NZ_AP0226402110896..2366450

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 255555 bp
Accession: NZ_AP022640        Location: 2110896..2366450         Organism: Bradyrhizobium diazoefficiens strain HF08       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
H7K72_RS09675 () 2106585..2107445 + 861 WP_011084696.1 carbohydrate ABC transporter permease -
H7K72_RS09680 () 2107442..2108383 + 942 Protein_1914 ribokinase -
H7K72_RS09685 () 2108380..2109150 + 771 WP_011084698.1 SDR family oxidoreductase -
H7K72_RS09690 () 2109143..2109970 + 828 WP_011084699.1 HAD-IIA family hydrolase -
H7K72_RS09695 () 2109970..2111082 + 1113 WP_182869648.1 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC -
H7K72_RS09700 () 2111036..2112895 + 1860 WP_011084701.1 sigma-54-dependent Fis family transcriptional regulator -
H7K72_RS09705 () 2113136..2113945 - 810 WP_018270204.1 IS21-like element ISBj11 family helper ATPase IstB -
H7K72_RS09710 () 2113942..2115480 - 1539 WP_011084704.1 IS21 family transposase -
H7K72_RS09715 () 2116407..2116640 + 234 WP_018648284.1 DUF2188 domain-containing protein -
H7K72_RS09720 () 2116730..2117215 + 486 Protein_1922 IS6 family transposase -
H7K72_RS09725 () 2117293..2117847 + 555 Protein_1923 peptide transporter -
H7K72_RS09730 () 2118161..2118729 + 569 Protein_1924 transposase -
H7K72_RS09735 () 2119147..2120892 + 1746 WP_026312873.1 E3 ubiquitin--protein ligase -
H7K72_RS09740 () 2120949..2121119 + 171 WP_018648285.1 hypothetical protein -
H7K72_RS09745 () 2121355..2121537 - 183 Protein_1927 IS6 family transposase -
H7K72_RS09750 () 2121824..2122411 - 588 WP_018648286.1 GNAT family N-acetyltransferase -
H7K72_RS09755 () 2122661..2123395 - 735 Protein_1929 IS6 family transposase -
H7K72_RS09760 () 2125634..2126698 + 1065 WP_011084514.1 IS630 family transposase -
H7K72_RS09765 () 2126716..2127552 + 837 WP_011084715.1 hypothetical protein -
H7K72_RS09770 () 2127973..2128733 + 761 WP_182869649.1 IS5 family transposase -
H7K72_RS09775 () 2129121..2130596 + 1476 WP_011084718.1 group II intron reverse transcriptase/maturase -
H7K72_RS09780 () 2130720..2132070 + 1351 Protein_1934 IS701-like element ISBj6 family transposase -
H7K72_RS09785 () 2132487..2132819 + 333 WP_080668322.1 hypothetical protein -
H7K72_RS09790 () 2132957..2133661 - 705 WP_011084720.1 hypothetical protein -
H7K72_RS09795 () 2133773..2134204 - 432 WP_018648597.1 hypothetical protein -
H7K72_RS09800 () 2134251..2134757 - 507 WP_080668323.1 hypothetical protein -
H7K72_RS09805 () 2134805..2138590 - 3786 WP_018648595.1 AAA family ATPase -
H7K72_RS09810 () 2138593..2139345 - 753 Protein_1940 exonuclease SbcCD subunit D C-terminal domain-containing protein -
H7K72_RS09815 () 2139439..2140568 + 1130 WP_109866565.1 IS3-like element ISRj2 family transposase -
H7K72_RS09820 () 2140675..2141193 - 519 Protein_1942 exonuclease subunit SbcD -
H7K72_RS09825 () 2141202..2143310 - 2109 WP_011084726.1 DUF87 domain-containing protein -
