MGE detailed information
MGE type: Genomic_island MGE length: 24720 bp
Accession: NZ_AP023190 Location: 4373276..4397995 Organism: Escherichia coli strain TUM18530 Replicon: chromosome
Accession: NZ_AP023190 Location: 4373276..4397995 Organism: Escherichia coli strain TUM18530 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUV24_RS20605 () | 4368647..4369831 | + | 1185 | WP_001218742.1 | tyrosine-type recombinase/integrase | - |
| HUV24_RS20610 () | 4369981..4370991 | + | 1011 | WP_000053333.1 | substrate-binding domain-containing protein | - |
| HUV24_RS20615 () | 4371087..4373213 | + | 2127 | WP_000253907.1 | alpha-galactosidase | - |
| HUV24_RS20620 () | 4373276..4374553 | + | 1278 | WP_001083367.1 | MFS transporter | - |
| HUV24_RS20625 () | 4374550..4375983 | + | 1434 | WP_024184926.1 | glycoside hydrolase family 32 protein | - |
| HUV24_RS20630 () | 4376178..4377572 | + | 1395 | WP_001037798.1 | carbohydrate porin | - |
| HUV24_RS20635 () | 4377646..4377822 | + | 177 | WP_162843692.1 | hypothetical protein | - |
| HUV24_RS20640 () | 4378088..4378785 | - | 698 | Protein_4033 | IS1 family transposase IS1R | Transposase |
| HUV24_RS20645 () | 4378841..4379518 | - | 678 | Protein_4034 | hypothetical protein | - |
| HUV24_RS20650 () | 4379703..4380587 | + | 885 | WP_000010408.1 | 50S ribosome-binding GTPase | - |
| HUV24_RS20655 () | 4380790..4381470 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| HUV24_RS20660 () | 4381618..4382295 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| HUV24_RS20665 () | 4382325..4382534 | + | 210 | WP_174402685.1 | DUF905 family protein | - |
| HUV24_RS20670 () | 4382624..4383442 | + | 819 | WP_001175175.1 | DUF945 domain-containing protein | - |
| HUV24_RS20675 () | 4383534..4384019 | + | 486 | WP_000213722.1 | antirestriction protein | - |
| HUV24_RS20680 () | 4384034..4384510 | + | 477 | WP_001384029.1 | RadC family protein | - |
| HUV24_RS20685 () | 4384597..4384818 | + | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| HUV24_RS20690 () | 4384898..4385266 | + | 369 | WP_001285607.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| HUV24_RS20695 () | 4385356..4385733 | + | 378 | WP_039023548.1 | TA system toxin CbtA family protein | Toxin Detail |
| HUV24_RS20700 () | 4385730..4385900 | + | 171 | Protein_4045 | hypothetical protein | - |
| HUV24_RS20705 () | 4385955..4386152 | + | 198 | WP_088172489.1 | DUF957 domain-containing protein | - |
| HUV24_RS20710 () | 4386237..4387103 | + | 867 | WP_039023551.1 | DUF4942 domain-containing protein | - |
| HUV24_RS20715 () | 4387175..4387438 | + | 264 | WP_001143297.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| HUV24_RS20720 () | 4387435..4387761 | + | 327 | WP_000779482.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| HUV24_RS20725 () | 4388644..4390182 | + | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| HUV24_RS20730 () | 4390548..4391882 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| HUV24_RS20735 () | 4391962..4394109 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| HUV24_RS20740 () | 4394168..4395625 | + | 1458 | WP_021557456.1 | dipeptide/tripeptide permease DtpC | - |
| HUV24_RS20745 () | 4395862..4397379 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| HUV24_RS20750 () | 4397498..4397671 | - | 174 | WP_001672275.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| HUV24_RS20755 () | 4397699..4397995 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| HUV24_RS20760 () | 4398222..4398494 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| HUV24_RS20765 () | 4398506..4398736 | - | 231 | WP_021557455.1 | (4Fe-4S)-binding protein | - |
| HUV24_RS20770 () | 4398917..4400548 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| HUV24_RS20775 () | 4400545..4401264 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|