MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 93845 bp
Accession: NZ_AP023207 Location: 1..93845 Organism: Escherichia coli strain TUM18781 Replicon: plasmid pMTY18781-2
Accession: NZ_AP023207 Location: 1..93845 Organism: Escherichia coli strain TUM18781 Replicon: plasmid pMTY18781-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUV20_RS21490 () | 41..148 | + | 108 | Protein_0 | TetR/AcrR family transcriptional regulator | - |
| HUV20_RS21495 () | 132..770 | - | 639 | WP_001119478.1 | cell division protein YtfB | - |
| HUV20_RS21500 () | 989..1609 | + | 621 | WP_000211225.1 | FKBP-type peptidyl-prolyl cis-trans isomerase | - |
| HUV20_RS21505 () | 1918..3330 | + | 1413 | WP_000228346.1 | D-serine/D-alanine/glycine transporter | - |
| HUV20_RS21510 () | 3375..4037 | - | 663 | WP_000331456.1 | iron-sulfur cluster repair protein YtfE | - |
| HUV20_RS21515 () | 4151..5110 | - | 960 | WP_000623295.1 | DMT family transporter | - |
| HUV20_RS21520 () | 5218..6078 | - | 861 | WP_000560563.1 | NAD(P)H:quinone oxidoreductase | - |
| HUV20_RS21525 () | 6167..6547 | + | 381 | WP_000084622.1 | helix-turn-helix transcriptional regulator | - |
| HUV20_RS21530 () | 6676..8619 | - | 1944 | WP_000589460.1 | 2',3'-cyclic-nucleotide 2'-phosphodiesterase | - |
| HUV20_RS21535 () | 8809..9549 | + | 741 | WP_000886909.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| HUV20_RS21540 () | 9539..10096 | - | 558 | WP_000175289.1 | YtfJ family protein | - |
| HUV20_RS21545 () | 10421..10627 | + | 207 | WP_000689228.1 | DUF1107 domain-containing protein | - |
| HUV20_RS21550 () | 10689..12032 | - | 1344 | WP_000935036.1 | hemolysin family protein | - |
| HUV20_RS21555 () | 12355..12993 | - | 639 | WP_001355799.1 | peptide-methionine (S)-S-oxide reductase MsrA | - |
| HUV20_RS21560 () | 13199..14932 | + | 1734 | WP_001269327.1 | autotransporter assembly complex protein TamA | - |
| HUV20_RS21565 () | 14929..18708 | + | 3780 | WP_000060896.1 | autotransporter assembly complex protein TamB | - |
| HUV20_RS21570 () | 18711..19052 | + | 342 | WP_001219160.1 | gamma-glutamylcyclotransferase | - |
| HUV20_RS21575 () | 19264..19515 | + | 252 | WP_001223208.1 | type II toxin-antitoxin system antitoxin ChpS | Antitoxin Detail |
| HUV20_RS21580 () | 19509..19859 | + | 351 | WP_000239579.1 | endoribonuclease toxin ChpB | Toxin Detail |
| HUV20_RS21585 () | 19939..20469 | - | 531 | WP_000055075.1 | inorganic diphosphatase | - |
| HUV20_RS21590 () | 20779..21735 | + | 957 | WP_000265933.1 | galactofuranose ABC transporter substrate-binding protein YtfQ | - |
| HUV20_RS21595 () | 21875..23377 | + | 1503 | WP_000210554.1 | sugar ABC transporter ATP-binding protein | - |
| HUV20_RS21600 () | 23391..24413 | + | 1023 | WP_001368084.1 | ABC transporter permease | - |
| HUV20_RS21605 () | 24400..25395 | + | 996 | WP_000595979.1 | sugar ABC transporter permease YjfF | - |
| HUV20_RS21610 () | 25428..26426 | - | 999 | WP_000853753.1 | class 1 fructose-bisphosphatase | - |
