MGE detailed information
MGE type: Conjugative plasmid MGE length: 83276 bp
Accession: NZ_AP022813 Location: 1..83276 Organism: Escherichia coli strain JE86-ST02 Replicon: plasmid JE86-ST02_p2
Accession: NZ_AP022813 Location: 1..83276 Organism: Escherichia coli strain JE86-ST02 Replicon: plasmid JE86-ST02_p2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JLZ98_RS26750 () | 1..879 | + | 879 | WP_000729439.1 | incFII family plasmid replication initiator RepA | - |
| JLZ98_RS26755 () | 1778..2062 | + | 285 | WP_001178087.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| JLZ98_RS26760 () | 2062..2337 | + | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JLZ98_RS26765 () | 2443..2724 | + | 282 | WP_001105066.1 | hypothetical protein | - |
| JLZ98_RS26770 () | 2915..3181 | - | 267 | WP_000627831.1 | hypothetical protein | - |
| JLZ98_RS26775 () | 3319..3921 | - | 603 | WP_000517694.1 | hypothetical protein | - |
| JLZ98_RS26780 () | 4275..5621 | + | 1347 | WP_103927857.1 | hypothetical protein | - |
| JLZ98_RS26785 () | 6179..6481 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| JLZ98_RS26790 () | 6478..7104 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| JLZ98_RS26795 () | 7308..8579 | - | 1272 | WP_000457510.1 | Y-family DNA polymerase | - |
| JLZ98_RS26800 () | 8579..9016 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| JLZ98_RS26805 () | 9013..9261 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| JLZ98_RS26810 () | 9680..10582 | + | 903 | WP_001330417.1 | DUF1281 domain-containing protein | - |
| JLZ98_RS26815 () | 10579..10891 | + | 313 | Protein_13 | hypothetical protein | - |
| JLZ98_RS26820 () | 10967..11650 | + | 684 | WP_000086137.1 | DNA methylase | - |
| JLZ98_RS26825 () | 11651..11872 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| JLZ98_RS26830 () | 11886..12320 | + | 435 | WP_000274421.1 | DUF1380 family protein | - |
| JLZ98_RS26835 () | 12365..13135 | + | 771 | WP_001006204.1 | hypothetical protein | - |
| JLZ98_RS26840 () | 13673..13975 | + | 303 | WP_072105978.1 | antirestriction protein | - |
| JLZ98_RS26845 () | 14022..14444 | + | 423 | WP_103927856.1 | DUF1380 family protein | - |
| JLZ98_RS26850 () | 14441..14632 | + | 192 | WP_001493747.1 | hypothetical protein | - |
| JLZ98_RS26855 () | 14646..15017 | + | 372 | WP_072105516.1 | hypothetical protein | - |
| JLZ98_RS26860 () | 15401..15928 | + | 528 | WP_103927855.1 | single-stranded DNA-binding protein | - |
| JLZ98_RS26865 () | 15986..16219 | + | 234 | WP_000006024.1 | DUF905 domain-containing protein | - |
| JLZ98_RS26870 () | 16278..18236 | + | 1959 | WP_001401579.1 | ParB/RepB/Spo0J family partition protein | - |
| JLZ98_RS26875 () | 18291..18725 | + | 435 | WP_001578018.1 | conjugation system SOS inhibitor PsiB | - |
| JLZ98_RS26880 () | 18722..19441 | + | 720 | WP_103927854.1 | plasmid SOS inhibition protein A | - |
| JLZ98_RS26885 () | 19438..20034 | + | 597 | WP_000977998.1 | hypothetical protein | - |
| JLZ98_RS26890 () | 20496..20996 | + | 501 | WP_014065718.1 | antirestriction protein ArdA | - |