H7K72_RS09830 () 2143318..2144622 - 1305 WP_011084727.1 SIR2 family protein -
H7K72_RS09835 () 2144700..2145620 - 921 WP_018647871.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein Toxin Detail
H7K72_RS09840 () 2145610..2146230 - 621 WP_026312796.1 type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein Antitoxin Detail
H7K72_RS09845 () 2146444..2147190 - 747 WP_018647872.1 DCL family protein -
H7K72_RS09850 () 2147165..2149675 - 2511 WP_011084731.1 AAA family ATPase -
H7K72_RS09855 () 2149638..2149865 - 228 WP_131234255.1 hypothetical protein -
H7K72_RS09860 () 2150111..2151307 + 1197 WP_011084732.1 hypothetical protein -
H7K72_RS09865 () 2151481..2153604 + 2124 WP_028176021.1 ParB/RepB/Spo0J family partition protein -
H7K72_RS09870 () 2153703..2154116 + 414 WP_028176020.1 hypothetical protein -
H7K72_RS09875 () 2154390..2158713 + 4324 Protein_1953 strawberry notch family protein -
H7K72_RS09880 () 2158713..2159780 + 1068 WP_011084736.1 toprim domain-containing protein -
H7K72_RS09885 () 2160111..2161037 + 927 WP_011084737.1 DUF2493 domain-containing protein -
H7K72_RS09890 () 2161693..2162525 - 833 Protein_1956 IS21-like element helper ATPase IstB -
H7K72_RS09895 () 2162617..2163582 - 966 WP_011084741.1 IS21 family transposase -
H7K72_RS09900 () 2163830..2165139 - 1310 Protein_1958 MobA/MobL family protein -
H7K72_RS09905 () 2165303..2165443 + 141 WP_156149859.1 hypothetical protein -
H7K72_RS09910 () 2165478..2167913 - 2436 WP_080584299.1 porin family protein -
H7K72_RS09915 () 2168832..2169272 + 441 WP_026312808.1 hypothetical protein -
H7K72_RS09920 () 2169308..2169991 - 684 Protein_1962 class I SAM-dependent methyltransferase -
H7K72_RS09925 () 2170438..2170596 + 159 WP_182869857.1 cold shock domain-containing protein -
H7K72_RS09930 () 2170634..2171763 + 1130 WP_085967575.1 IS3-like element ISRj2 family transposase -
H7K72_RS09935 () 2173114..2173440 + 327 WP_182869651.1 DUF736 domain-containing protein -
H7K72_RS09940 () 2173549..2173965 - 417 WP_026312806.1 hypothetical protein -
H7K72_RS09945 () 2174125..2174884 + 760 Protein_1967 IS5 family transposase -
H7K72_RS09950 () 2176067..2178520 + 2454 WP_182869653.1 LPS-assembly protein LptD -
H7K72_RS09955 () 2178538..2178729 + 192 WP_014497849.1 hypothetical protein -
H7K72_RS09960 () 2179230..2180550 + 1321 Protein_1970 group II intron reverse transcriptase/maturase -
H7K72_RS09965 () 2181363..2182154 + 792 WP_018647915.1 hypothetical protein -
H7K72_RS09970 () 2182850..2183056 - 207 Protein_1972 IS256 family transposase -
H7K72_RS09975 () 2183129..2183302 + 174 WP_162131359.1 hypothetical protein -
H7K72_RS09980 () 2183419..2183559 + 141 WP_154694111.1 hypothetical protein -
H7K72_RS09985 () 2183987..2184567 + 581 Protein_1975 IS6 family transposase -
H7K72_RS09990 () 2185344..2187662 + 2319 WP_011084771.1 S9 family peptidase -
H7K72_RS09995 () 2187868..2188167 + 300 WP_011084772.1 transposase -
H7K72_RS10000 () 2188248..2188403 + 156 WP_014497843.1 transposase -