| HUV20_RS21615 () | 26602..27975 | + | 1374 | WP_001219792.1 | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | - |
| HUV20_RS21620 () | 28131..28682 | - | 552 | WP_000166270.1 | ribosome-associated protein | - |
| HUV20_RS21625 () | 28776..30128 | + | 1353 | WP_001162171.1 | metalloprotease PmbA | - |
| HUV20_RS21630 () | 30311..30697 | + | 387 | WP_001232242.1 | cytochrome b562 | - |
| HUV20_RS21635 () | 30742..31206 | - | 465 | WP_001106233.1 | anaerobic ribonucleoside-triphosphate reductase-activating protein | - |
| HUV20_RS21640 () | 31364..33502 | - | 2139 | WP_000187778.1 | anaerobic ribonucleoside-triphosphate reductase | - |
| HUV20_RS21645 () | 33896..35551 | - | 1656 | WP_001331056.1 | alpha,alpha-phosphotrehalase | - |
| HUV20_RS21650 () | 35601..37022 | - | 1422 | WP_001299664.1 | PTS trehalose transporter subunit IIBC | - |
| HUV20_RS21655 () | 37141..38088 | - | 948 | WP_001181324.1 | trehalose operon repressor TreR | - |
| HUV20_RS21660 () | 38273..38326 | + | 54 | WP_001387276.1 | mgtA regulatory leader peptide MgtL | - |
| HUV20_RS21665 () | 38467..41163 | + | 2697 | WP_000471866.1 | magnesium-translocating P-type ATPase | - |
| HUV20_RS21670 () | 41208..41663 | - | 456 | WP_001118337.1 | transposase | - |
| HUV20_RS21675 () | 41729..42115 | - | 387 | WP_000047539.1 | 2-iminobutanoate/2-iminopropanoate deaminase | - |
| HUV20_RS21680 () | 42188..42649 | - | 462 | WP_000148581.1 | aspartate carbamoyltransferase regulatory subunit | - |
| HUV20_RS21685 () | 42662..43597 | - | 936 | WP_000013046.1 | aspartate carbamoyltransferase | - |
| HUV20_RS21690 () | 43601..43735 | - | 135 | WP_001296693.1 | pyr operon leader peptide | - |
| HUV20_RS21695 () | 44016..44411 | - | 396 | WP_000230281.1 | RidA family protein | - |
| HUV20_RS21700 () | 44542..45255 | - | 714 | WP_089586167.1 | SDR family oxidoreductase | - |
| HUV20_RS21705 () | 45326..45919 | + | 594 | WP_000256656.1 | TetR/AcrR family transcriptional regulator | - |
| HUV20_RS21710 () | 46064..46516 | + | 453 | WP_000583470.1 | toxin-antitoxin biofilm protein TabA | - |
| HUV20_RS21715 () | 46639..47958 | + | 1320 | WP_106376522.1 | DNA-binding protein | - |
| HUV20_RS21720 () | 47945..48175 | + | 231 | WP_001309158.1 | hypothetical protein | - |
| HUV20_RS21725 () | 48276..49280 | - | 1005 | WP_000086237.1 | ornithine carbamoyltransferase | - |
| HUV20_RS21730 () | 49442..49858 | + | 417 | WP_000002953.1 | ribonuclease E inhibitor RraB | - |
| HUV20_RS21735 () | 49904..50407 | - | 504 | WP_001059414.1 | GNAT family N-acetyltransferase | - |
| HUV20_RS21740 () | 50600..51796 | + | 1197 | WP_000079641.1 | DUF898 domain-containing protein | - |
| HUV20_RS21745 () | 51852..54707 | - | 2856 | WP_000416392.1 | valine--tRNA ligase | - |
| HUV20_RS21750 () | 54707..55150 | - | 444 | WP_000786399.1 | DNA polymerase III subunit chi | - |
| HUV20_RS21755 () | 55284..56795 | - | 1512 | WP_000397144.1 | leucyl aminopeptidase | - |
| HUV20_RS21760 () | 57062..58162 | + | 1101 | WP_000584114.1 | LPS export ABC transporter permease LptF | - |
