MGE detailed information
MGE type: Genomic_island MGE length: 38064 bp
Accession: NZ_AP023081 Location: 4900816..4938879 Organism: Pseudomonas solani strain Sm006 Replicon: chromosome
Accession: NZ_AP023081 Location: 4900816..4938879 Organism: Pseudomonas solani strain Sm006 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PSm6_RS22410 (PSm6_45050) | 4896554..4897225 | + | 672 | WP_265168280.1 | peptidase S8 and S53 subtilisin kexin sedolisin | - |
| PSm6_RS22415 | 4897218..4898506 | + | 1289 | Protein_4410 | tryptophan 7-halogenase | - |
| PSm6_RS22420 (PSm6_45080) | 4898590..4899405 | + | 816 | WP_265168281.1 | protein phosphatase 2C domain-containing protein | - |
| PSm6_RS22425 (PSm6_45090) | 4899410..4900246 | - | 837 | WP_265168282.1 | AraC family transcriptional regulator | - |
| PSm6_RS22430 (PSm6_45100) | 4900359..4900772 | - | 414 | WP_265168283.1 | lysozyme inhibitor LprI family protein | - |
| PSm6_RS22435 (PSm6_45110) | 4900816..4901640 | - | 825 | WP_265168284.1 | suppressor of fused domain protein | - |
| PSm6_RS22440 (PSm6_45120) | 4901810..4902358 | + | 549 | WP_265168285.1 | hypothetical protein | - |
| PSm6_RS22445 (PSm6_45130) | 4902371..4902901 | - | 531 | WP_265168286.1 | hypothetical protein | - |
| PSm6_RS22450 (PSm6_45140) | 4903004..4903462 | - | 459 | WP_037021380.1 | Rrf2 family transcriptional regulator | - |
| PSm6_RS22455 (PSm6_45150) | 4903626..4904516 | + | 891 | WP_265168287.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| PSm6_RS22460 | 4904531..4905208 | + | 678 | WP_265170556.1 | class I SAM-dependent methyltransferase | - |
| PSm6_RS22465 | 4905245..4905712 | - | 468 | Protein_4420 | GrpB family protein | - |
| PSm6_RS22470 (PSm6_45170) | 4905876..4906607 | - | 732 | WP_265168288.1 | hypothetical protein | - |
| PSm6_RS22475 (PSm6_45180) | 4906604..4907083 | - | 480 | WP_265168289.1 | hypothetical protein | - |
| PSm6_RS22480 (PSm6_45190) | 4907344..4907583 | - | 240 | WP_265168290.1 | hypothetical protein | - |
| PSm6_RS22485 (PSm6_45200) | 4907673..4907930 | - | 258 | WP_173180033.1 | hypothetical protein | - |
| PSm6_RS22490 | 4909154..4909303 | - | 150 | Protein_4425 | RHS repeat-associated core domain-containing protein | - |
| PSm6_RS22495 (PSm6_45230) | 4909573..4909974 | - | 402 | WP_165666555.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin Detail |
| PSm6_RS22500 (PSm6_45240) | 4909977..4910273 | - | 297 | WP_265170557.1 | type II toxin-antitoxin system MqsR family toxin | Toxin Detail |
| PSm6_RS22505 (PSm6_45250) | 4910347..4911300 | - | 954 | WP_265168291.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| PSm6_RS22510 (PSm6_45260) | 4911290..4912144 | - | 855 | WP_265168292.1 | hypothetical protein | - |
| PSm6_RS22515 (PSm6_45270) | 4912147..4912896 | - | 750 | WP_265168293.1 | IS21 family transposase IS408 | Transposase |
| PSm6_RS22520 (PSm6_45280) | 4912889..4914433 | - | 1545 | WP_265168294.1 | IS21 family transposase ISSpu5 | Transposase |
| PSm6_RS22525 (PSm6_45290) | 4914701..4915003 | - | 303 | WP_265168295.1 | hypothetical protein | - |
| PSm6_RS22530 (PSm6_45310) | 4916315..4916944 | - | 630 | WP_265168296.1 | hypothetical protein | - |
| PSm6_RS22535 | 4917173..4917361 | - | 189 | WP_265168297.1 | hypothetical protein | - |
| PSm6_RS22540 (PSm6_45320) | 4917446..4918504 | - | 1059 | WP_265168298.1 | hypothetical protein | - |
| PSm6_RS22545 (PSm6_45330) | 4918541..4919239 | - | 699 | WP_265168299.1 | hypothetical protein | - |
| PSm6_RS22550 (PSm6_45340) | 4919326..4920051 | - | 726 | WP_265168300.1 | CBASS effector endonuclease NucC | - |
| PSm6_RS22555 (PSm6_45350) | 4920134..4921066 | - | 933 | WP_265168301.1 | AAA family ATPase | - |
| PSm6_RS22560 (PSm6_45360) | 4921066..4921581 | - | 516 | WP_265168302.1 | hypothetical protein | - |
| PSm6_RS22565 (PSm6_45370) | 4921589..4922554 | - | 966 | WP_265168303.1 | CBASS oligonucleotide cyclase | - |
| PSm6_RS22570 (PSm6_45380) | 4922742..4923065 | + | 324 | WP_160347873.1 | helix-turn-helix transcriptional regulator | - |
| PSm6_RS22575 (PSm6_45390) | 4923068..4923958 | + | 891 | WP_265168304.1 | ImmA/IrrE family metallo-endopeptidase | - |
| PSm6_RS22580 (PSm6_45400) | 4924279..4925235 | - | 957 | WP_265168305.1 | DUF3322 domain-containing protein | - |
| PSm6_RS22585 (PSm6_45410) | 4925225..4928641 | - | 3417 | WP_265168306.1 | SbcC/MukB-like Walker B domain-containing protein | - |
| PSm6_RS22590 (PSm6_45420) | 4928628..4929233 | - | 606 | WP_265168307.1 | DUF4194 domain-containing protein | - |
| PSm6_RS22595 (PSm6_45430) | 4929230..4930636 | - | 1407 | WP_265168308.1 | DUF5716 family protein | - |
| PSm6_RS22600 (PSm6_45440) | 4932044..4932595 | - | 552 | WP_265168309.1 | hypothetical protein | - |
| PSm6_RS22605 (PSm6_45450) | 4932608..4935247 | - | 2640 | WP_265168310.1 | RHS repeat-associated core domain-containing protein | - |
| PSm6_RS22610 (PSm6_45460) | 4935267..4935776 | - | 510 | WP_265168311.1 | RHS repeat protein | - |
| PSm6_RS22615 (PSm6_45470) | 4937581..4938000 | + | 420 | WP_265168312.1 | hypothetical protein | - |
| PSm6_RS22620 (PSm6_45480) | 4938121..4938507 | + | 387 | WP_265168313.1 | hypothetical protein | - |
| PSm6_RS22625 (PSm6_45490) | 4938517..4938879 | + | 363 | WP_265168314.1 | DUF4440 domain-containing protein | - |
| PSm6_RS22630 (PSm6_45500) | 4938935..4939660 | - | 726 | WP_265168316.1 | RNA methyltransferase | - |
| PSm6_RS22635 (PSm6_45510) | 4939672..4941309 | - | 1638 | WP_265168318.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| PSm6_RS22640 (PSm6_45520) | 4941574..4942194 | + | 621 | WP_265168319.1 | 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE | - |
| PSm6_RS22645 (PSm6_45530) | 4942239..4943732 | - | 1494 | WP_265168320.1 | aldehyde dehydrogenase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|