H7K72_RS10005 () 2188780..2190114 - 1335 WP_041960889.1 IS5-like element ISBj2_B family transposase -
H7K72_RS10010 () 2190498..2190725 + 228 WP_011084776.1 hypothetical protein -
H7K72_RS10015 () 2191039..2193018 - 1980 WP_011084777.1 RiPP maturation radical SAM C-methyltransferase -
H7K72_RS10020 () 2193719..2194111 - 393 WP_011084778.1 hypothetical protein -
H7K72_RS10025 () 2194158..2194625 - 468 WP_026312699.1 hypothetical protein -
H7K72_RS10030 () 2195342..2195707 - 366 WP_011084781.1 Nif11-like leader peptide family natural product precursor -
H7K72_RS10035 () 2195921..2196915 + 995 Protein_1985 IS481 family transposase -
H7K72_RS10040 () 2197167..2198486 - 1320 WP_011084785.1 type II toxin-antitoxin system HipA family toxin -
H7K72_RS10045 () 2198486..2198737 - 252 WP_011084786.1 helix-turn-helix transcriptional regulator -
H7K72_RS10050 () 2199182..2200737 + 1556 Protein_1988 hypothetical protein -
H7K72_RS10055 () 2200727..2201365 + 639 WP_011084789.1 DUF4194 domain-containing protein -
H7K72_RS10060 () 2201362..2204796 + 3435 WP_018647407.1 hypothetical protein -
H7K72_RS10065 () 2204799..2205968 + 1170 WP_011084791.1 hypothetical protein -
H7K72_RS10070 () 2206456..2206773 + 318 WP_011084792.1 hypothetical protein -
H7K72_RS10075 () 2207491..2209023 + 1533 WP_011084793.1 polygalacturonase -
H7K72_RS10080 () 2209241..2210281 + 1041 WP_011084794.1 pectinesterase -
H7K72_RS10085 () 2210986..2211401 + 416 Protein_1995 nucleotidyl transferase AbiEii/AbiGii toxin family protein -
H7K72_RS10090 () 2212409..2213218 - 810 WP_018270204.1 IS21-like element ISBj11 family helper ATPase IstB -
H7K72_RS10095 () 2213215..2214765 - 1551 WP_011084518.1 IS21-like element ISBj11 family transposase -
H7K72_RS10100 () 2215103..2216047 + 945 WP_018647405.1 hypothetical protein -
H7K72_RS10105 () 2218030..2219376 - 1347 WP_011084757.1 IS5-like element ISBj5_B family transposase -
H7K72_RS10110 () 2219794..2220429 + 636 WP_014497829.1 hypothetical protein -
H7K72_RS10115 () 2220437..2220817 - 381 WP_011084799.1 transposase -
H7K72_RS10120 () 2220949..2222619 - 1671 WP_011084800.1 carbohydrate porin -
H7K72_RS10125 () 2223064..2223420 - 357 WP_161966254.1 hypothetical protein -
H7K72_RS10130 () 2223834..2224352 + 519 WP_011084803.1 hypothetical protein -
H7K72_RS10135 () 2224761..2226098 - 1338 WP_011084804.1 oxygen-independent coproporphyrinogen III oxidase -
H7K72_RS10140 () 2227741..2228457 - 717 WP_011084806.1 sulfite exporter TauE/SafE family protein -
H7K72_RS10145 () 2229715..2229840 + 126 WP_108914088.1 hypothetical protein -
H7K72_RS10150 () 2230188..2230913 - 726 WP_014497822.1 porin family protein -
H7K72_RS10155 () 2231736..2231981 - 246 WP_011084811.1 hypothetical protein -
H7K72_RS10160 () 2232945..2233307 - 363 WP_014497821.1 hypothetical protein -
H7K72_RS10165 () 2234736..2235362 - 627 WP_071916446.1 ABC transporter substrate-binding protein -
H7K72_RS10170 () 2235436..2235834 - 399 WP_014497820.1 ABC transporter substrate-binding protein -
