MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 46229 bp
Accession: NZ_AP022552 Location: 1..46229 Organism: Escherichia coli strain THO-015 Replicon: plasmid pTHO-015-3
Accession: NZ_AP022552 Location: 1..46229 Organism: Escherichia coli strain THO-015 Replicon: plasmid pTHO-015-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JLF69_RS25240 () | 102..353 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| JLF69_RS25245 () | 343..624 | + | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JLF69_RS25250 () | 770..1093 | + | 324 | WP_001181903.1 | hypothetical protein | - |
| JLF69_RS25255 () | 1138..1383 | + | 246 | WP_001550454.1 | hypothetical protein | - |
| JLF69_RS25260 () | 1373..1588 | + | 216 | WP_001180116.1 | hypothetical protein | - |
| JLF69_RS25265 () | 1681..2010 | + | 330 | WP_000866648.1 | hypothetical protein | - |
| JLF69_RS25270 () | 2053..2232 | + | 180 | WP_000439078.1 | hypothetical protein | - |
| JLF69_RS25275 () | 2302..2451 | + | 150 | WP_000003880.1 | hypothetical protein | - |
| JLF69_RS25280 () | 2464..2736 | + | 273 | WP_000160399.1 | hypothetical protein | - |
| JLF69_RS25285 () | 2993..3067 | + | 75 | Protein_9 | DNA distortion polypeptide 3 | - |
| JLF69_RS25290 () | 3062..3607 | + | 546 | WP_000757693.1 | hypothetical protein | - |
| JLF69_RS25295 () | 3610..4776 | + | 1167 | WP_000539529.1 | hypothetical protein | Relaxase |
| JLF69_RS25300 () | 5129..5647 | + | 519 | WP_001446885.1 | transcription termination factor NusG | - |
| JLF69_RS25305 () | 5577..5789 | + | 213 | WP_000125172.1 | hypothetical protein | - |
| JLF69_RS25310 () | 5822..6469 | + | 648 | WP_000953529.1 | Type IV secretion system protein virB1 | VF |
| JLF69_RS25315 () | 6447..6743 | + | 297 | WP_000916182.1 | TrbC/VirB2 family protein | - |
| JLF69_RS25320 () | 6762..9515 | + | 2754 | WP_200930522.1 | Type IV secretion system protein virB4 | VF |
| JLF69_RS25325 () | 9526..10284 | + | 759 | WP_000744200.1 | pilus assembly protein | - |
| JLF69_RS25330 () | 10285..10572 | + | 288 | WP_000835347.1 | EexN family lipoprotein | - |
| JLF69_RS25335 () | 10581..11711 | + | 1131 | WP_000524912.1 | type IV secretion system protein | - |
| JLF69_RS25340 () | 11956..12669 | + | 714 | WP_000394614.1 | type IV secretion system protein | - |
| JLF69_RS25345 () | 12674..13603 | + | 930 | WP_052938685.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| JLF69_RS25350 () | 13600..14805 | + | 1206 | WP_000139139.1 | Type IV secretion system protein virB10 | VF |
| JLF69_RS25355 () | 14807..15838 | + | 1032 | WP_096939274.1 | Type IV secretion system protein VirB11 | VF |
| JLF69_RS25360 () | 15841..17676 | + | 1836 | WP_000053820.1 | type IV secretory system conjugative DNA transfer family protein | - |
| JLF69_RS25365 () | 17673..18086 | + | 414 | WP_200930523.1 | conjugal transfer protein | - |
| JLF69_RS25370 () | 18083..18385 | + | 303 | WP_000820908.1 | IncN plasmid KikA protein | - |
| JLF69_RS25375 () | 18486..19991 | + | 1506 | WP_200930524.1 | YadA-like family protein | - |
| JLF69_RS25380 () | 20020..20247 | + | 228 | WP_000803716.1 | hypothetical protein | - |
| JLF69_RS25385 () | 20327..20836 | + | 510 | WP_200930525.1 | thermonuclease family protein | - |
| JLF69_RS25390 () | 20918..22180 | + | 1263 | WP_200930526.1 | AAA family ATPase | - |
| JLF69_RS25395 () | 22184..22759 | + | 576 | WP_200930527.1 | DNA topoisomerase III | - |
| JLF69_RS25400 () | 22764..24917 | + | 2154 | WP_200930528.1 | type IA DNA topoisomerase | - |
| JLF69_RS25405 () | 24914..25120 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| JLF69_RS25410 () | 25136..25597 | + | 462 | WP_001293131.1 | H-NS histone family protein | - |
| JLF69_RS25415 () | 25648..25911 | + | 264 | WP_200930511.1 | methionyl-tRNA formyltransferase | - |
| JLF69_RS25420 () | 26087..27412 | - | 1326 | WP_200930512.1 | hypothetical protein | - |
| JLF69_RS25425 () | 27463..28254 | - | 792 | WP_200930529.1 | hypothetical protein | - |
| JLF69_RS25430 () | 28423..28659 | - | 237 | WP_000887751.1 | hypothetical protein | - |
| JLF69_RS25435 () | 29143..29322 | + | 180 | WP_000347021.1 | hypothetical protein | - |
| JLF69_RS25440 () | 29436..30080 | - | 645 | WP_000203200.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| JLF69_RS25445 () | 30375..30995 | + | 621 | WP_200930513.1 | ParA family protein | - |
| JLF69_RS25450 () | 31047..31277 | + | 231 | WP_112909416.1 | DNA partition complex ParG | - |
| JLF69_RS25455 () | 31293..31598 | + | 306 | WP_200930514.1 | CopG family transcriptional regulator | - |
| JLF69_RS25460 () | 32014..32202 | + | 189 | Protein_44 | YcxB family protein | - |
| JLF69_RS25465 () | 32375..32608 | + | 234 | WP_200930530.1 | YcxB family protein | - |
| JLF69_RS25470 () | 32625..32795 | + | 171 | WP_200930531.1 | hypothetical protein | - |
| JLF69_RS25480 () | 34098..34394 | - | 297 | WP_200930515.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| JLF69_RS25485 () | 34504..38724 | - | 4221 | WP_200930516.1 | putative autotransporter | VF |
| JLF69_RS25490 () | 38708..39937 | - | 1230 | WP_105465345.1 | autotransporter strand-loop-strand O-heptosyltransferase | - |
| JLF69_RS25495 () | 40371..41909 | - | 1539 | Protein_51 | IS66 family transposase ISEc8 | Transposase |
| JLF69_RS25500 () | 41959..42306 | - | 348 | WP_200930517.1 | IS66 family transposase ISEc8 | Transposase |
| JLF69_RS25505 () | 42303..42683 | - | 381 | WP_200930518.1 | IS66 family transposase ISEc8 | Transposase |
| JLF69_RS25510 () | 42798..43392 | + | 595 | Protein_54 | hypothetical protein | - |
| JLF69_RS25515 () | 43402..43827 | - | 426 | WP_200930519.1 | DUF2726 domain-containing protein | - |
| JLF69_RS25520 () | 43946..44389 | - | 444 | WP_200930520.1 | hypothetical protein | - |
| JLF69_RS25525 () | 44382..45269 | - | 888 | WP_200930521.1 | replication initiation protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|