| HUV20_RS21765 () | 58162..59244 | + | 1083 | WP_001295681.1 | LPS export ABC transporter permease LptG | - |
| HUV20_RS21770 () | 59363..60865 | - | 1503 | WP_001294545.1 | DUF853 domain-containing protein | - |
| HUV20_RS21775 () | 60948..61157 | - | 210 | WP_001514390.1 | hypothetical protein | - |
| HUV20_RS21785 () | 61677..62948 | + | 1272 | WP_053264522.1 | integrase arm-type DNA-binding domain-containing protein | - |
| HUV20_RS21790 () | 63153..64028 | + | 876 | WP_044066756.1 | HNH endonuclease | - |
| HUV20_RS21795 () | 64106..65071 | - | 966 | WP_053264523.1 | 5'-nucleotidase | - |
| HUV20_RS21800 () | 65221..69012 | + | 3792 | WP_053264524.1 | SIR2 family protein | - |
| HUV20_RS21805 () | 69053..69739 | - | 687 | WP_053264525.1 | hypothetical protein | - |
| HUV20_RS21810 () | 69800..70858 | - | 1059 | WP_174402760.1 | restriction endonuclease subunit S | - |
| HUV20_RS21815 () | 70963..72597 | - | 1635 | WP_053264527.1 | type I restriction-modification system subunit M | - |
| HUV20_RS21820 () | 72661..76074 | - | 3414 | WP_053264528.1 | DEAD/DEAH box helicase family protein | - |
| HUV20_RS21825 () | 76650..77333 | + | 684 | WP_064759377.1 | WYL domain-containing protein | - |
| HUV20_RS21830 () | 77372..78385 | + | 1014 | WP_000342611.1 | 50S ribosome-binding GTPase | - |
| HUV20_RS21835 () | 78397..79182 | + | 786 | WP_053264530.1 | hypothetical protein | - |
| HUV20_RS21840 () | 79397..79615 | - | 219 | WP_001064742.1 | AlpA family phage regulatory protein | - |
| HUV20_RS21845 () | 79733..80347 | - | 615 | WP_000772910.1 | inovirus Gp2 family protein | - |
| HUV20_RS21850 () | 80940..81893 | + | 954 | WP_053264531.1 | hypothetical protein | - |
| HUV20_RS21855 () | 82129..82947 | + | 819 | WP_053264532.1 | DUF945 domain-containing protein | - |
| HUV20_RS21860 () | 82977..83450 | + | 474 | WP_001296921.1 | DNA repair protein RadC | - |
| HUV20_RS21865 () | 83450..83785 | + | 336 | WP_053264533.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HUV20_RS21870 () | 83816..84157 | + | 342 | WP_089586169.1 | TA system toxin CbtA family protein | Toxin Detail |
| HUV20_RS21875 () | 84272..85105 | + | 834 | WP_053264535.1 | DUF4942 domain-containing protein | - |
| HUV20_RS21880 () | 85175..85570 | + | 396 | WP_000152741.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| HUV20_RS21885 () | 85563..86510 | + | 948 | WP_000342497.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| HUV20_RS21890 () | 87112..87762 | + | 651 | WP_001037963.1 | HNH endonuclease | - |
| HUV20_RS21895 () | 87770..88750 | - | 981 | WP_053264536.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| HUV20_RS21900 () | 88815..89921 | - | 1107 | WP_032217392.1 | N-acetylneuraminate epimerase | - |
| HUV20_RS21905 () | 89941..90657 | - | 717 | WP_021534608.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| HUV20_RS21910 () | 92113..92721 | + | 609 | WP_086629326.1 | type 1 fimbria switch DNA invertase FimB | - |
| HUV20_RS21915 () | 93193..93789 | + | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|