MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 28908 bp
Accession: NZ_AP022605 Location: 993486..1022393 Organism: Mycolicibacterium doricum strain JCM 12405 Replicon: chromosome
Accession: NZ_AP022605 Location: 993486..1022393 Organism: Mycolicibacterium doricum strain JCM 12405 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G6N07_RS04940 () | 989230..990258 | + | 1029 | WP_085190280.1 | PDZ domain-containing protein | - |
| G6N07_RS04945 () | 990343..993354 | + | 3012 | WP_085190019.1 | UPF0182 family protein | - |
| G6N07_RS04955 () | 994113..996563 | + | 2451 | WP_085190017.1 | AAA family ATPase | - |
| G6N07_RS04960 () | 996661..996984 | - | 324 | WP_085190015.1 | XRE family transcriptional regulator | Antitoxin Detail |
| G6N07_RS04965 () | 996987..997337 | - | 351 | WP_085190014.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| G6N07_RS04970 () | 997373..998716 | - | 1344 | WP_109749304.1 | Putative defective protein IntQ ; Integrase | Integrase |
| G6N07_RS04975 () | 998713..998898 | - | 186 | WP_082967898.1 | helix-turn-helix domain-containing protein | - |
| G6N07_RS04980 () | 999369..1000643 | + | 1275 | Protein_983 | relaxase domain-containing protein | - |
| G6N07_RS04985 () | 1000695..1001965 | + | 1271 | WP_099050197.1 | IS3 family transposase ISMyma10 | Transposase |
| G6N07_RS04990 () | 1002029..1002454 | + | 426 | WP_085190276.1 | AAA family ATPase | - |
| G6N07_RS04995 () | 1002393..1004225 | - | 1833 | WP_197913012.1 | IS1634 family transposase | - |
| G6N07_RS05000 () | 1004314..1005390 | + | 1077 | WP_085190012.1 | AAA family ATPase | - |
| G6N07_RS05005 () | 1005721..1006521 | + | 801 | WP_085190010.1 | IS5 family transposase ISRhosp9 | Transposase |
| G6N07_RS05010 () | 1006728..1007219 | - | 492 | WP_163784088.1 | hypothetical protein | - |
| G6N07_RS05015 () | 1007560..1008684 | + | 1125 | Protein_990 | ISL3 family transposase ISMsm4 | Transposase |
| G6N07_RS19870 () | 1008690..1008872 | + | 183 | WP_197913013.1 | ISL3 family transposase ISMsm4 | Transposase |
| G6N07_RS05020 () | 1009244..1010167 | - | 924 | WP_133055546.1 | hypothetical protein | - |
| G6N07_RS05025 () | 1010130..1010648 | - | 519 | WP_133055547.1 | hypothetical protein | - |
| G6N07_RS05030 () | 1011289..1013619 | + | 2331 | WP_085191698.1 | hypothetical protein | - |
| G6N07_RS05035 () | 1013821..1013949 | - | 129 | WP_197913014.1 | excalibur calcium-binding domain-containing protein | - |
| G6N07_RS05040 () | 1014545..1015201 | + | 657 | WP_085191706.1 | hypothetical protein | - |
| G6N07_RS05045 () | 1015250..1016719 | + | 1470 | WP_085191704.1 | IS481 family transposase ISGur11 | Transposase |
| G6N07_RS05050 () | 1016716..1017531 | + | 816 | WP_085191700.1 | hypothetical protein | VF |
| G6N07_RS05055 () | 1017597..1017926 | - | 330 | WP_133055549.1 | hypothetical protein | - |
| G6N07_RS05060 () | 1018108..1018977 | - | 870 | WP_133055550.1 | hypothetical protein | - |
| G6N07_RS05065 () | 1019008..1019658 | - | 651 | WP_085191702.1 | hypothetical protein | - |
| G6N07_RS05070 () | 1019658..1020182 | + | 525 | Protein_1002 | IS3 family transposase ISMsm7 | Transposase |
| G6N07_RS05075 () | 1020455..1021769 | + | 1315 | Protein_1003 | ISL3 family transposase ISMsm4 | Transposase |
| G6N07_RS05085 () | 1024910..1025800 | - | 891 | WP_133055586.1 | hypothetical protein | - |
| G6N07_RS05090 () | 1025810..1027387 | - | 1578 | WP_085192939.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|