| JLZ98_RS26895 () | 21729..22163 | + | 435 | WP_000218862.1 | hypothetical protein | - |
| JLZ98_RS26900 () | 22255..22521 | + | 267 | WP_001247860.1 | hypothetical protein | - |
| JLZ98_RS26905 () | 22698..23087 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| JLZ98_RS26910 () | 23084..23974 | + | 891 | WP_000038332.1 | Recombination-promoting nuclease RpnA | VF |
| JLZ98_RS26915 () | 23974..24219 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| JLZ98_RS26920 () | 24250..24501 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| JLZ98_RS26925 () | 24535..24732 | - | 198 | WP_001161106.1 | hypothetical protein | - |
| JLZ98_RS26930 () | 25081..25929 | + | 849 | WP_001077014.1 | DUF4942 domain-containing protein | - |
| JLZ98_RS26935 () | 26015..26350 | - | 336 | WP_000157087.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| JLZ98_RS26940 () | 26583..26915 | + | 333 | WP_001291058.1 | hypothetical protein | - |
| JLZ98_RS26945 () | 26927..29638 | + | 2712 | WP_000991381.1 | Protein TraI | Relaxase |
| JLZ98_RS26950 () | 29706..30137 | + | 432 | WP_072264695.1 | tolA family protein | - |
| JLZ98_RS26955 () | 30235..30465 | - | 231 | WP_065406859.1 | hypothetical protein | - |
| JLZ98_RS26960 () | 30932..33235 | - | 2304 | WP_000077664.1 | TraM recognition domain-containing protein | - |
| JLZ98_RS26965 () | 33216..34340 | - | 1125 | WP_000152386.1 | DsbC family protein | - |
| JLZ98_RS26970 () | 34337..35644 | - | 1308 | WP_032291128.1 | IncI1-type conjugal transfer protein TrbA | - |
| JLZ98_RS26975 () | 36729..36980 | + | 252 | WP_001081067.1 | hypothetical protein | - |
| JLZ98_RS26980 () | 37043..37219 | - | 177 | WP_170975645.1 | hypothetical protein | - |
| JLZ98_RS26985 () | 37369..37836 | - | 468 | WP_000598962.1 | thermonuclease family protein | - |
| JLZ98_RS26990 () | 37995..38618 | + | 624 | WP_001155252.1 | DNA-binding protein | - |
| JLZ98_RS26995 () | 38816..39031 | - | 216 | WP_000266543.1 | hypothetical protein | - |
| JLZ98_RS27000 () | 39035..39403 | - | 369 | WP_001345852.1 | hypothetical protein | - |
| JLZ98_RS27005 () | 39415..39606 | - | 192 | WP_000751583.1 | hypothetical protein | - |
| JLZ98_RS27010 () | 39694..39936 | - | 243 | WP_000650923.1 | hypothetical protein | - |
| JLZ98_RS27015 () | 40266..40418 | + | 153 | WP_001335079.1 | Hok/Gef family protein | - |
| JLZ98_RS27020 () | 40556..42142 | - | 1587 | WP_000004564.1 | TnsA endonuclease N-terminal domain-containing protein | - |
| JLZ98_RS27025 () | 42416..43069 | - | 654 | WP_001401768.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| JLZ98_RS27030 () | 43157..45322 | - | 2166 | WP_000691808.1 | DotA/TraY family protein | - |
| JLZ98_RS27035 () | 45397..45966 | - | 570 | WP_000650752.1 | conjugal transfer protein TraX | - |
| JLZ98_RS27040 () | 45963..47168 | - | 1206 | WP_001189548.1 | conjugal transfer protein TraW | - |
| JLZ98_RS27045 () | 47126..47746 | - | 621 | WP_000286854.1 | hypothetical protein | - |
| JLZ98_RS27050 () | 47746..50790 | - | 3045 | WP_103927858.1 | conjugal transfer protein | - |
| JLZ98_RS27055 () | 51085..51903 | - | 819 | WP_000753550.1 | hypothetical protein | - |
