MGE detailed information
MGE type: Genomic_island MGE length: 18947 bp
Accession: NZ_AP022575 Location: 2107629..2126575 Organism: Mycobacterium shinjukuense strain JCM 14233 Replicon: chromosome
Accession: NZ_AP022575 Location: 2107629..2126575 Organism: Mycobacterium shinjukuense strain JCM 14233 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G6N20_RS09270 () | 2103483..2104145 | + | 663 | WP_083048485.1 | hypothetical protein | - |
| G6N20_RS09275 () | 2104142..2104222 | + | 81 | Protein_1834 | type II toxin-antitoxin system VapB family antitoxin | - |
| G6N20_RS09280 () | 2104308..2104445 | + | 138 | WP_158084757.1 | hypothetical protein | - |
| G6N20_RS09285 () | 2104442..2105101 | + | 660 | WP_083048406.1 | hypothetical protein | - |
| G6N20_RS09290 () | 2105098..2105760 | + | 663 | WP_083048482.1 | hypothetical protein | - |
| G6N20_RS09295 () | 2105921..2106133 | + | 213 | WP_083048404.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| G6N20_RS09300 () | 2106133..2106546 | + | 414 | WP_083048481.1 | PIN domain nuclease | - |
| G6N20_RS09305 () | 2106585..2106842 | + | 258 | WP_083048479.1 | ribbon-helix-helix domain-containing protein | - |
| G6N20_RS09310 () | 2106839..2107216 | + | 378 | WP_083048403.1 | type II toxin-antitoxin system VapC family toxin | - |
| G6N20_RS09315 () | 2107232..2107609 | - | 378 | WP_083048401.1 | hypothetical protein | - |
| G6N20_RS09320 () | 2107629..2108021 | - | 393 | WP_083048400.1 | PIN domain-containing protein | Toxin Detail |
| G6N20_RS09325 () | 2108018..2108239 | - | 222 | WP_083048399.1 | type II toxin-antitoxin system antitoxin VapB20 | Antitoxin Detail |
| G6N20_RS09330 () | 2109185..2109997 | - | 813 | WP_163662916.1 | hypothetical protein | VF |
| G6N20_RS09335 () | 2109994..2111401 | - | 1408 | Protein_1846 | DDE-type integrase/transposase/recombinase | - |
| G6N20_RS09340 () | 2111456..2112082 | - | 627 | WP_083052646.1 | hypothetical protein | - |
| G6N20_RS09345 () | 2117639..2117941 | - | 303 | WP_083051489.1 | CRISPR-associated endonuclease Cas2 | - |
| G6N20_RS09350 () | 2117938..2119533 | - | 1596 | WP_083051492.1 | CRISPR-associated endonuclease Cas4/Cas1 | - |
| G6N20_RS09355 () | 2119530..2120555 | - | 1026 | WP_142272181.1 | hypothetical protein | - |
| G6N20_RS09360 () | 2120552..2123371 | - | 2820 | WP_142272182.1 | type I-U CRISPR-associated helicase/endonuclease Cas3 | - |
| G6N20_RS09365 () | 2123371..2124930 | - | 1560 | WP_083051498.1 | type I-U CRISPR-associated protein Cas5/Cas6 | - |
| G6N20_RS09370 () | 2124935..2126140 | - | 1206 | WP_083051501.1 | type I-U CRISPR-associated protein Cas7 | - |
| G6N20_RS09375 () | 2126747..2127193 | - | 447 | WP_083051504.1 | A24 family peptidase | - |
| G6N20_RS09380 () | 2127205..2128032 | - | 828 | WP_083051507.1 | shikimate dehydrogenase | - |
| G6N20_RS09385 () | 2128010..2129251 | - | 1242 | WP_083051510.1 | endolytic transglycosylase MltG | - |
| G6N20_RS09390 () | 2129244..2129762 | - | 519 | WP_083051513.1 | Holliday junction resolvase RuvX | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|