MGE detailed information
MGE type: Genomic_island MGE length: 55409 bp
Accession: NZ_AP022570 Location: 2016606..2072014 Organism: Mycolicibacterium poriferae strain JCM 12603 Replicon: chromosome
Accession: NZ_AP022570 Location: 2016606..2072014 Organism: Mycolicibacterium poriferae strain JCM 12603 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G6N39_RS09625 () | 2011615..2012589 | + | 975 | WP_163673407.1 | D-2-hydroxyacid dehydrogenase | - |
| G6N39_RS09630 () | 2012604..2014013 | + | 1410 | WP_197746591.1 | amidase | - |
| G6N39_RS09635 () | 2014010..2014516 | + | 507 | WP_152516128.1 | DUF3830 family protein | - |
| G6N39_RS09640 () | 2014504..2015793 | - | 1290 | WP_163673409.1 | acyltransferase | - |
| G6N39_RS09645 () | 2016033..2016374 | + | 342 | WP_163673410.1 | hypothetical protein | - |
| G6N39_RS09650 () | 2016606..2017943 | + | 1338 | WP_163673411.1 | UDP-glucose 6-dehydrogenase | VF |
| G6N39_RS09655 () | 2018021..2018299 | - | 279 | WP_163673412.1 | acyl-CoA carboxylase subunit epsilon | - |
| G6N39_RS09660 () | 2018349..2019974 | - | 1626 | WP_163673413.1 | acyl-CoA carboxylase subunit beta | - |
| G6N39_RS09665 () | 2020459..2020887 | + | 429 | WP_163673414.1 | hypothetical protein | - |
| G6N39_RS09670 () | 2021105..2022823 | + | 1719 | WP_163680013.1 | DUF4012 domain-containing protein | - |
| G6N39_RS09675 () | 2022858..2024357 | + | 1500 | WP_163673415.1 | Putative tyrosine-protein kinase YveL | VF |
| G6N39_RS09680 () | 2024720..2026447 | + | 1728 | WP_163673416.1 | heparinase II/III family protein | - |
| G6N39_RS09685 () | 2026986..2028245 | + | 1260 | WP_163673417.1 | lipopolysaccharide biosynthesis protein | - |
| G6N39_RS09690 () | 2028445..2029389 | + | 945 | WP_163673418.1 | sulfotransferase | - |
| G6N39_RS09695 () | 2029434..2030686 | + | 1253 | Protein_1925 | transposase | - |
| G6N39_RS09700 () | 2030685..2031579 | + | 895 | Protein_1926 | IS1634 family transposase ISMsm6 | Transposase |
| G6N39_RS09705 () | 2032147..2033004 | + | 858 | Protein_1927 | IS3 family transposase | - |
| G6N39_RS09710 () | 2033455..2034429 | + | 975 | WP_163673419.1 | sulfotransferase | - |
| G6N39_RS09715 () | 2034685..2036022 | + | 1338 | WP_163673420.1 | oligosaccharide repeat unit polymerase | - |
| G6N39_RS09720 () | 2036470..2038105 | + | 1636 | Protein_1930 | IS1634 family transposase | - |
| G6N39_RS09725 () | 2038623..2039897 | + | 1275 | WP_163673421.1 | ISL3 family transposase ISAar39 | Transposase |
| G6N39_RS09730 () | 2039967..2041019 | + | 1053 | WP_163673422.1 | IS110 family transposase IS1547 | Transposase |
| G6N39_RS09735 () | 2041252..2042556 | - | 1305 | WP_163673423.1 | glycosyltransferase family 4 protein | - |
| G6N39_RS09740 () | 2042598..2043857 | - | 1260 | WP_163673424.1 | GDP-mannose 6-dehydrogenase | VF |
| G6N39_RS09745 () | 2044755..2045552 | + | 798 | WP_163673425.1 | heparin lyase I family protein | - |
| G6N39_RS09750 () | 2045782..2046915 | - | 1134 | WP_163673426.1 | glycosyltransferase family 4 protein | - |
| G6N39_RS09755 () | 2047005..2047946 | - | 942 | WP_163673427.1 | SDR family oxidoreductase | - |