| JLZ98_RS27060 () | 51818..52069 | - | 252 | WP_001277573.1 | hypothetical protein | - |
| JLZ98_RS27065 () | 52126..52524 | - | 399 | WP_000088813.1 | hypothetical protein | - |
| JLZ98_RS27070 () | 52571..53098 | - | 528 | WP_001407937.1 | conjugal transfer protein TraQ | - |
| JLZ98_RS27075 () | 53098..53811 | - | 714 | WP_000787003.1 | conjugal transfer protein TraP | - |
| JLZ98_RS27080 () | 53808..55139 | - | 1332 | WP_001288254.1 | conjugal transfer protein TraO | - |
| JLZ98_RS27085 () | 55143..56117 | - | 975 | WP_000547383.1 | hypothetical protein | VF |
| JLZ98_RS27090 () | 56128..56823 | - | 696 | WP_001287545.1 | DotI/IcmL family type IV secretion protein | - |
| JLZ98_RS27095 () | 56835..57185 | - | 351 | WP_001056367.1 | hypothetical protein | - |
| JLZ98_RS27100 () | 57202..61263 | - | 4062 | WP_000842447.1 | DNA primase | - |
| JLZ98_RS27105 () | 61327..61617 | - | 291 | WP_000817801.1 | IcmT/TraK family protein | - |
| JLZ98_RS27110 () | 61614..62762 | - | 1149 | WP_000775210.1 | putative protein YggR | VF |
| JLZ98_RS27115 () | 62746..63582 | - | 837 | WP_000745049.1 | hypothetical protein | VF |
| JLZ98_RS27120 () | 63579..64037 | - | 459 | WP_001170111.1 | DotD/TraH family lipoprotein | - |
| JLZ98_RS27125 () | 64141..65343 | - | 1203 | WP_000979993.1 | conjugal transfer protein TraF | - |
| JLZ98_RS27130 () | 65445..66266 | - | 822 | WP_000845373.1 | hypothetical protein | - |
| JLZ98_RS27135 () | 66739..68100 | - | 1362 | WP_001168171.1 | hypothetical protein | VF |
| JLZ98_RS27140 () | 68118..68744 | - | 627 | WP_000939244.1 | prepilin peptidase | - |
| JLZ98_RS27145 () | 68760..69245 | - | 486 | WP_001080767.1 | hypothetical protein | VF |
| JLZ98_RS27150 () | 69290..69826 | - | 537 | WP_000111534.1 | hypothetical protein | VF |
| JLZ98_RS27155 () | 69888..70982 | - | 1095 | WP_000697158.1 | type II secretion system F family protein | - |
| JLZ98_RS27160 () | 70984..72492 | - | 1509 | WP_000880807.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| JLZ98_RS27165 () | 72595..73053 | - | 459 | WP_000095885.1 | hypothetical protein | VF |
| JLZ98_RS27170 () | 73043..74338 | - | 1296 | WP_000129883.1 | type 4b pilus protein PilO2 | - |
| JLZ98_RS27175 () | 74359..75978 | - | 1620 | WP_001035562.1 | Outer membrane lipoprotein BfpB | VF |
| JLZ98_RS27180 () | 76010..76447 | - | 438 | WP_000539952.1 | hypothetical protein | VF |
| JLZ98_RS27185 () | 76451..77521 | - | 1071 | WP_000730428.1 | hypothetical protein | VF |
| JLZ98_RS27190 () | 77748..78083 | - | 336 | WP_001335624.1 | hypothetical protein | - |
| JLZ98_RS27195 () | 78199..78516 | - | 318 | WP_001330559.1 | PilI type IV pilus biogenesis protein | - |
| JLZ98_RS27200 () | 78522..80216 | - | 1695 | WP_000482665.1 | flotillin family protein | - |
| JLZ98_RS27205 () | 80243..80863 | - | 621 | WP_000176497.1 | DUF1449 family protein | - |
| JLZ98_RS27210 () | 81130..81792 | - | 663 | WP_000154141.1 | hypothetical protein | - |
| JLZ98_RS27215 () | 81933..82574 | - | 642 | WP_000335849.1 | transcription termination factor NusG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|