MGE detailed information
MGE type: Prophage MGE length: 56902 bp
Accession: NZ_AP023172 Location: 4426963..4483864 Organism: Rhodococcus qingshengii strain CS98 Replicon: chromosome
Accession: NZ_AP023172 Location: 4426963..4483864 Organism: Rhodococcus qingshengii strain CS98 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RQCS_RS20080 () | 4424005..4424682 | + | 678 | WP_007728823.1 | tellurium resistance protein TerA | - |
| RQCS_RS20085 () | 4424972..4425166 | + | 195 | WP_007728824.1 | hypothetical protein | - |
| RQCS_RS20090 () | 4426111..4426797 | + | 687 | WP_064689288.1 | hypothetical protein | - |
| RQCS_RS20100 () | 4426966..4427736 | + | 771 | Protein_3956 | Tyrosine recombinase XerC ; Integrase | Integrase |
| RQCS_RS20105 () | 4427902..4428813 | - | 912 | WP_143541184.1 | hypothetical protein | - |
| RQCS_RS20110 () | 4429207..4429518 | + | 312 | WP_064687450.1 | hypothetical protein | - |
| RQCS_RS20115 () | 4429529..4429825 | + | 297 | WP_064687451.1 | hypothetical protein | - |
| RQCS_RS20120 () | 4430215..4430808 | + | 594 | WP_156665913.1 | hypothetical protein | - |
| RQCS_RS20125 () | 4430839..4431015 | - | 177 | WP_156665914.1 | hypothetical protein | - |
| RQCS_RS20130 () | 4431832..4432047 | - | 216 | WP_064687453.1 | hypothetical protein | Antitoxin Detail |
| RQCS_RS20135 () | 4432050..4432904 | - | 855 | WP_064687454.1 | hypothetical protein | Toxin Detail |
| RQCS_RS20140 () | 4433340..4433843 | - | 504 | WP_064687455.1 | hypothetical protein | - |
| RQCS_RS20145 () | 4433840..4433998 | - | 159 | WP_156665915.1 | hypothetical protein | - |
| RQCS_RS20150 () | 4435078..4435326 | + | 249 | WP_156665916.1 | hypothetical protein | - |
| RQCS_RS20155 () | 4436923..4437318 | - | 396 | WP_064687457.1 | helix-turn-helix transcriptional regulator | - |
| RQCS_RS20160 () | 4438563..4439462 | - | 900 | WP_064687458.1 | hypothetical protein | - |
| RQCS_RS20165 () | 4439466..4440836 | - | 1371 | WP_064687459.1 | hypothetical protein | - |
| RQCS_RS20170 () | 4440833..4441156 | - | 324 | WP_064687460.1 | hypothetical protein | - |
| RQCS_RS20175 () | 4441366..4441695 | + | 330 | WP_064687461.1 | hypothetical protein | - |
| RQCS_RS20180 () | 4441888..4442397 | - | 510 | WP_064687462.1 | translation initiation factor IF-2 N-terminal domain-containing protein | - |
| RQCS_RS20185 () | 4442397..4443020 | - | 624 | WP_064687463.1 | hypothetical protein | - |
| RQCS_RS20190 () | 4443022..4444074 | - | 1053 | WP_064687464.1 | hypothetical protein | - |
| RQCS_RS20195 () | 4444107..4444508 | - | 402 | WP_064687465.1 | hypothetical protein | - |
| RQCS_RS20200 () | 4444537..4445187 | - | 651 | WP_064687466.1 | holin | - |
| RQCS_RS20205 () | 4445191..4446288 | - | 1098 | WP_064687467.1 | hypothetical protein | - |
| RQCS_RS20210 () | 4446324..4446917 | - | 594 | WP_064687468.1 | DUF2744 domain-containing protein | - |
| RQCS_RS20215 () | 4446920..4448593 | - | 1674 | WP_082931242.1 | hypothetical protein | - |
| RQCS_RS20220 () | 4448610..4449551 | - | 942 | WP_064687469.1 | hypothetical protein | - |
| RQCS_RS20225 () | 4449574..4454727 | - | 5154 | WP_064687470.1 | tape measure protein | - |
| RQCS_RS20230 () | 4454745..4455302 | - | 558 | WP_064687471.1 | hypothetical protein | - |
| RQCS_RS20235 () | 4455350..4455724 | - | 375 | WP_064687472.1 | hypothetical protein | - |
| RQCS_RS20240 () | 4455868..4456695 | - | 828 | WP_064687473.1 | hypothetical protein | - |
| RQCS_RS20245 () | 4456748..4457143 | - | 396 | WP_064687474.1 | hypothetical protein | - |
| RQCS_RS20250 () | 4457136..4457405 | - | 270 | WP_064443978.1 | hypothetical protein | - |
| RQCS_RS20255 () | 4457405..4457764 | - | 360 | WP_156665917.1 | hypothetical protein | - |
| RQCS_RS20260 () | 4457761..4458183 | - | 423 | WP_064443977.1 | hypothetical protein | - |
| RQCS_RS20265 () | 4458205..4458591 | - | 387 | WP_064687476.1 | hypothetical protein | - |
| RQCS_RS20270 () | 4458591..4459622 | - | 1032 | WP_064687477.1 | major capsid protein | - |
| RQCS_RS20275 () | 4459635..4460003 | - | 369 | WP_064687478.1 | hypothetical protein | - |
| RQCS_RS20280 () | 4460032..4460715 | - | 684 | WP_156665918.1 | hypothetical protein | - |