H7K72_RS10175 () 2236151..2236828 - 678 WP_071917715.1 MerR family transcriptional regulator -
H7K72_RS10180 () 2236987..2237196 - 210 WP_014497819.1 hypothetical protein -
H7K72_RS10185 () 2237783..2238775 - 993 WP_011084818.1 transcriptional regulator NodD2 -
H7K72_RS10190 () 2239409..2240353 - 945 WP_011084820.1 transcriptional regulator NodD1 -
H7K72_RS10195 () 2241147..2241779 + 633 WP_011084822.1 NodA family N-acyltransferase -
H7K72_RS10200 () 2241776..2242435 + 660 WP_011084823.1 chitooligosaccharide deacetylase NodB -
H7K72_RS10205 () 2242450..2243907 + 1458 WP_011084824.1 chitooligosaccharide synthase NodC -
H7K72_RS10210 () 2243834..2244463 + 630 WP_014497813.1 nodulation S family protein -
H7K72_RS10215 () 2244477..2246186 + 1710 WP_014497812.1 nodulation protein NodU -
H7K72_RS10220 () 2246188..2247108 + 921 WP_011084827.1 nodulation factor ABC transporter ATP-binding protein NodI -
H7K72_RS10225 () 2247112..2247900 + 789 WP_011084828.1 ABC transporter permease -
H7K72_RS10230 () 2248156..2248539 + 384 WP_162494058.1 hypothetical protein -
H7K72_RS10235 () 2248536..2250182 + 1647 WP_011084831.1 nodulation protein NolO -
H7K72_RS10240 () 2250474..2251460 + 987 WP_026312623.1 nodulation protein NodZ -
H7K72_RS10245 () 2252189..2253025 + 837 WP_011084833.1 SDR family oxidoreductase -
H7K72_RS10250 () 2253209..2255026 + 1818 WP_182869655.1 nif-specific transcriptional activator NifA -
H7K72_RS10255 () 2255544..2256410 + 867 WP_011084835.1 electron transfer flavoprotein subunit beta/FixA family protein -
H7K72_RS10260 () 2257550..2258773 + 1224 WP_011084838.1 GFA family protein -
H7K72_RS10265 () 2258758..2259435 + 678 WP_014497804.1 2OG-Fe(II) oxygenase -
H7K72_RS10270 () 2259978..2260445 - 468 WP_018647484.1 hypothetical protein -
H7K72_RS10275 () 2260915..2262225 - 1311 WP_011084841.1 hypothetical protein -
H7K72_RS10280 () 2262253..2263032 - 780 WP_011084842.1 hypothetical protein -
H7K72_RS10285 () 2263029..2263289 - 261 WP_133415003.1 hypothetical protein -
H7K72_RS10290 () 2264162..2264395 - 234 WP_011084844.1 hypothetical protein -
H7K72_RS10295 () 2264587..2265600 - 1014 WP_011084845.1 anthranilate phosphoribosyltransferase -
H7K72_RS10300 () 2266797..2267030 + 234 WP_014497799.1 hypothetical protein -
H7K72_RS10305 () 2268575..2269783 + 1209 WP_197535742.1 group II intron reverse transcriptase/maturase -
H7K72_RS10310 () 2269960..2271064 + 1105 Protein_2040 IS3 family transposase -
H7K72_RS10315 () 2271154..2272199 + 1046 Protein_2041 IS110 family transposase -
H7K72_RS10320 () 2274311..2275207 + 897 WP_011084854.1 YopT-type cysteine protease domain-containing protein -
H7K72_RS10325 () 2276447..2278087 - 1641 WP_011084855.1 chaperonin GroEL -
H7K72_RS10330 () 2278170..2278484 - 315 WP_011084856.1 co-chaperone GroES -
H7K72_RS10335 () 2279268..2280028 + 761 WP_085971921.1 IS5-like element ISBj2 family transposase -
H7K72_RS10340 () 2280270..2280917 + 648 WP_011084858.1 FkbM family methyltransferase -
