MGE detailed information
MGE type: Genomic_island MGE length: 20421 bp
Accession: NZ_AP022549 Location: 4231337..4251757 Organism: Escherichia coli strain THO-015 Replicon: chromosome
Accession: NZ_AP022549 Location: 4231337..4251757 Organism: Escherichia coli strain THO-015 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JLF69_RS20555 () | 4228944..4229669 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| JLF69_RS20560 () | 4229706..4230245 | - | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| JLF69_RS20565 () | 4230310..4230858 | - | 549 | WP_000695543.1 | type 1 fimbrial major subunit FimA | - |
| JLF69_RS20570 () | 4231337..4231933 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerD | VF |
| JLF69_RS20575 () | 4232411..4232818 | - | 408 | Protein_4035 | type 1 fimbria switch DNA invertase FimB | - |
| JLF69_RS20580 () | 4232918..4233436 | + | 519 | WP_000115885.1 | hypothetical protein | VF |
| JLF69_RS20585 () | 4233455..4234675 | + | 1221 | WP_000343765.1 | ISL3 family transposase ISEc53 | Transposase |
| JLF69_RS20590 () | 4234706..4234903 | - | 198 | Protein_4038 | type 1 fimbria switch DNA invertase FimB | - |
| JLF69_RS20595 () | 4236357..4237073 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| JLF69_RS20600 () | 4237093..4238199 | + | 1107 | WP_001295733.1 | N-acetylneuraminate epimerase | - |
| JLF69_RS20605 () | 4238263..4239243 | + | 981 | WP_000991462.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| JLF69_RS20610 () | 4239826..4240932 | - | 1107 | Protein_4042 | DNA helicase | - |
| JLF69_RS20615 () | 4240995..4242142 | + | 1148 | WP_085949154.1 | IS3 family transposase ISEc52 | Transposase |
| JLF69_RS20620 () | 4242175..4242339 | + | 165 | Protein_4044 | GNAT family N-acetyltransferase | - |
| JLF69_RS20625 () | 4242716..4242973 | + | 258 | WP_001054379.1 | YjhX family toxin | Toxin Detail |
| JLF69_RS20630 () | 4242985..4243536 | + | 552 | WP_000123957.1 | N-acetyltransferase | Antitoxin Detail |
| JLF69_RS20635 () | 4243588..4244334 | + | 747 | WP_000354249.1 | class I SAM-dependent methyltransferase | - |
| JLF69_RS20640 () | 4244462..4244722 | + | 261 | WP_000077645.1 | hypothetical protein | - |
| JLF69_RS20645 () | 4244760..4244876 | + | 117 | Protein_4049 | VOC family protein | - |
| JLF69_RS20650 () | 4245121..4246242 | + | 1122 | WP_000010833.1 | M42 family metallopeptidase | - |
| JLF69_RS20655 () | 4246239..4246517 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| JLF69_RS20660 () | 4246529..4247842 | + | 1314 | WP_000460845.1 | galactitol-specific PTS transporter subunit IIC | - |
| JLF69_RS20665 () | 4247855..4248661 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| JLF69_RS20670 () | 4248792..4249223 | + | 432 | WP_000606405.1 | PTS sugar transporter subunit IIA | - |
| JLF69_RS20675 () | 4249235..4249867 | + | 633 | WP_000600624.1 | ribulose-phosphate 3 epimerase family protein | - |
| JLF69_RS20680 () | 4249884..4250666 | + | 783 | WP_000082779.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| JLF69_RS20685 () | 4250969..4251757 | + | 789 | WP_000251799.1 | IclR family transcriptional regulator | - |
| JLF69_RS20690 () | 4251762..4252667 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| JLF69_RS20695 () | 4252678..4254645 | + | 1968 | WP_000116325.1 | xylonate dehydratase YjhG | - |
| JLF69_RS20700 () | 4254752..4256101 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|