| G6N39_RS09760 () | 2048268..2049644 | + | 1377 | WP_163673428.1 | UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase | VF |
| G6N39_RS09765 () | 2049749..2050288 | + | 540 | WP_163680016.1 | low molecular weight phosphatase family protein | - |
| G6N39_RS09770 () | 2050413..2051510 | - | 1098 | WP_163673429.1 | glycoside hydrolase family 6 protein | - |
| G6N39_RS09775 () | 2051585..2052631 | - | 1047 | WP_163673430.1 | O-antigen ligase family protein | - |
| G6N39_RS09780 () | 2052621..2052995 | + | 375 | WP_163673431.1 | hypothetical protein | - |
| G6N39_RS09785 () | 2053028..2054407 | + | 1380 | WP_163673432.1 | lipopolysaccharide biosynthesis protein | - |
| G6N39_RS09790 () | 2054482..2055489 | + | 1008 | WP_163673433.1 | hypothetical protein | - |
| G6N39_RS09795 () | 2055477..2056325 | - | 849 | WP_163673434.1 | glycosyltransferase family 2 protein | - |
| G6N39_RS09800 () | 2056322..2057053 | - | 732 | WP_163673435.1 | WecB/TagA/CpsF family glycosyltransferase | - |
| G6N39_RS09805 () | 2057108..2058241 | - | 1134 | WP_163673436.1 | hypothetical protein | - |
| G6N39_RS09810 () | 2058739..2059419 | - | 681 | WP_163673437.1 | class I SAM-dependent methyltransferase | - |
| G6N39_RS09815 () | 2059782..2061797 | + | 2016 | WP_163673438.1 | hypothetical protein | - |
| G6N39_RS09820 () | 2061845..2062810 | + | 966 | WP_163673439.1 | NAD(P)-dependent oxidoreductase | - |
| G6N39_RS09825 () | 2063150..2063668 | + | 519 | WP_163673440.1 | PH domain-containing protein | - |
| G6N39_RS09830 () | 2064026..2064721 | + | 696 | WP_163680018.1 | GAF domain-containing protein | - |
| G6N39_RS09835 () | 2064874..2066409 | + | 1536 | WP_163673441.1 | UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase | VF |
| G6N39_RS09840 () | 2066413..2067066 | + | 654 | WP_163673442.1 | undecaprenyl diphosphate synthase family protein | - |
| G6N39_RS09845 () | 2067075..2068472 | + | 1398 | WP_163673443.1 | FAD-dependent oxidoreductase | - |
| G6N39_RS09850 () | 2068538..2068774 | + | 237 | WP_152516161.1 | antitoxin | - |
| G6N39_RS09855 () | 2068887..2069549 | - | 663 | WP_163673444.1 | GtrA family protein | - |
| G6N39_RS09860 () | 2069692..2070852 | + | 1161 | WP_163680021.1 | 5-(carboxyamino)imidazole ribonucleotide synthase | - |
| G6N39_RS09865 () | 2070849..2071349 | + | 501 | WP_179967588.1 | 5-(carboxyamino)imidazole ribonucleotide mutase | - |
| G6N39_RS09870 () | 2071407..2071748 | - | 342 | WP_163673446.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| G6N39_RS09875 () | 2071745..2071981 | - | 237 | WP_163673447.1 | DUF2191 domain-containing protein | Antitoxin Detail |
| G6N39_RS09880 () | 2072066..2072749 | - | 684 | WP_163673448.1 | GntR family transcriptional regulator | - |
| G6N39_RS09885 () | 2072835..2073617 | + | 783 | WP_163673449.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| G6N39_RS09890 () | 2073614..2074411 | + | 798 | WP_163673450.1 | carbon-nitrogen hydrolase family protein | - |
| G6N39_RS09895 () | 2074413..2075483 | + | 1071 | WP_163673451.1 | TRAP transporter substrate-binding protein DctP | - |
| G6N39_RS09900 () | 2075480..2075998 | + | 519 | WP_163673452.1 | TRAP transporter small permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|