H7K72_RS10345 () 2281740..2282906 - 1167 WP_014497789.1 flavin-dependent monooxygenase -
H7K72_RS10350 () 2284801..2285544 - 744 WP_026312601.1 carbonic anhydrase -
H7K72_RS10355 () 2285553..2286341 - 789 WP_011084862.1 thermonuclease family protein -
H7K72_RS10360 () 2287401..2288228 - 828 WP_018646917.1 hypothetical protein -
H7K72_RS10365 () 2288472..2288762 - 291 WP_131234261.1 hypothetical protein -
H7K72_RS10370 () 2289417..2291762 + 2346 WP_011084864.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
H7K72_RS10375 () 2293792..2293998 + 207 WP_026312600.1 hypothetical protein -
H7K72_RS10380 () 2294701..2295573 + 873 WP_197535737.1 glycine amidinotransferase -
H7K72_RS10385 () 2298724..2299806 + 1083 Protein_2055 sulfotransferase -
H7K72_RS10390 () 2301117..2302181 + 1065 WP_011084514.1 IS630 family transposase -
H7K72_RS10395 () 2302673..2305079 + 2407 Protein_2057 2-aminoethylphosphonate--pyruvate transaminase -
H7K72_RS10400 () 2305111..2306169 + 1059 WP_011084875.1 fatty acid desaturase family protein -
H7K72_RS10405 () 2306166..2306981 + 816 WP_011084876.1 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein -
H7K72_RS10410 () 2307112..2308014 + 903 WP_014497774.1 DMT family transporter -
H7K72_RS10415 () 2308011..2309297 + 1287 WP_011084878.1 ATP-grasp domain-containing protein -
H7K72_RS10420 () 2309297..2310634 + 1338 WP_011084879.1 glutamine synthetase -
H7K72_RS10425 () 2310792..2312489 - 1698 Protein_2063 outer membrane beta-barrel protein -
H7K72_RS10430 () 2313607..2316417 - 2811 WP_011084882.1 hypothetical protein -
H7K72_RS10435 () 2316746..2317033 + 288 WP_011084883.1 transposase -
H7K72_RS10440 () 2317030..2317503 + 474 WP_011084884.1 hypothetical protein -
H7K72_RS10445 () 2318174..2318770 - 597 WP_014497769.1 aminodeoxychorismate/anthranilate synthase component II -
H7K72_RS10450 () 2318767..2320161 - 1395 WP_028144144.1 aminodeoxychorismate synthase component I -
H7K72_RS10455 () 2320315..2320632 - 318 WP_011084888.1 Dabb family protein -
H7K72_RS10460 () 2320768..2321403 - 636 WP_011084889.1 GntR family transcriptional regulator -
H7K72_RS10465 () 2321518..2322513 + 996 WP_011084890.1 biotin synthase BioB -
H7K72_RS10470 () 2322563..2322916 + 354 WP_011084891.1 aspartate 1-decarboxylase -
H7K72_RS10475 () 2322993..2324147 + 1155 WP_011084892.1 8-amino-7-oxononanoate synthase -
H7K72_RS10480 () 2324144..2324779 + 636 WP_011084893.1 dethiobiotin synthase -
H7K72_RS10485 () 2324776..2326041 + 1266 WP_011084894.1 adenosylmethionine--8-amino-7-oxononanoate transaminase -
H7K72_RS10490 () 2327288..2328166 + 879 WP_028153345.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
H7K72_RS10495 () 2328170..2329021 + 852 WP_011084897.1 pantoate--beta-alanine ligase -
H7K72_RS10500 () 2329034..2329393 + 360 WP_011084898.1 hypothetical protein -
H7K72_RS10505 () 2330062..2330262 + 201 WP_014497761.1 hypothetical protein -
H7K72_RS10510 () 2330606..2330809 - 204 WP_014497760.1 hypothetical protein -