| RQCS_RS20285 () | 4460708..4460911 | - | 204 | WP_064687480.1 | hypothetical protein | - |
| RQCS_RS20290 () | 4460960..4461499 | - | 540 | WP_156665919.1 | hypothetical protein | - |
| RQCS_RS20295 () | 4461600..4463087 | - | 1488 | WP_156665920.1 | phage portal protein | - |
| RQCS_RS20300 () | 4463087..4464886 | - | 1800 | WP_082931243.1 | terminase | - |
| RQCS_RS20305 () | 4464876..4465241 | - | 366 | WP_054831800.1 | hypothetical protein | - |
| RQCS_RS20310 () | 4465388..4465696 | - | 309 | WP_082931244.1 | HNH endonuclease | - |
| RQCS_RS20315 () | 4465696..4465842 | - | 147 | WP_156665921.1 | hypothetical protein | - |
| RQCS_RS20320 () | 4465963..4466352 | - | 390 | WP_156665922.1 | hypothetical protein | - |
| RQCS_RS20325 () | 4466727..4466975 | + | 249 | WP_156665940.1 | DUF2510 domain-containing protein | - |
| RQCS_RS20330 () | 4467934..4468698 | - | 765 | WP_156665923.1 | hypothetical protein | - |
| RQCS_RS20335 () | 4468695..4469015 | - | 321 | WP_156665924.1 | hypothetical protein | - |
| RQCS_RS20340 () | 4470218..4470406 | + | 189 | WP_064443960.1 | hypothetical protein | - |
| RQCS_RS20345 () | 4470730..4471080 | - | 351 | WP_082920619.1 | hypothetical protein | - |
| RQCS_RS20350 () | 4471077..4471355 | - | 279 | WP_064443959.1 | hypothetical protein | - |
| RQCS_RS20355 () | 4471352..4471906 | - | 555 | WP_064687489.1 | 3'-5' exoribonuclease | - |
| RQCS_RS20360 () | 4471903..4472286 | - | 384 | WP_064687490.1 | hypothetical protein | - |
| RQCS_RS20365 () | 4472283..4472498 | - | 216 | WP_064443956.1 | hypothetical protein | - |
| RQCS_RS20370 () | 4472501..4472995 | - | 495 | WP_064443955.1 | hypothetical protein | - |
| RQCS_RS20375 () | 4472992..4473513 | - | 522 | WP_064687491.1 | hypothetical protein | - |
| RQCS_RS20380 () | 4473510..4474157 | - | 648 | WP_156665925.1 | hypothetical protein | - |
| RQCS_RS20385 () | 4474422..4474787 | - | 366 | WP_064443952.1 | hypothetical protein | - |
| RQCS_RS20390 () | 4474856..4475818 | - | 963 | WP_064687493.1 | recombinase RecT | - |
| RQCS_RS20395 () | 4475815..4476720 | - | 906 | WP_064687494.1 | YqaJ viral recombinase family protein | - |
| RQCS_RS20400 () | 4476717..4476908 | - | 192 | WP_064687495.1 | hypothetical protein | - |
| RQCS_RS20405 () | 4476905..4477222 | - | 318 | WP_064687496.1 | hypothetical protein | - |
| RQCS_RS20410 () | 4477219..4477977 | - | 759 | WP_064687497.1 | hypothetical protein | - |
| RQCS_RS20415 () | 4477974..4478168 | - | 195 | WP_064687498.1 | hypothetical protein | - |
| RQCS_RS20420 () | 4478165..4478482 | - | 318 | WP_156665926.1 | hypothetical protein | - |
| RQCS_RS20425 () | 4478479..4478850 | - | 372 | WP_156665927.1 | hypothetical protein | - |
| RQCS_RS20430 () | 4478969..4479145 | - | 177 | WP_156665928.1 | hypothetical protein | - |
| RQCS_RS20435 () | 4479142..4479393 | - | 252 | WP_064687501.1 | hypothetical protein | - |
| RQCS_RS20440 () | 4479390..4480199 | - | 810 | WP_064687502.1 | phage antirepressor KilAC domain-containing protein | - |
| RQCS_RS20445 () | 4480196..4481047 | - | 852 | WP_156665929.1 | hypothetical protein | - |
| RQCS_RS20450 () | 4481312..4481554 | - | 243 | WP_064443939.1 | helix-turn-helix domain-containing protein | - |
| RQCS_RS20455 () | 4481681..4482181 | + | 501 | WP_064687503.1 | hypothetical protein | - |
| RQCS_RS20460 () | 4482188..4482589 | + | 402 | WP_064443937.1 | ImmA/IrrE family metallo-endopeptidase | - |
| RQCS_RS20465 () | 4482623..4483864 | + | 1242 | WP_082931245.1 | Putative prophage phiRv2 integrase ; Integrase | Integrase |
| RQCS_RS20475 () | 4483988..4484953 | - | 966 | WP_064687504.1 | Ppx/GppA family phosphatase | - |
| RQCS_RS20480 () | 4484950..4485495 | - | 546 | WP_054827653.1 | DUF501 domain-containing protein | - |
| RQCS_RS20485 () | 4485492..4486103 | - | 612 | WP_063316805.1 | septum formation initiator family protein | - |
| RQCS_RS20490 () | 4486238..4487524 | - | 1287 | WP_064687505.1 | phosphopyruvate hydratase | - |
| RQCS_RS20495 () | 4487739..4488551 | - | 813 | WP_156665930.1 | lytic murein transglycosylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|