760 () | 3147366..3149540 | + | 2175 | WP_185242787.1 | AAA family ATPase | - |
| GEOBRER4_RS13765 () | 3149603..3150367 | - | 765 | WP_185242788.1 | ATP-binding protein | - |
| GEOBRER4_RS13770 () | 3150364..3150756 | - | 393 | WP_185242789.1 | hypothetical protein | - |
| GEOBRER4_RS13775 () | 3151793..3152110 | - | 318 | WP_185242790.1 | hypothetical protein | - |
| GEOBRER4_RS13780 () | 3152498..3153424 | + | 927 | WP_185242791.1 | phosphate/phosphite/phosphonate ABC transporter substrate-binding protein | - |
| GEOBRER4_RS13785 () | 3153432..3156092 | + | 2661 | WP_185242792.1 | response regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|