H7K72_RS10515 () 2331206..2331484 + 279 WP_011084900.1 hypothetical protein -
H7K72_RS10520 () 2332217..2332603 + 387 WP_011084901.1 ectoine synthase -
H7K72_RS10530 () 2333142..2343080 + 9939 WP_162494198.1 amino acid adenylation domain-containing protein -
H7K72_RS10535 () 2344703..2345386 - 684 WP_026312933.1 helix-turn-helix domain-containing protein -
H7K72_RS10540 () 2345924..2346190 + 267 WP_018648598.1 DUF3551 domain-containing protein -
H7K72_RS10545 () 2346638..2346868 - 231 WP_011084907.1 MarR family winged helix-turn-helix transcriptional regulator -
H7K72_RS10550 () 2347293..2347667 + 375 WP_014497752.1 type II toxin-antitoxin system RelE/ParE family toxin -
H7K72_RS10555 () 2347664..2347984 + 321 WP_011084909.1 helix-turn-helix domain-containing protein -
H7K72_RS10560 () 2347997..2349121 + 1125 WP_011084910.1 DUF3800 domain-containing protein -
H7K72_RS10570 () 2350870..2351439 + 570 WP_011084912.1 hypothetical protein -
H7K72_RS10575 () 2351485..2352015 + 531 WP_011084913.1 gamma-glutamylcyclotransferase -
H7K72_RS10580 () 2352310..2352516 - 207 WP_011084914.1 cold-shock protein -
H7K72_RS10585 () 2353773..2354291 + 519 WP_011084916.1 hypothetical protein -
H7K72_RS10590 () 2354381..2354701 + 321 Protein_2095 matrixin family metalloprotease -
H7K72_RS10595 () 2354820..2355374 + 555 WP_161966513.1 serine protease -
H7K72_RS10600 () 2355371..2356153 + 783 WP_011084918.1 hypothetical protein -
H7K72_RS10605 () 2357063..2357971 - 909 WP_171463836.1 TauD/TfdA family dioxygenase -
H7K72_RS10610 () 2358842..2359126 + 285 WP_011084921.1 hypothetical protein -
H7K72_RS10615 () 2359362..2359865 - 504 WP_162494059.1 hypothetical protein -
H7K72_RS10620 () 2360088..2361047 + 960 Protein_2101 type IV secretory system conjugative DNA transfer family protein -
H7K72_RS10625 () 2361035..2361238 - 204 WP_014497739.1 hypothetical protein -
H7K72_RS10630 () 2361585..2362910 + 1326 WP_182869659.1 lysine N(6)-hydroxylase/L-ornithine N(5)-oxygenase family protein -
H7K72_RS10635 () 2362907..2364211 + 1305 WP_011084926.1 MFS transporter -
H7K72_RS10640 () 2364177..2364956 + 780 WP_011084927.1 phytanoyl-CoA dioxygenase family protein -
H7K72_RS10645 () 2364981..2365310 + 330 WP_011084928.1 cupin domain-containing protein -
H7K72_RS10650 () 2365312..2366889 + 1578 WP_011084929.1 class I tRNA ligase family protein -
H7K72_RS10655 () 2366909..2368042 + 1134 WP_011084930.1 PLP-dependent aminotransferase family protein -
H7K72_RS10660 () 2368449..2368616 + 168 WP_155256178.1 hypothetical protein -
H7K72_RS10665 () 2368971..2369591 - 621 WP_014497735.1 tyrosine-type recombinase/integrase -
H7K72_RS10670 () 2369591..2370811 - 1221 WP_182869661.1 tyrosine-type recombinase/integrase -
H7K72_RS10675 () 2371022..2371393 - 372 WP_157158178.1 transposase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Bradyrhizobium diazoefficiens USDA 110 Integrative and Conjugative Element TA20854 NC_004463 2049053..2310150 0.001